RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 SLC39A9Q9NUM3 307 aa12.45□□□□□ -0.42
RPL28-209ENST00000560055 TENM3Q9P273 2699 aa12.45□□□□□ -0.42
RPL28-209ENST00000560055 ELOA3CA0A087WX78 387 aaPredicted RBP12.44□□□□□ -0.42
RPL28-209ENST00000560055 LOC102724200A0A096LPH7 203 aaPredicted RBP12.44□□□□□ -0.42
RPL28-209ENST00000560055 GALR1P47211 349 aa12.44□□□□□ -0.42
RPL28-209ENST00000560055 Q6ZRG5 221 aa12.44□□□□□ -0.42
RPL28-209ENST00000560055 LINC00305Q7Z4B0 112 aa12.44□□□□□ -0.42
RPL28-209ENST00000560055 S100A7AQ86SG5 101 aa12.44□□□□□ -0.42
RPL28-209ENST00000560055 OR2T35Q8NGX2 323 aa12.44□□□□□ -0.42
RPL28-209ENST00000560055 AQP10Q96PS8 301 aa12.44□□□□□ -0.42
RPL28-209ENST00000560055 PXMP4Q9Y6I8 212 aa12.44□□□□□ -0.42
RPL28-209ENST00000560055 KMT2CQ8NEZ4 4911 aaKnown RBP12.44□□□□□ -0.42
RPL28-209ENST00000560055 COX7A2P2O60397 106 aa12.43□□□□□ -0.42
RPL28-209ENST00000560055 SMIM3Q9BZL3 60 aa12.43□□□□□ -0.42
RPL28-209ENST00000560055 WFDC1Q9HC57 220 aa12.43□□□□□ -0.42
RPL28-209ENST00000560055 DNAJC4Q9NNZ3 241 aa12.43□□□□□ -0.42
RPL28-209ENST00000560055 MRPS12O15235 138 aaKnown RBP12.42□□□□□ -0.42
RPL28-209ENST00000560055 RPL7P18124 248 aaKnown RBP12.42□□□□□ -0.42
RPL28-209ENST00000560055 SNRPD3P62318 126 aaKnown RBP12.42□□□□□ -0.42
RPL28-209ENST00000560055 SAMD13Q5VXD3 122 aa12.42□□□□□ -0.42
RPL28-209ENST00000560055 MORN5Q5VZ52 161 aa12.42□□□□□ -0.42
RPL28-209ENST00000560055 C10orf113Q5VZT2 155 aa12.42□□□□□ -0.42
RPL28-209ENST00000560055 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.42□□□□□ -0.42
RPL28-209ENST00000560055 OR1L4Q8NGR5 311 aa12.42□□□□□ -0.42
RPL28-209ENST00000560055 PFDN5Q99471 154 aa12.42□□□□□ -0.42
RPL28-209ENST00000560055 RSG1Q9BU20 258 aa12.42□□□□□ -0.42
RPL28-209ENST00000560055 PARD6GQ9BYG4 376 aaPredicted RBP12.42□□□□□ -0.42
RPL28-209ENST00000560055 RNF24Q9Y225 148 aa12.42□□□□□ -0.42
RPL28-209ENST00000560055 KIR2DL5BA0A0G2JN68 375 aa12.41□□□□□ -0.42
RPL28-209ENST00000560055 KIR2DL5BA0A0G2JPC4 375 aa12.41□□□□□ -0.42
RPL28-209ENST00000560055 PSMB3P49720 205 aa12.41□□□□□ -0.42
RPL28-209ENST00000560055 MEOX2P50222 304 aa12.41□□□□□ -0.42
RPL28-209ENST00000560055 PSMG4Q5JS54 123 aa12.41□□□□□ -0.42
RPL28-209ENST00000560055 KIR2DL5AQ8N109 375 aa12.41□□□□□ -0.42
RPL28-209ENST00000560055 KIR2DL5BQ8NHK3 375 aa12.41□□□□□ -0.42
RPL28-209ENST00000560055 U3KQK5 164 aa12.41□□□□□ -0.42
RPL28-209ENST00000560055 A0A087X0K7 114 aa12.4□□□□□ -0.42
RPL28-209ENST00000560055 RNF222A6NCQ9 220 aa12.4□□□□□ -0.42
RPL28-209ENST00000560055 ISLRO14498 428 aa12.4□□□□□ -0.42
RPL28-209ENST00000560055 GATAD1Q8WUU5 269 aa12.4□□□□□ -0.42
RPL28-209ENST00000560055 SPATA25Q9BR10 227 aa12.4□□□□□ -0.42
RPL28-209ENST00000560055 ZMAT4Q9H898 229 aa12.4□□□□□ -0.42
RPL28-209ENST00000560055 KCNIP2Q9NS61 270 aa12.4□□□□□ -0.42
RPL28-209ENST00000560055 TNFSF18Q9UNG2 199 aa12.4□□□□□ -0.42
RPL28-209ENST00000560055 FXYD6-FXYD2A0A087WZ82 144 aa12.39□□□□□ -0.43
RPL28-209ENST00000560055 IFNA5P01569 189 aa12.39□□□□□ -0.43
RPL28-209ENST00000560055 RPL35AP18077 110 aaKnown RBP12.39□□□□□ -0.43
RPL28-209ENST00000560055 APOC4P55056 127 aa12.39□□□□□ -0.43
RPL28-209ENST00000560055 GCSAMLQ5JQS6 135 aa12.39□□□□□ -0.43
RPL28-209ENST00000560055 Q6ZNX1 250 aa12.39□□□□□ -0.43
RPL28-209ENST00000560055 ZNF709Q8N972 641 aa12.39□□□□□ -0.43
RPL28-209ENST00000560055 RCHY1Q96PM5 261 aa12.39□□□□□ -0.43
RPL28-209ENST00000560055 AGRNO00468 2067 aa12.39□□□□□ -0.43
RPL28-209ENST00000560055 C17orf112F2Z3M2 114 aa12.38□□□□□ -0.43
RPL28-209ENST00000560055 ID1P41134 155 aa12.38□□□□□ -0.43
RPL28-209ENST00000560055 TRPT1Q86TN4 253 aaKnown RBP12.38□□□□□ -0.43
RPL28-209ENST00000560055 INO80EQ8NBZ0 244 aaPredicted RBP12.38□□□□□ -0.43
RPL28-209ENST00000560055 SCGB1C1Q8TD33 95 aa12.38□□□□□ -0.43
RPL28-209ENST00000560055 C16orf92Q96LL3 132 aa12.38□□□□□ -0.43
RPL28-209ENST00000560055 TRAV8-2A0A0B4J237 113 aa12.37□□□□□ -0.43
RPL28-209ENST00000560055 TRAV5A0A0B4J249 113 aa12.37□□□□□ -0.43
RPL28-209ENST00000560055 KNCNA6PVL3 124 aa12.37□□□□□ -0.43
RPL28-209ENST00000560055 UBE2CO00762 179 aa12.37□□□□□ -0.43
RPL28-209ENST00000560055 IGLC2P0DOY2 106 aa12.37□□□□□ -0.43
RPL28-209ENST00000560055 ATF4P18848 351 aaPredicted RBP12.37□□□□□ -0.43
RPL28-209ENST00000560055 BPIFA4PQ86YQ2 179 aa12.37□□□□□ -0.43
RPL28-209ENST00000560055 C20orf173Q96LM9 149 aa12.37□□□□□ -0.43
RPL28-209ENST00000560055 RETNQ9HD89 108 aa12.37□□□□□ -0.43
RPL28-209ENST00000560055 SMLR1H3BR10 107 aa12.36□□□□□ -0.43
RPL28-209ENST00000560055 ZNF266Q14584 549 aa12.36□□□□□ -0.43
RPL28-209ENST00000560055 ACTL10Q5JWF8 245 aa12.36□□□□□ -0.43
RPL28-209ENST00000560055 Q6ZWC4 215 aa12.36□□□□□ -0.43
RPL28-209ENST00000560055 STHQ8IWL8 128 aa12.36□□□□□ -0.43
RPL28-209ENST00000560055 LINC00052Q96N35 136 aa12.36□□□□□ -0.43
RPL28-209ENST00000560055 CSTL1Q9H114 145 aa12.36□□□□□ -0.43
RPL28-209ENST00000560055 TIMM9Q9Y5J7 89 aa12.36□□□□□ -0.43
RPL28-209ENST00000560055 HLA-DRB4P13762 266 aa12.35□□□□□ -0.43
RPL28-209ENST00000560055 CXCL2P19875 107 aa12.35□□□□□ -0.43
RPL28-209ENST00000560055 DEFB1P60022 68 aa12.35□□□□□ -0.43
RPL28-209ENST00000560055 FAM78BQ5VT40 261 aa12.35□□□□□ -0.43
RPL28-209ENST00000560055 FOXI2Q6ZQN5 318 aa12.35□□□□□ -0.43
RPL28-209ENST00000560055 HRH4Q9H3N8 390 aa12.35□□□□□ -0.43
RPL28-209ENST00000560055 SAV1Q9H4B6 383 aaPredicted RBP12.35□□□□□ -0.43
RPL28-209ENST00000560055 TMEM14CQ9P0S9 112 aa12.35□□□□□ -0.43
RPL28-209ENST00000560055 RFNGQ9Y644 331 aa12.35□□□□□ -0.43
RPL28-209ENST00000560055 HLA-DRB4X5D2U9 266 aa12.35□□□□□ -0.43
RPL28-209ENST00000560055 RYR3Q15413 4870 aa12.34□□□□□ -0.43
RPL28-209ENST00000560055 H3BMM0 161 aa12.34□□□□□ -0.43
RPL28-209ENST00000560055 H3BQ15 152 aa12.34□□□□□ -0.43
RPL28-209ENST00000560055 GIG44P09565 113 aaPredicted RBP12.34□□□□□ -0.43
RPL28-209ENST00000560055 FFAR4Q5NUL3 377 aa12.34□□□□□ -0.43
RPL28-209ENST00000560055 GDF5OSQ5U4N7 250 aa12.34□□□□□ -0.43
RPL28-209ENST00000560055 SPATA31B1PQ5VZV4 182 aa12.34□□□□□ -0.43
RPL28-209ENST00000560055 LCN15Q6UWW0 184 aa12.34□□□□□ -0.43
RPL28-209ENST00000560055 FAM167A-AS1Q96KT0 104 aa12.34□□□□□ -0.43
RPL28-209ENST00000560055 OVOL2Q9BRP0 275 aa12.34□□□□□ -0.43
RPL28-209ENST00000560055 MRPL32Q9BYC8 188 aaKnown RBP12.34□□□□□ -0.43
RPL28-209ENST00000560055 TP53TG1Q9Y2A0 90 aa12.34□□□□□ -0.43
RPL28-209ENST00000560055 ARPC5O15511 151 aa12.33□□□□□ -0.44
RPL28-209ENST00000560055 IGFL4Q6B9Z1 124 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms