RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 TNCP24821 2201 aa8.06□□□□□ -1.12
TPM1-229ENST00000561242 IGKV1OR2-108A0A075B7D4 117 aa8.05□□□□□ -1.12
TPM1-229ENST00000561242 K7EIL1 84 aa8.05□□□□□ -1.12
TPM1-229ENST00000561242 OR7C2O60412 319 aa8.05□□□□□ -1.12
TPM1-229ENST00000561242 ZNF688P0C7X2 276 aa8.05□□□□□ -1.12
TPM1-229ENST00000561242 EDN2P20800 178 aa8.05□□□□□ -1.12
TPM1-229ENST00000561242 CSN1S1P47710 185 aa8.05□□□□□ -1.12
TPM1-229ENST00000561242 SPATA31B1PQ5VZV4 182 aa8.05□□□□□ -1.12
TPM1-229ENST00000561242 ADAMTSL5Q6ZMM2 481 aa8.05□□□□□ -1.12
TPM1-229ENST00000561242 Q6ZNX1 250 aa8.05□□□□□ -1.12
TPM1-229ENST00000561242 IQCF2Q8IXL9 164 aa8.05□□□□□ -1.12
TPM1-229ENST00000561242 GLMPQ8WWB7 406 aa8.05□□□□□ -1.12
TPM1-229ENST00000561242 FAM110AQ9BQ89 295 aa8.05□□□□□ -1.12
TPM1-229ENST00000561242 PARD6GQ9BYG4 376 aaPredicted RBP8.05□□□□□ -1.12
TPM1-229ENST00000561242 SEPSECSQ9HD40 501 aaKnown RBP8.05□□□□□ -1.12
TPM1-229ENST00000561242 TNFSF18Q9UNG2 199 aa8.05□□□□□ -1.12
TPM1-229ENST00000561242 U3KQE9 123 aa8.05□□□□□ -1.12
TPM1-229ENST00000561242 H3BRN7 92 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 TEX46H3BTG2 121 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 UBE2CO00762 179 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 ISLRO14498 428 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 SPP1P10451 314 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 PSMB3P49720 205 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 SERF2P84101 59 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 PSG9Q00887 426 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 KHDC3LQ587J8 217 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 LEMD1Q68G75 181 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 LCN15Q6UWW0 184 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 ZNF738Q8NE65 137 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 OR10G4Q8NGN3 311 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 OR10G9Q8NGN4 311 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 OR10G7Q8NGN6 311 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 OR2G3Q8NGZ4 309 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 STOML3Q8TAV4 291 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 HYLS1Q96M11 299 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 UHRF2Q96PU4 802 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 SLC50A1Q9BRV3 221 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 SCRT1Q9BWW7 348 aa8.04□□□□□ -1.12
TPM1-229ENST00000561242 ZNF471Q9BX82 626 aaPredicted RBP8.04□□□□□ -1.12
TPM1-229ENST00000561242 ACTR3CQ9C0K3 210 aaPredicted RBP8.04□□□□□ -1.12
TPM1-229ENST00000561242 HMSDA8MTL9 139 aa8.03□□□□□ -1.12
TPM1-229ENST00000561242 DUSP14O95147 198 aaKnown RBP8.03□□□□□ -1.12
TPM1-229ENST00000561242 FRMD6-AS1P0C7T7 363 aa8.03□□□□□ -1.12
TPM1-229ENST00000561242 RPL35AP18077 110 aaKnown RBP8.03□□□□□ -1.12
TPM1-229ENST00000561242 CXCL2P19875 107 aa8.03□□□□□ -1.12
TPM1-229ENST00000561242 M6PRP20645 277 aa8.03□□□□□ -1.12
TPM1-229ENST00000561242 RAB2AP61019 212 aa8.03□□□□□ -1.12
TPM1-229ENST00000561242 ZFP69Q49AA0 526 aa8.03□□□□□ -1.12
TPM1-229ENST00000561242 TMEM41BQ5BJD5 291 aa8.03□□□□□ -1.12
TPM1-229ENST00000561242 FAM90A2PQ658T7 463 aa8.03□□□□□ -1.12
TPM1-229ENST00000561242 ZNF414Q96IQ9 312 aa8.03□□□□□ -1.12
TPM1-229ENST00000561242 ASCL2Q99929 193 aa8.03□□□□□ -1.12
TPM1-229ENST00000561242 B9D2Q9BPU9 175 aa8.03□□□□□ -1.12
TPM1-229ENST00000561242 C1QTNF4Q9BXJ3 329 aa8.03□□□□□ -1.12
TPM1-229ENST00000561242 SLC25A32Q9H2D1 315 aa8.03□□□□□ -1.12
TPM1-229ENST00000561242 OR51M1Q9H341 326 aa8.03□□□□□ -1.12
TPM1-229ENST00000561242 FUT9Q9Y231 359 aa8.03□□□□□ -1.12
TPM1-229ENST00000561242 STAB1Q9NY15 2570 aa8.02□□□□□ -1.13
TPM1-229ENST00000561242 SMLR1H3BR10 107 aa8.02□□□□□ -1.13
TPM1-229ENST00000561242 K7EQG2 157 aa8.02□□□□□ -1.13
TPM1-229ENST00000561242 TPT1P13693 172 aaKnown RBP8.02□□□□□ -1.13
TPM1-229ENST00000561242 PRR20EP86478 221 aa8.02□□□□□ -1.13
TPM1-229ENST00000561242 PRR20CP86479 221 aa8.02□□□□□ -1.13
TPM1-229ENST00000561242 PRR20DP86480 221 aa8.02□□□□□ -1.13
TPM1-229ENST00000561242 PRR20BP86481 221 aa8.02□□□□□ -1.13
TPM1-229ENST00000561242 PRR20AP86496 221 aa8.02□□□□□ -1.13
TPM1-229ENST00000561242 ACTL10Q5JWF8 245 aa8.02□□□□□ -1.13
TPM1-229ENST00000561242 FAM122CQ6P4D5 195 aa8.02□□□□□ -1.13
TPM1-229ENST00000561242 MORN3Q6PF18 240 aaPredicted RBP8.02□□□□□ -1.13
TPM1-229ENST00000561242 TMEM182Q6ZP80 229 aaPredicted RBP8.02□□□□□ -1.13
TPM1-229ENST00000561242 APRG1Q8IVJ8 170 aa8.02□□□□□ -1.13
TPM1-229ENST00000561242 OR4B1Q8NGF8 309 aa8.02□□□□□ -1.13
TPM1-229ENST00000561242 OR10J6PQ8NGY7 276 aa8.02□□□□□ -1.13
TPM1-229ENST00000561242 CMTM2Q8TAZ6 248 aa8.02□□□□□ -1.13
TPM1-229ENST00000561242 BLNKQ8WV28 456 aa8.02□□□□□ -1.13
TPM1-229ENST00000561242 SPATA25Q9BR10 227 aa8.02□□□□□ -1.13
TPM1-229ENST00000561242 PSMG3Q9BT73 122 aaPredicted RBP8.02□□□□□ -1.13
TPM1-229ENST00000561242 PAXXQ9BUH6 204 aa8.02□□□□□ -1.13
TPM1-229ENST00000561242 PRELID1Q9Y255 219 aa8.02□□□□□ -1.13
TPM1-229ENST00000561242 A8MZ25 164 aa8.01□□□□□ -1.13
TPM1-229ENST00000561242 HIST1H1EP10412 219 aaKnown RBP8.01□□□□□ -1.13
TPM1-229ENST00000561242 ZNF345Q14585 488 aa8.01□□□□□ -1.13
TPM1-229ENST00000561242 TCTE3Q8IZS6 198 aa8.01□□□□□ -1.13
TPM1-229ENST00000561242 CSTL1Q9H114 145 aa8.01□□□□□ -1.13
TPM1-229ENST00000561242 MAP6D1Q9H9H5 199 aa8.01□□□□□ -1.13
TPM1-229ENST00000561242 KIR2DL5BA0A0G2JN68 375 aa8□□□□□ -1.13
TPM1-229ENST00000561242 KIR2DL5BA0A0G2JPC4 375 aa8□□□□□ -1.13
TPM1-229ENST00000561242 ATP6V0CP27449 155 aa8□□□□□ -1.13
TPM1-229ENST00000561242 CDC34P49427 236 aaPredicted RBP8□□□□□ -1.13
TPM1-229ENST00000561242 UBE2L3P68036 154 aaKnown RBP8□□□□□ -1.13
TPM1-229ENST00000561242 Q5BKY6 102 aa8□□□□□ -1.13
TPM1-229ENST00000561242 RPL7L1Q6DKI1 246 aaKnown RBP8□□□□□ -1.13
TPM1-229ENST00000561242 PQLC2Q6ZP29 291 aa8□□□□□ -1.13
TPM1-229ENST00000561242 TMUB2Q71RG4 321 aa8□□□□□ -1.13
TPM1-229ENST00000561242 KIR2DL5AQ8N109 375 aa8□□□□□ -1.13
TPM1-229ENST00000561242 Q8N1Y9 231 aa8□□□□□ -1.13
TPM1-229ENST00000561242 KCNRGQ8N5I3 272 aa8□□□□□ -1.13
TPM1-229ENST00000561242 KIR2DL5BQ8NHK3 375 aa8□□□□□ -1.13
TPM1-229ENST00000561242 RNF141Q8WVD5 230 aa8□□□□□ -1.13
TPM1-229ENST00000561242 TMEM37Q8WXS4 190 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms