RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 RTL9Q8NET4 1388 aa1.84□□□□□ -2.12
SPG11-218ENST00000559754 MYLKQ15746 1914 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 SOGA1O94964 1423 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 IGLV3-9A0A075B6K5 115 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 TMSB15BA0A087X1C1 80 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 TIMM17BO60830 172 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 PGLYRP1O75594 196 aaPredicted RBP1.83□□□□□ -2.12
SPG11-218ENST00000559754 CTSDP07339 412 aaPredicted RBP1.83□□□□□ -2.12
SPG11-218ENST00000559754 CSRP1P21291 193 aaKnown RBP1.83□□□□□ -2.12
SPG11-218ENST00000559754 EVI2AP22794 236 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 PEBP1P30086 187 aaKnown RBP1.83□□□□□ -2.12
SPG11-218ENST00000559754 RELAQ04206 551 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 SPANXN5Q5MJ07 72 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 Q5XG85 94 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 PATE2Q6UY27 113 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 ZNF826PQ6ZT77 177 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 LINC00305Q7Z4B0 112 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 LRRC28Q86X40 367 aaPredicted RBP1.83□□□□□ -2.12
SPG11-218ENST00000559754 LRRC18Q8N456 261 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 OR51A4Q8NGJ6 313 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 ZNF714Q96N38 554 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 C20orf166-AS1Q96NR2 134 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 MCEEQ96PE7 176 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 TAS2R4Q9NYW5 299 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 CDK5RAP2Q96SN8 1893 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 ADAMTS7Q9UKP4 1686 aa1.83□□□□□ -2.12
SPG11-218ENST00000559754 KIAA2026Q5HYC2 2103 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 TCOF1Q13428 1488 aaKnown RBP1.82□□□□□ -2.12
SPG11-218ENST00000559754 WDR7Q9Y4E6 1490 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 SHANK1Q9Y566 2161 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 TRAV13-1A0A0B4J241 112 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 A0A1B0GW64 132 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 LY6LH3BQJ8 138 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 K7ERJ3 54 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 SULT1C4O75897 302 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 PMP2P02689 132 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 C1QCP02747 245 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 ZNF345Q14585 488 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 SS18Q15532 418 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 ESRGQ1W209 222 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 C4orf22Q6V702 233 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 Q6ZTI0 123 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 OR4X2Q8NGF9 303 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 OR8B3Q8NGG8 313 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 RNASE11Q8TAA1 199 aaKnown RBP1.82□□□□□ -2.12
SPG11-218ENST00000559754 CBLN4Q9NTU7 201 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 OVOS2A0A0J9YW53 1432 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 OVOS2Q6IE36 1432 aa1.82□□□□□ -2.12
SPG11-218ENST00000559754 FRMPD1Q5SYB0 1578 aa1.81□□□□□ -2.12
SPG11-218ENST00000559754 A0A096LPI6 279 aa1.81□□□□□ -2.12
SPG11-218ENST00000559754 TRBV27A0A0K0K1C4 114 aa1.81□□□□□ -2.12
SPG11-218ENST00000559754 C5orf58C9J3I9 102 aa1.81□□□□□ -2.12
SPG11-218ENST00000559754 E7EQL1 145 aa1.81□□□□□ -2.12
SPG11-218ENST00000559754 FNDC10F2Z333 226 aa1.81□□□□□ -2.12
SPG11-218ENST00000559754 H3BMG7 143 aa1.81□□□□□ -2.12
SPG11-218ENST00000559754 K7EP13 123 aa1.81□□□□□ -2.12
SPG11-218ENST00000559754 RER1O15258 196 aa1.81□□□□□ -2.12
SPG11-218ENST00000559754 IGKV4-1P06312 121 aa1.81□□□□□ -2.12
SPG11-218ENST00000559754 ZNF705BP0CI00 300 aaPredicted RBP1.81□□□□□ -2.12
SPG11-218ENST00000559754 RNASE2P10153 161 aaKnown RBP1.81□□□□□ -2.12
SPG11-218ENST00000559754 RPL22P35268 128 aaKnown RBP1.81□□□□□ -2.12
SPG11-218ENST00000559754 KLRD1Q13241 179 aa1.81□□□□□ -2.12
SPG11-218ENST00000559754 C7orf65Q6ZTY9 151 aa1.81□□□□□ -2.12
SPG11-218ENST00000559754 OR5A2Q8NGI9 324 aa1.81□□□□□ -2.12
SPG11-218ENST00000559754 NAT14Q8WUY8 206 aa1.81□□□□□ -2.12
SPG11-218ENST00000559754 MAGOHBQ96A72 148 aaKnown RBP1.81□□□□□ -2.12
SPG11-218ENST00000559754 ZC2HC1AQ96GY0 325 aa1.81□□□□□ -2.12
SPG11-218ENST00000559754 U3KQ87 197 aa1.81□□□□□ -2.12
SPG11-218ENST00000559754 IGKV1D-42A0A075B6H8 117 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 PAEPP09466 180 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 BAALC-AS2P0C853 105 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 HIST1H1AQ02539 215 aaPredicted RBP1.8□□□□□ -2.12
SPG11-218ENST00000559754 TAF9Q16594 264 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 TEX29Q8N6K0 151 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 OR4S1Q8NGB4 309 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 OR4B1Q8NGF8 309 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 OR4K15Q8NH41 348 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 ZNF418Q8TF45 676 aaPredicted RBP1.8□□□□□ -2.12
SPG11-218ENST00000559754 BRK1Q8WUW1 75 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 C1orf54Q8WWF1 131 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 DIRC1Q969H9 104 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 PRELID3AQ96N28 172 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 VPS25Q9BRG1 176 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 C14orf132Q9NPU4 83 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 OR5AC2Q9NZP5 309 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 RFX7Q2KHR2 1363 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 KIAA1107Q9UPP5 1409 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 GLI3P10071 1580 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 COL4A2P08572 1712 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 PLXNA3P51805 1871 aa1.8□□□□□ -2.12
SPG11-218ENST00000559754 ZFC3H1O60293 1989 aaKnown RBP1.79□□□□□ -2.12
SPG11-218ENST00000559754 TANC2Q9HCD6 1990 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 IBA57-AS1B1ANH7 110 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 OR1I1O60431 355 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 MT-ND6P03923 174 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 MIFP14174 115 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 RPL26P61254 145 aaKnown RBP1.79□□□□□ -2.12
SPG11-218ENST00000559754 ZNF181Q2M3W8 571 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 TMEM155Q4W5P6 130 aa1.79□□□□□ -2.12
SPG11-218ENST00000559754 RPL13AP3Q6NVV1 102 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms