RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 C16orf90A8MZG2 172 aa6.86□□□□□ -1.31
HERC1-209ENST00000560519 BUB3O43684 328 aa6.86□□□□□ -1.31
HERC1-209ENST00000560519 SSNA1O43805 119 aa6.86□□□□□ -1.31
HERC1-209ENST00000560519 RAB11AP62491 216 aa6.86□□□□□ -1.31
HERC1-209ENST00000560519 ID3Q02535 119 aa6.86□□□□□ -1.31
HERC1-209ENST00000560519 USF2Q15853 346 aaPredicted RBP6.86□□□□□ -1.31
HERC1-209ENST00000560519 OR8G2PQ6IF36 304 aa6.86□□□□□ -1.31
HERC1-209ENST00000560519 PRSS54Q6PEW0 395 aa6.86□□□□□ -1.31
HERC1-209ENST00000560519 ZBTB8BQ8NAP8 495 aaPredicted RBP6.86□□□□□ -1.31
HERC1-209ENST00000560519 OR4D5Q8NGN0 318 aa6.86□□□□□ -1.31
HERC1-209ENST00000560519 C2orf50Q96LR7 162 aa6.86□□□□□ -1.31
HERC1-209ENST00000560519 ATG101Q9BSB4 218 aa6.86□□□□□ -1.31
HERC1-209ENST00000560519 SCRT1Q9BWW7 348 aa6.86□□□□□ -1.31
HERC1-209ENST00000560519 SAV1Q9H4B6 383 aaPredicted RBP6.86□□□□□ -1.31
HERC1-209ENST00000560519 DYNC1H1Q14204 4646 aaKnown RBP6.86□□□□□ -1.31
HERC1-209ENST00000560519 LOC102723971A0A1B0GUV8 181 aa6.85□□□□□ -1.31
HERC1-209ENST00000560519 CCSO14618 274 aa6.85□□□□□ -1.31
HERC1-209ENST00000560519 SCGB1D2O95969 90 aa6.85□□□□□ -1.31
HERC1-209ENST00000560519 FABP1P07148 127 aa6.85□□□□□ -1.31
HERC1-209ENST00000560519 RD3LP0DJH9 198 aa6.85□□□□□ -1.31
HERC1-209ENST00000560519 HTN3P15516 51 aa6.85□□□□□ -1.31
HERC1-209ENST00000560519 DAD1P61803 113 aa6.85□□□□□ -1.31
HERC1-209ENST00000560519 CYCSP99999 105 aaKnown RBP6.85□□□□□ -1.31
HERC1-209ENST00000560519 RRN3P1Q2M238 152 aa6.85□□□□□ -1.31
HERC1-209ENST00000560519 EBLN2Q6P2I7 272 aa6.85□□□□□ -1.31
HERC1-209ENST00000560519 MAPKAPK5-AS1Q8N8E1 139 aa6.85□□□□□ -1.31
HERC1-209ENST00000560519 OR51G1Q8NGK1 321 aa6.85□□□□□ -1.31
HERC1-209ENST00000560519 RNF125Q96EQ8 232 aa6.85□□□□□ -1.31
HERC1-209ENST00000560519 MAGT1Q9H0U3 335 aa6.85□□□□□ -1.31
HERC1-209ENST00000560519 ABCA13Q86UQ4 5058 aa6.85□□□□□ -1.31
HERC1-209ENST00000560519 C7orf66A4D0T2 115 aa6.84□□□□□ -1.31
HERC1-209ENST00000560519 L7N2F9 121 aa6.84□□□□□ -1.31
HERC1-209ENST00000560519 GOSR2O14653 212 aa6.84□□□□□ -1.31
HERC1-209ENST00000560519 SSSCA1O60232 199 aa6.84□□□□□ -1.31
HERC1-209ENST00000560519 IGKV3-20P01619 116 aa6.84□□□□□ -1.31
HERC1-209ENST00000560519 IAPPP10997 89 aa6.84□□□□□ -1.31
HERC1-209ENST00000560519 PVALBP20472 110 aaPredicted RBP6.84□□□□□ -1.31
HERC1-209ENST00000560519 MEOX2P50222 304 aa6.84□□□□□ -1.31
HERC1-209ENST00000560519 TAS2R30P59541 319 aa6.84□□□□□ -1.31
HERC1-209ENST00000560519 POLR2GP62487 172 aaKnown RBP eCLIP6.84□□□□□ -1.31
HERC1-209ENST00000560519 VAMP2P63027 116 aa6.84□□□□□ -1.31
HERC1-209ENST00000560519 TMEM88Q6PEY1 159 aa6.84□□□□□ -1.31
HERC1-209ENST00000560519 ZNF709Q8N972 641 aa6.84□□□□□ -1.31
HERC1-209ENST00000560519 OR4B1Q8NGF8 309 aa6.84□□□□□ -1.31
HERC1-209ENST00000560519 ACY3Q96HD9 319 aa6.84□□□□□ -1.31
HERC1-209ENST00000560519 SMIM8Q96KF7 97 aa6.84□□□□□ -1.31
HERC1-209ENST00000560519 PAIP2BQ9ULR5 123 aaKnown RBP6.84□□□□□ -1.31
HERC1-209ENST00000560519 STRAPQ9Y3F4 350 aaKnown RBP6.84□□□□□ -1.31
HERC1-209ENST00000560519 YTHDF2Q9Y5A9 579 aaKnown RBP6.84□□□□□ -1.31
HERC1-209ENST00000560519 DNAH11Q96DT5 4516 aa6.84□□□□□ -1.31
HERC1-209ENST00000560519 RYR1P21817 5038 aa6.84□□□□□ -1.32
HERC1-209ENST00000560519 MUC4Q99102 2169 aa6.84□□□□□ -1.32
HERC1-209ENST00000560519 ISLRO14498 428 aa6.83□□□□□ -1.32
HERC1-209ENST00000560519 TSC22D2O75157 780 aa6.83□□□□□ -1.32
HERC1-209ENST00000560519 MBPP02686 304 aaPredicted RBP6.83□□□□□ -1.32
HERC1-209ENST00000560519 PSG1P11464 419 aa6.83□□□□□ -1.32
HERC1-209ENST00000560519 GPX4P36969 197 aaPredicted RBP6.83□□□□□ -1.32
HERC1-209ENST00000560519 PAX9P55771 341 aa6.83□□□□□ -1.32
HERC1-209ENST00000560519 PSG9Q00887 426 aa6.83□□□□□ -1.32
HERC1-209ENST00000560519 MLANAQ16655 118 aa6.83□□□□□ -1.32
HERC1-209ENST00000560519 SPANXN5Q5MJ07 72 aa6.83□□□□□ -1.32
HERC1-209ENST00000560519 C1orf194Q5T5A4 169 aa6.83□□□□□ -1.32
HERC1-209ENST00000560519 GDF5OSQ5U4N7 250 aa6.83□□□□□ -1.32
HERC1-209ENST00000560519 LINC00052Q96N35 136 aa6.83□□□□□ -1.32
HERC1-209ENST00000560519 TMEM208Q9BTX3 173 aa6.83□□□□□ -1.32
HERC1-209ENST00000560519 PBDC1Q9BVG4 233 aa6.83□□□□□ -1.32
HERC1-209ENST00000560519 NMES1Q9C002 83 aa6.83□□□□□ -1.32
HERC1-209ENST00000560519 RPRMQ9NS64 109 aa6.83□□□□□ -1.32
HERC1-209ENST00000560519 PSENENQ9NZ42 101 aa6.83□□□□□ -1.32
HERC1-209ENST00000560519 ALG5Q9Y673 324 aa6.83□□□□□ -1.32
HERC1-209ENST00000560519 ZFP92A6NM28 416 aa6.82□□□□□ -1.32
HERC1-209ENST00000560519 RLN2P04090 185 aa6.82□□□□□ -1.32
HERC1-209ENST00000560519 S100A7P31151 101 aa6.82□□□□□ -1.32
HERC1-209ENST00000560519 FXYD7P58549 80 aa6.82□□□□□ -1.32
HERC1-209ENST00000560519 S100A10P60903 97 aa6.82□□□□□ -1.32
HERC1-209ENST00000560519 B2MP61769 119 aa6.82□□□□□ -1.32
HERC1-209ENST00000560519 C6orf223Q8N319 242 aa6.82□□□□□ -1.32
HERC1-209ENST00000560519 TMEM170AQ8WVE7 144 aa6.82□□□□□ -1.32
HERC1-209ENST00000560519 NPIPB3Q92617 1050 aa6.82□□□□□ -1.32
HERC1-209ENST00000560519 SLC35E1Q96K37 410 aa6.82□□□□□ -1.32
HERC1-209ENST00000560519 MED28Q9H204 178 aa6.82□□□□□ -1.32
HERC1-209ENST00000560519 MGAT4CQ9UBM8 478 aa6.82□□□□□ -1.32
HERC1-209ENST00000560519 RCL1Q9Y2P8 373 aaKnown RBP6.82□□□□□ -1.32
HERC1-209ENST00000560519 LSM5Q9Y4Y9 91 aaKnown RBP6.82□□□□□ -1.32
HERC1-209ENST00000560519 DNAH17Q9UFH2 4485 aa6.81□□□□□ -1.32
HERC1-209ENST00000560519 NBDYA0A0U1RRE5 68 aa6.81□□□□□ -1.32
HERC1-209ENST00000560519 LYRM9A8MSI8 78 aa6.81□□□□□ -1.32
HERC1-209ENST00000560519 H3BP45 60 aa6.81□□□□□ -1.32
HERC1-209ENST00000560519 K7EPK0 472 aa6.81□□□□□ -1.32
HERC1-209ENST00000560519 INSP01308 110 aa6.81□□□□□ -1.32
HERC1-209ENST00000560519 PET100P0DJ07 73 aa6.81□□□□□ -1.32
HERC1-209ENST00000560519 CCL18P55774 89 aa6.81□□□□□ -1.32
HERC1-209ENST00000560519 IL15RAQ13261 267 aa6.81□□□□□ -1.32
HERC1-209ENST00000560519 PPP1R14BQ96C90 147 aa6.81□□□□□ -1.32
HERC1-209ENST00000560519 IGF2BP2-AS1Q96M15 143 aa6.81□□□□□ -1.32
HERC1-209ENST00000560519 KRTAP4-5Q9BYR2 181 aa6.81□□□□□ -1.32
HERC1-209ENST00000560519 SLC35B3Q9H1N7 401 aa6.81□□□□□ -1.32
HERC1-209ENST00000560519 SOCS3O14543 225 aa6.8□□□□□ -1.32
HERC1-209ENST00000560519 SIX6O95475 246 aa6.8□□□□□ -1.32
HERC1-209ENST00000560519 CFDP00746 253 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 395.4 ms