RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 C1QTNF4Q9BXJ3 329 aa8.52□□□□□ -1.05
CARMIL3-204ENST00000561354 CLEC5AQ9NY25 188 aa8.52□□□□□ -1.05
CARMIL3-204ENST00000561354 OR5AC2Q9NZP5 309 aa8.52□□□□□ -1.05
CARMIL3-204ENST00000561354 U3KQE9 123 aa8.52□□□□□ -1.05
CARMIL3-204ENST00000561354 DNAH6Q9C0G6 4158 aa8.51□□□□□ -1.05
CARMIL3-204ENST00000561354 HELTA6NFD8 242 aa8.51□□□□□ -1.05
CARMIL3-204ENST00000561354 PRSS29PA6NIE9 313 aa8.51□□□□□ -1.05
CARMIL3-204ENST00000561354 SCGB1D2O95969 90 aa8.51□□□□□ -1.05
CARMIL3-204ENST00000561354 IGKV1-17P01599 117 aa8.51□□□□□ -1.05
CARMIL3-204ENST00000561354 MBPP02686 304 aaPredicted RBP8.51□□□□□ -1.05
CARMIL3-204ENST00000561354 NMBP08949 121 aa8.51□□□□□ -1.05
CARMIL3-204ENST00000561354 NKX2-1P43699 371 aaPredicted RBP8.51□□□□□ -1.05
CARMIL3-204ENST00000561354 AKR1C2P52895 323 aa8.51□□□□□ -1.05
CARMIL3-204ENST00000561354 NUTF2P61970 127 aaKnown RBP8.51□□□□□ -1.05
CARMIL3-204ENST00000561354 BSXQ3C1V8 233 aa8.51□□□□□ -1.05
CARMIL3-204ENST00000561354 BAP18Q8IXM2 172 aa8.51□□□□□ -1.05
CARMIL3-204ENST00000561354 RRNAD1Q96FB5 475 aaKnown RBP8.51□□□□□ -1.05
CARMIL3-204ENST00000561354 NDUFAF3Q9BU61 184 aa8.51□□□□□ -1.05
CARMIL3-204ENST00000561354 SEPSECSQ9HD40 501 aaKnown RBP8.51□□□□□ -1.05
CARMIL3-204ENST00000561354 PFDN2Q9UHV9 154 aa8.51□□□□□ -1.05
CARMIL3-204ENST00000561354 CELA1Q9UNI1 258 aa8.51□□□□□ -1.05
CARMIL3-204ENST00000561354 LSM5Q9Y4Y9 91 aaKnown RBP8.51□□□□□ -1.05
CARMIL3-204ENST00000561354 BORCS7-ASMTA0A0B4J1R7 106 aa8.5□□□□□ -1.05
CARMIL3-204ENST00000561354 RTL8CO15255 209 aa8.5□□□□□ -1.05
CARMIL3-204ENST00000561354 NPY1RP25929 384 aa8.5□□□□□ -1.05
CARMIL3-204ENST00000561354 HOXA1P49639 335 aaPredicted RBP8.5□□□□□ -1.05
CARMIL3-204ENST00000561354 LGALS9BQ3B8N2 356 aa8.5□□□□□ -1.05
CARMIL3-204ENST00000561354 TIGITQ495A1 244 aa8.5□□□□□ -1.05
CARMIL3-204ENST00000561354 PSMG4Q5JS54 123 aa8.5□□□□□ -1.05
CARMIL3-204ENST00000561354 C16orf54Q6UWD8 224 aa8.5□□□□□ -1.05
CARMIL3-204ENST00000561354 COMMD7Q86VX2 200 aa8.5□□□□□ -1.05
CARMIL3-204ENST00000561354 RNASE11Q8TAA1 199 aaKnown RBP8.5□□□□□ -1.05
CARMIL3-204ENST00000561354 GLMPQ8WWB7 406 aa8.5□□□□□ -1.05
CARMIL3-204ENST00000561354 SLC25A31Q9H0C2 315 aa8.5□□□□□ -1.05
CARMIL3-204ENST00000561354 ENY2Q9NPA8 101 aa8.5□□□□□ -1.05
CARMIL3-204ENST00000561354 FAM90A26D6RGX4 464 aa8.49□□□□□ -1.05
CARMIL3-204ENST00000561354 VAMP2P63027 116 aa8.49□□□□□ -1.05
CARMIL3-204ENST00000561354 BAXQ07812 192 aa8.49□□□□□ -1.05
CARMIL3-204ENST00000561354 AARDQ4LEZ3 155 aa8.49□□□□□ -1.05
CARMIL3-204ENST00000561354 OR1S2Q8NGQ3 325 aa8.49□□□□□ -1.05
CARMIL3-204ENST00000561354 Q8WTZ3 238 aa8.49□□□□□ -1.05
CARMIL3-204ENST00000561354 RNF141Q8WVD5 230 aa8.49□□□□□ -1.05
CARMIL3-204ENST00000561354 CYTL1Q9NRR1 136 aa8.49□□□□□ -1.05
CARMIL3-204ENST00000561354 CACFD1Q9UGQ2 172 aa8.49□□□□□ -1.05
CARMIL3-204ENST00000561354 WRBO00258 174 aa8.48□□□□□ -1.05
CARMIL3-204ENST00000561354 PITX3O75364 302 aa8.48□□□□□ -1.05
CARMIL3-204ENST00000561354 IGLC1P0CG04 106 aa8.48□□□□□ -1.05
CARMIL3-204ENST00000561354 SPCS3P61009 180 aa8.48□□□□□ -1.05
CARMIL3-204ENST00000561354 YPEL3P61236 119 aaPredicted RBP8.48□□□□□ -1.05
CARMIL3-204ENST00000561354 SNRPD3P62318 126 aaKnown RBP8.48□□□□□ -1.05
CARMIL3-204ENST00000561354 ID3Q02535 119 aa8.48□□□□□ -1.05
CARMIL3-204ENST00000561354 EIF4E3Q8N5X7 224 aaKnown RBP8.48□□□□□ -1.05
CARMIL3-204ENST00000561354 OR52E5Q8NH55 327 aa8.48□□□□□ -1.05
CARMIL3-204ENST00000561354 NEU1Q99519 415 aa8.48□□□□□ -1.05
CARMIL3-204ENST00000561354 SCRT1Q9BWW7 348 aa8.48□□□□□ -1.05
CARMIL3-204ENST00000561354 C11orf1Q9H5F2 150 aa8.48□□□□□ -1.05
CARMIL3-204ENST00000561354 LYRM2Q9NU23 88 aaPredicted RBP8.48□□□□□ -1.05
CARMIL3-204ENST00000561354 RCL1Q9Y2P8 373 aaKnown RBP8.48□□□□□ -1.05
CARMIL3-204ENST00000561354 A0A0G2JRQ6 117 aa8.47□□□□□ -1.05
CARMIL3-204ENST00000561354 H3BMM0 161 aa8.47□□□□□ -1.05
CARMIL3-204ENST00000561354 M0R2N4 97 aa8.47□□□□□ -1.05
CARMIL3-204ENST00000561354 TAS2R30P59541 319 aa8.47□□□□□ -1.05
CARMIL3-204ENST00000561354 ZNF266Q14584 549 aa8.47□□□□□ -1.05
CARMIL3-204ENST00000561354 ZNF705AQ6ZN79 300 aaPredicted RBP8.47□□□□□ -1.05
CARMIL3-204ENST00000561354 Q6ZRM9 215 aa8.47□□□□□ -1.05
CARMIL3-204ENST00000561354 SAT2Q96F10 170 aaPredicted RBP8.47□□□□□ -1.05
CARMIL3-204ENST00000561354 FAM210BQ96KR6 192 aa8.47□□□□□ -1.05
CARMIL3-204ENST00000561354 NRN1Q9NPD7 142 aa8.47□□□□□ -1.05
CARMIL3-204ENST00000561354 XCL2Q9UBD3 114 aa8.47□□□□□ -1.05
CARMIL3-204ENST00000561354 MUC4Q99102 2169 aa8.46□□□□□ -1.05
CARMIL3-204ENST00000561354 FAT2Q9NYQ8 4349 aa8.46□□□□□ -1.05
CARMIL3-204ENST00000561354 TMEM189A5PLL7 270 aa8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 SMIM9A6NGZ8 99 aa8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 ZNF705FA8MVS1 300 aaPredicted RBP8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 BUB3O43684 328 aa8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 MED6O75586 246 aa8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 IFNA10P01566 189 aa8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 ZNF705DP0CH99 300 aaPredicted RBP8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 ZNF705BP0CI00 300 aaPredicted RBP8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 SPART-AS1P0CW21 52 aa8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 HLA-DRB4P13762 266 aa8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 OR10J1P30954 320 aa8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 RND2P52198 227 aa8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 USF2Q15853 346 aaPredicted RBP8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 C2orf83Q53S99 150 aa8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 Q6ZR54 194 aa8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 RNASEH2CQ8TDP1 164 aaKnown RBP8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 GPR146Q96CH1 333 aa8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 ARV1Q9H2C2 271 aa8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 HLA-DRB4X5D2U9 266 aa8.46□□□□□ -1.06
CARMIL3-204ENST00000561354 DNAH2Q9P225 4427 aa8.45□□□□□ -1.06
CARMIL3-204ENST00000561354 SSSCA1O60232 199 aa8.45□□□□□ -1.06
CARMIL3-204ENST00000561354 IL4P05112 153 aa8.45□□□□□ -1.06
CARMIL3-204ENST00000561354 SEC11BP0C7V7 166 aa8.45□□□□□ -1.06
CARMIL3-204ENST00000561354 RAB5CP51148 216 aa8.45□□□□□ -1.06
CARMIL3-204ENST00000561354 ETFRF1Q6IPR1 90 aa8.45□□□□□ -1.06
CARMIL3-204ENST00000561354 UQCC3Q6UW78 93 aa8.45□□□□□ -1.06
CARMIL3-204ENST00000561354 SIGLEC15Q6ZMC9 328 aa8.45□□□□□ -1.06
CARMIL3-204ENST00000561354 STX12Q86Y82 276 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms