RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 C6orf226Q5I0X4 101 aa10.8□□□□□ -0.68
CSPG4P11-201ENST00000560634 SSC4DQ8WTU2 575 aa10.8□□□□□ -0.68
CSPG4P11-201ENST00000560634 SELLP14151 372 aa10.8□□□□□ -0.68
CSPG4P11-201ENST00000560634 DOCK10Q96BY6 2186 aa10.8□□□□□ -0.68
CSPG4P11-201ENST00000560634 NOTCH3Q9UM47 2321 aa10.8□□□□□ -0.68
CSPG4P11-201ENST00000560634 ABCA4P78363 2273 aa10.8□□□□□ -0.68
CSPG4P11-201ENST00000560634 A0A087X0K7 114 aa10.8□□□□□ -0.68
CSPG4P11-201ENST00000560634 DMRTC2Q8IXT2 367 aaPredicted RBP10.8□□□□□ -0.68
CSPG4P11-201ENST00000560634 TMEM158Q8WZ71 300 aa10.8□□□□□ -0.68
CSPG4P11-201ENST00000560634 LSM4Q9Y4Z0 139 aaKnown RBP10.8□□□□□ -0.68
CSPG4P11-201ENST00000560634 SRD5A1P18405 259 aa10.79□□□□□ -0.68
CSPG4P11-201ENST00000560634 KIR3DS1Q14943 382 aa10.79□□□□□ -0.68
CSPG4P11-201ENST00000560634 SIGLEC9Q9Y336 463 aa10.79□□□□□ -0.68
CSPG4P11-201ENST00000560634 C15orf62A8K5M9 175 aa10.79□□□□□ -0.68
CSPG4P11-201ENST00000560634 LEPROTO15243 131 aa10.79□□□□□ -0.68
CSPG4P11-201ENST00000560634 CSTL1Q9H114 145 aa10.79□□□□□ -0.68
CSPG4P11-201ENST00000560634 LINC00527Q9UJ94 153 aa10.79□□□□□ -0.68
CSPG4P11-201ENST00000560634 MTCL1Q9Y4B5 1905 aaKnown RBP10.79□□□□□ -0.68
CSPG4P11-201ENST00000560634 FAM231BA6NCW3 169 aa10.79□□□□□ -0.68
CSPG4P11-201ENST00000560634 ITGB1BP1O14713 200 aa10.79□□□□□ -0.68
CSPG4P11-201ENST00000560634 NAA38Q9BRA0 125 aaKnown RBP10.79□□□□□ -0.68
CSPG4P11-201ENST00000560634 TRAV3A0A0B4J244 114 aa10.79□□□□□ -0.68
CSPG4P11-201ENST00000560634 Q0VG73 95 aa10.79□□□□□ -0.68
CSPG4P11-201ENST00000560634 TMEM249Q2WGJ8 235 aa10.79□□□□□ -0.68
CSPG4P11-201ENST00000560634 C3orf36Q3SXR2 165 aa10.79□□□□□ -0.68
CSPG4P11-201ENST00000560634 C17orf82Q86X59 251 aaPredicted RBP10.79□□□□□ -0.68
CSPG4P11-201ENST00000560634 PNRC2Q9NPJ4 139 aaKnown RBP10.79□□□□□ -0.68
CSPG4P11-201ENST00000560634 TNFRSF6BO95407 300 aa10.78□□□□□ -0.68
CSPG4P11-201ENST00000560634 QRFPP83859 136 aa10.78□□□□□ -0.68
CSPG4P11-201ENST00000560634 C20orf204Q6ZNR8 217 aa10.78□□□□□ -0.68
CSPG4P11-201ENST00000560634 NEGR1Q7Z3B1 354 aa10.78□□□□□ -0.68
CSPG4P11-201ENST00000560634 TRGV1A0A0A0MS02 117 aa10.78□□□□□ -0.68
CSPG4P11-201ENST00000560634 B4DSR2 109 aa10.78□□□□□ -0.68
CSPG4P11-201ENST00000560634 Q6P435 159 aa10.78□□□□□ -0.68
CSPG4P11-201ENST00000560634 CASP8AP2Q9UKL3 1982 aa10.78□□□□□ -0.68
CSPG4P11-201ENST00000560634 VWC2LB2RUY7 222 aa10.78□□□□□ -0.68
CSPG4P11-201ENST00000560634 ERCC8Q13216 396 aa10.78□□□□□ -0.68
CSPG4P11-201ENST00000560634 SPANXDQ9BXN6 97 aa10.78□□□□□ -0.68
CSPG4P11-201ENST00000560634 LIME1Q9H400 295 aa10.78□□□□□ -0.68
CSPG4P11-201ENST00000560634 C14orf178Q8N769 122 aaPredicted RBP10.77□□□□□ -0.68
CSPG4P11-201ENST00000560634 RIF1Q5UIP0 2472 aaKnown RBP10.77□□□□□ -0.68
CSPG4P11-201ENST00000560634 F8WEM9 126 aa10.77□□□□□ -0.69
CSPG4P11-201ENST00000560634 TIMM21Q9BVV7 248 aa10.77□□□□□ -0.69
CSPG4P11-201ENST00000560634 GAGE12BA1L429 117 aa10.77□□□□□ -0.69
CSPG4P11-201ENST00000560634 FAM223BA6NKX1 122 aa10.77□□□□□ -0.69
CSPG4P11-201ENST00000560634 LINC00473A8K010 186 aa10.77□□□□□ -0.69
CSPG4P11-201ENST00000560634 RNASE2P10153 161 aaKnown RBP10.77□□□□□ -0.69
CSPG4P11-201ENST00000560634 CT83Q5H943 113 aa10.77□□□□□ -0.69
CSPG4P11-201ENST00000560634 FAM223AQ8IWN6 122 aa10.77□□□□□ -0.69
CSPG4P11-201ENST00000560634 WFDC12Q8WWY7 111 aa10.77□□□□□ -0.69
CSPG4P11-201ENST00000560634 C1orf159Q96HA4 380 aa10.77□□□□□ -0.69
CSPG4P11-201ENST00000560634 BUB1B-PAK6H3BSN5 160 aa10.77□□□□□ -0.69
CSPG4P11-201ENST00000560634 CDK2AP2O75956 126 aa10.77□□□□□ -0.69
CSPG4P11-201ENST00000560634 ZNF474Q6S9Z5 364 aaPredicted RBP10.77□□□□□ -0.69
CSPG4P11-201ENST00000560634 ASCL4Q6XD76 172 aa10.77□□□□□ -0.69
CSPG4P11-201ENST00000560634 CACNA1BQ00975 2339 aa10.77□□□□□ -0.69
CSPG4P11-201ENST00000560634 PRIMA1Q86XR5 153 aa10.76□□□□□ -0.69
CSPG4P11-201ENST00000560634 ZNF664Q8N3J9 261 aa10.76□□□□□ -0.69
CSPG4P11-201ENST00000560634 C20orf144Q9BQM9 153 aa10.76□□□□□ -0.69
CSPG4P11-201ENST00000560634 CHAC1Q9BUX1 264 aa10.76□□□□□ -0.69
CSPG4P11-201ENST00000560634 SAP30O75446 220 aa10.76□□□□□ -0.69
CSPG4P11-201ENST00000560634 Q8TAT8 98 aa10.76□□□□□ -0.69
CSPG4P11-201ENST00000560634 ATAD5Q96QE3 1844 aa10.76□□□□□ -0.69
CSPG4P11-201ENST00000560634 INSP01308 110 aa10.76□□□□□ -0.69
CSPG4P11-201ENST00000560634 BMPERQ8N8U9 685 aa10.76□□□□□ -0.69
CSPG4P11-201ENST00000560634 Q86TA4 180 aa10.76□□□□□ -0.69
CSPG4P11-201ENST00000560634 ZNF492Q9P255 531 aa10.76□□□□□ -0.69
CSPG4P11-201ENST00000560634 LILRA1O75019 489 aa10.75□□□□□ -0.69
CSPG4P11-201ENST00000560634 AMN1Q8IY45 258 aa10.75□□□□□ -0.69
CSPG4P11-201ENST00000560634 TMEM105Q8N8V8 129 aa10.75□□□□□ -0.69
CSPG4P11-201ENST00000560634 GTSF1LQ9H1H1 148 aa10.75□□□□□ -0.69
CSPG4P11-201ENST00000560634 H3BUX3 64 aa10.75□□□□□ -0.69
CSPG4P11-201ENST00000560634 FCN3O75636 299 aa10.75□□□□□ -0.69
CSPG4P11-201ENST00000560634 SHANK2-AS3Q9BTD1 123 aa10.75□□□□□ -0.69
CSPG4P11-201ENST00000560634 KLF12Q9Y4X4 402 aa10.75□□□□□ -0.69
CSPG4P11-201ENST00000560634 LHFPL4Q7Z7J7 247 aa10.75□□□□□ -0.69
CSPG4P11-201ENST00000560634 ZNF48Q96MX3 618 aaPredicted RBP10.75□□□□□ -0.69
CSPG4P11-201ENST00000560634 GAFA1Q96PS6 74 aa10.75□□□□□ -0.69
CSPG4P11-201ENST00000560634 CACNA1HO95180 2353 aa10.75□□□□□ -0.69
CSPG4P11-201ENST00000560634 DOCK4Q8N1I0 1966 aa10.75□□□□□ -0.69
CSPG4P11-201ENST00000560634 FOXL2NBQ6ZUU3 175 aa10.75□□□□□ -0.69
CSPG4P11-201ENST00000560634 ZNF329Q86UD4 541 aa10.75□□□□□ -0.69
CSPG4P11-201ENST00000560634 COX11Q9Y6N1 276 aa10.75□□□□□ -0.69
CSPG4P11-201ENST00000560634 TMEM219Q86XT9 240 aa10.74□□□□□ -0.69
CSPG4P11-201ENST00000560634 SPACA3Q8IXA5 215 aa10.74□□□□□ -0.69
CSPG4P11-201ENST00000560634 PIP4P2Q8N4L2 257 aa10.74□□□□□ -0.69
CSPG4P11-201ENST00000560634 LRRK1Q38SD2 2015 aa10.74□□□□□ -0.69
CSPG4P11-201ENST00000560634 RHODO00212 210 aa10.74□□□□□ -0.69
CSPG4P11-201ENST00000560634 NPC2P61916 151 aa10.74□□□□□ -0.69
CSPG4P11-201ENST00000560634 RHPN1-AS1Q9BWJ2 59 aa10.74□□□□□ -0.69
CSPG4P11-201ENST00000560634 TRAV8-3A0A0A6YYJ7 113 aa10.74□□□□□ -0.69
CSPG4P11-201ENST00000560634 ANAPC10Q9UM13 185 aa10.74□□□□□ -0.69
CSPG4P11-201ENST00000560634 SPINK8P0C7L1 97 aa10.74□□□□□ -0.69
CSPG4P11-201ENST00000560634 INAFM2P0DMQ5 153 aa10.74□□□□□ -0.69
CSPG4P11-201ENST00000560634 CD59P13987 128 aa10.74□□□□□ -0.69
CSPG4P11-201ENST00000560634 SS18Q15532 418 aa10.74□□□□□ -0.69
CSPG4P11-201ENST00000560634 TRBV20-1A0A075B6N2 111 aa10.73□□□□□ -0.69
CSPG4P11-201ENST00000560634 MBD3L4A6NDZ8 208 aaPredicted RBP10.73□□□□□ -0.69
CSPG4P11-201ENST00000560634 MBD3L3A6NE82 208 aaPredicted RBP10.73□□□□□ -0.69
CSPG4P11-201ENST00000560634 MBD3L5A6NJ08 208 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms