RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 SRD5A3Q9H8P0 318 aa8.72□□□□□ -1.01
USP3-218ENST00000560202 MTORP42345 2549 aa8.71□□□□□ -1.02
USP3-218ENST00000560202 A0A0G2JLM5 398 aa8.71□□□□□ -1.02
USP3-218ENST00000560202 PHOX2AO14813 284 aa8.71□□□□□ -1.02
USP3-218ENST00000560202 SCGB2A1O75556 95 aa8.71□□□□□ -1.02
USP3-218ENST00000560202 CLEC3BP05452 202 aa8.71□□□□□ -1.02
USP3-218ENST00000560202 CTSGP08311 255 aa8.71□□□□□ -1.02
USP3-218ENST00000560202 GZMBP10144 247 aa8.71□□□□□ -1.02
USP3-218ENST00000560202 PSG1P11464 419 aa8.71□□□□□ -1.02
USP3-218ENST00000560202 GPR183P32249 361 aa8.71□□□□□ -1.02
USP3-218ENST00000560202 IQCJQ1A5X6 159 aa8.71□□□□□ -1.02
USP3-218ENST00000560202 TEX38Q6PEX7 206 aa8.71□□□□□ -1.02
USP3-218ENST00000560202 CLEC19AQ6UXS0 136 aa8.71□□□□□ -1.02
USP3-218ENST00000560202 LCNL1Q6ZST4 164 aa8.71□□□□□ -1.02
USP3-218ENST00000560202 ATP6V0BQ99437 205 aa8.71□□□□□ -1.02
USP3-218ENST00000560202 CUBNO60494 3623 aa8.7□□□□□ -1.02
USP3-218ENST00000560202 TGIF2-C20orf24A0A0A6YYL0 155 aa8.7□□□□□ -1.02
USP3-218ENST00000560202 TCF21O43680 179 aa8.7□□□□□ -1.02
USP3-218ENST00000560202 TOMM40O96008 361 aa8.7□□□□□ -1.02
USP3-218ENST00000560202 ELANEP08246 267 aa8.7□□□□□ -1.02
USP3-218ENST00000560202 YPEL3P61236 119 aaPredicted RBP8.7□□□□□ -1.02
USP3-218ENST00000560202 FOXE3Q13461 319 aa8.7□□□□□ -1.02
USP3-218ENST00000560202 PMS2P11Q13670 270 aa8.7□□□□□ -1.02
USP3-218ENST00000560202 CDPF1Q6NVV7 123 aa8.7□□□□□ -1.02
USP3-218ENST00000560202 SPSB3Q6PJ21 355 aa8.7□□□□□ -1.02
USP3-218ENST00000560202 SSX7Q7RTT5 188 aa8.7□□□□□ -1.02
USP3-218ENST00000560202 MBD3L1Q8WWY6 194 aa8.7□□□□□ -1.02
USP3-218ENST00000560202 FRZBQ92765 325 aa8.7□□□□□ -1.02
USP3-218ENST00000560202 CTXND1A0A1B0GTU2 59 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 A0A1W2PPV4 95 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 COX7A2P2O60397 106 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 ADMP35318 185 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 CDC34P49427 236 aaPredicted RBP8.69□□□□□ -1.02
USP3-218ENST00000560202 ICAM4Q14773 271 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 ANKRD39Q53RE8 183 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 LCN15Q6UWW0 184 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 TMEM37Q8WXS4 190 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 PYGO2Q9BRQ0 406 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 CHRDL1Q9BU40 450 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 C19orf24Q9BVV8 132 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 PRO1933Q9H354 126 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 C16orf95Q9H693 158 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 SLC25A22Q9H936 323 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 SEPSECSQ9HD40 501 aaKnown RBP8.69□□□□□ -1.02
USP3-218ENST00000560202 DNAJC4Q9NNZ3 241 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 NSD1Q96L73 2696 aaPredicted RBP8.69□□□□□ -1.02
USP3-218ENST00000560202 A0A1B0GV50 99 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 MAP1LC3B2A6NCE7 125 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 IGHV3-11P01762 117 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 ORM2P19652 201 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 PLP1P60201 277 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 ERVFC1-1P60608 527 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 RHOBP62745 196 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 FAM78BQ5VT40 261 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 SPATA31B1PQ5VZV4 182 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 PATE2Q6UY27 113 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 ZNF664Q8N3J9 261 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 KLHDC1Q8N7A1 406 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 RNF152Q8N8N0 203 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 OR51G1Q8NGK1 321 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 OR1L4Q8NGR5 311 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 OR1B1Q8NGR6 318 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 GATAD1Q8WUU5 269 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 TMEM18Q96B42 140 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 RARRES2Q99969 163 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 MAP1LC3BQ9GZQ8 125 aa8.69□□□□□ -1.02
USP3-218ENST00000560202 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.68□□□□□ -1.02
USP3-218ENST00000560202 LOC102723971A0A1B0GUV8 181 aa8.68□□□□□ -1.02
USP3-218ENST00000560202 ZNF727A8MUV8 499 aa8.68□□□□□ -1.02
USP3-218ENST00000560202 HMGB3O15347 200 aaKnown RBP8.68□□□□□ -1.02
USP3-218ENST00000560202 HYPMO75409 117 aa8.68□□□□□ -1.02
USP3-218ENST00000560202 RPLP1P05386 114 aaKnown RBP8.68□□□□□ -1.02
USP3-218ENST00000560202 OR5G3P0C626 314 aa8.68□□□□□ -1.02
USP3-218ENST00000560202 LYZP61626 148 aa8.68□□□□□ -1.02
USP3-218ENST00000560202 GFI1BQ5VTD9 330 aa8.68□□□□□ -1.02
USP3-218ENST00000560202 C10orf113Q5VZT2 155 aa8.68□□□□□ -1.02
USP3-218ENST00000560202 ZNF343Q6P1L6 599 aa8.68□□□□□ -1.02
USP3-218ENST00000560202 ZNF491Q8N8L2 437 aa8.68□□□□□ -1.02
USP3-218ENST00000560202 OR4X2Q8NGF9 303 aa8.68□□□□□ -1.02
USP3-218ENST00000560202 MYOZ3Q8TDC0 251 aa8.68□□□□□ -1.02
USP3-218ENST00000560202 RNF2Q99496 336 aa8.68□□□□□ -1.02
USP3-218ENST00000560202 GNB4Q9HAV0 340 aa8.68□□□□□ -1.02
USP3-218ENST00000560202 FUT9Q9Y231 359 aa8.68□□□□□ -1.02
USP3-218ENST00000560202 WI2-2373I1.2A0A1W2PRP0 233 aa8.67□□□□□ -1.02
USP3-218ENST00000560202 NDUFA7O95182 113 aa8.67□□□□□ -1.02
USP3-218ENST00000560202 IFNA1P01562 189 aa8.67□□□□□ -1.02
USP3-218ENST00000560202 AMBPP02760 352 aa8.67□□□□□ -1.02
USP3-218ENST00000560202 IL4P05112 153 aa8.67□□□□□ -1.02
USP3-218ENST00000560202 FGF8P55075 233 aaPredicted RBP8.67□□□□□ -1.02
USP3-218ENST00000560202 FAM3BP58499 235 aaPredicted RBP8.67□□□□□ -1.02
USP3-218ENST00000560202 CCL20P78556 96 aa8.67□□□□□ -1.02
USP3-218ENST00000560202 MIR17HGQ75NE6 70 aa8.67□□□□□ -1.02
USP3-218ENST00000560202 CYB561D1Q8N8Q1 229 aa8.67□□□□□ -1.02
USP3-218ENST00000560202 OR5AU1Q8NGC0 362 aa8.67□□□□□ -1.02
USP3-218ENST00000560202 LINC01006Q8NI28 216 aa8.67□□□□□ -1.02
USP3-218ENST00000560202 FN1P02751 2386 aaKnown RBP8.67□□□□□ -1.02
USP3-218ENST00000560202 IGHV3-35A0A0C4DH35 117 aa8.66□□□□□ -1.02
USP3-218ENST00000560202 TRBV12-3P01733 135 aa8.66□□□□□ -1.02
USP3-218ENST00000560202 STAG3L2P0CL84 134 aa8.66□□□□□ -1.02
USP3-218ENST00000560202 STAG3L3P0CL85 134 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms