RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 CRHP06850 196 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 OR10J4P0C629 311 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 COX7CP15954 63 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 NFYBP25208 207 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 PHBP35232 272 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 RAB5CP51148 216 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 INSL3P51460 131 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 UBE2BP63146 152 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 GNG5P63218 68 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 MRPS15P82914 257 aaKnown RBP0.1□□□□□ -2.39
SPG11-222ENST00000560435 CDK6Q00534 326 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 MYL5Q02045 173 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 TMED2Q15363 201 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 TAF1AQ15573 450 aaPredicted RBP0.1□□□□□ -2.39
SPG11-222ENST00000560435 KRTAP21-1Q3LI58 79 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 SCGB2B2Q4G0G5 96 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 SPRNQ5BIV9 151 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 FAM74A1Q5RGS3 127 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 AKR1C8PQ5T2L2 129 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 BCL2L15Q5TBC7 163 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 EIF5AL1Q6IS14 154 aaKnown RBP0.1□□□□□ -2.39
SPG11-222ENST00000560435 GLIPR1L1Q6UWM5 242 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 C2orf82Q6UX34 121 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 C4orf22Q6V702 233 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 S100A7AQ86SG5 101 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 ST6GALNAC3Q8NDV1 305 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 PLPP5Q8NEB5 264 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 OR5D16Q8NGK9 328 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 OR10AG1Q8NH19 301 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 Q8TAT8 98 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 PSMF1Q92530 271 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 BORCS5Q969J3 196 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 ZC2HC1AQ96GY0 325 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 CARD19Q96LW7 228 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 GPX7Q96SL4 187 aaPredicted RBP0.1□□□□□ -2.39
SPG11-222ENST00000560435 NPCDR1Q9BY65 106 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 PBOV1Q9GZY1 135 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 C10orf95Q9H7T3 257 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 POPDC3Q9HBV1 291 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 LYRM2Q9NU23 88 aaPredicted RBP0.1□□□□□ -2.39
SPG11-222ENST00000560435 TAS2R7Q9NYW3 318 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 TMEM14CQ9P0S9 112 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 PCTPQ9UKL6 214 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 KIF1BO60333 1816 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 SCN8AQ9UQD0 1980 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 FREM3P0C091 2139 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 PLXNA4Q9HCM2 1894 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 CECR2Q9BXF3 1484 aa0.1□□□□□ -2.39
SPG11-222ENST00000560435 CAMSAP1Q5T5Y3 1602 aa0.09□□□□□ -2.39
SPG11-222ENST00000560435 MED12Q93074 2177 aa0.09□□□□□ -2.39
SPG11-222ENST00000560435 MYH7BA7E2Y1 1941 aa0.09□□□□□ -2.39
SPG11-222ENST00000560435 ARHGEF11O15085 1522 aa0.09□□□□□ -2.39
SPG11-222ENST00000560435 MACF1Q9UPN3 7388 aaKnown RBP0.09□□□□□ -2.39
SPG11-222ENST00000560435 ZNF462Q96JM2 2506 aa0.09□□□□□ -2.39
SPG11-222ENST00000560435 MYH10P35580 1976 aa0.09□□□□□ -2.39
SPG11-222ENST00000560435 IGLV3-32A0A0A0MS00 114 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 A0A0J9YY99 117 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 A6NN06 94 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 H7C1C5 153 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 NCR3O14931 201 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 PIAS1O75925 651 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 ERC2-IT1O76042 136 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 CST7O76096 145 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 IFNA1P01562 189 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 TRGC2P03986 189 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 CXCL8P10145 99 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 OGNP20774 298 aaKnown RBP0.09□□□□□ -2.4
SPG11-222ENST00000560435 FOXA3P55318 350 aaPredicted RBP0.09□□□□□ -2.4
SPG11-222ENST00000560435 LCN6P62502 163 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 C1orf140Q5VVS0 124 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 HACD4Q5VWC8 232 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 HAGHLQ6PII5 290 aaPredicted RBP0.09□□□□□ -2.4
SPG11-222ENST00000560435 LINC00575Q6W349 94 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 ARPINQ7Z6K5 226 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 LYG2Q86SG7 212 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 GKN2Q86XP6 184 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 ATOH7Q8N100 152 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 OR5AS1Q8N127 324 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 OR5D14Q8NGL3 314 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 OR10AC1Q8NH08 325 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 ZNF431Q8TF32 576 aaPredicted RBP0.09□□□□□ -2.4
SPG11-222ENST00000560435 POP5Q969H6 163 aaKnown RBP0.09□□□□□ -2.4
SPG11-222ENST00000560435 RAB37Q96AX2 223 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 CHCHD1Q96BP2 118 aaKnown RBP0.09□□□□□ -2.4
SPG11-222ENST00000560435 PLEKHB2Q96CS7 222 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 MUCL1Q96DR8 90 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 ZHX1-C8orf76Q96EF9 292 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 MALSU1Q96EH3 234 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 HYLS1Q96M11 299 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 PHB2Q99623 299 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 PRRT1Q99946 306 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 PAIP2Q9BPZ3 127 aaKnown RBP0.09□□□□□ -2.4
SPG11-222ENST00000560435 RTL8AQ9BWD3 113 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 OR2J1Q9GZK6 312 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 BOLA2Q9H3K6 86 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 PSTPIP2Q9H939 334 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 CACYBPQ9HB71 228 aaKnown RBP0.09□□□□□ -2.4
SPG11-222ENST00000560435 MED29Q9NX70 200 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 IL20Q9NYY1 176 aa0.09□□□□□ -2.4
SPG11-222ENST00000560435 TNFSF18Q9UNG2 199 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms