RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 SUB1P53999 127 aaKnown RBP eCLIP6.13□□□□□ -1.43
SNRPA1-208ENST00000559686 PAX9P55771 341 aa6.13□□□□□ -1.43
SNRPA1-208ENST00000559686 LBHQ53QV2 105 aaPredicted RBP6.13□□□□□ -1.43
SNRPA1-208ENST00000559686 BAP18Q8IXM2 172 aa6.13□□□□□ -1.43
SNRPA1-208ENST00000559686 OR4D10Q8NGI6 311 aa6.13□□□□□ -1.43
SNRPA1-208ENST00000559686 OR6F1Q8NGZ6 308 aa6.13□□□□□ -1.43
SNRPA1-208ENST00000559686 RNASE8Q8TDE3 154 aaKnown RBP6.13□□□□□ -1.43
SNRPA1-208ENST00000559686 SEC22AQ96IW7 307 aa6.13□□□□□ -1.43
SNRPA1-208ENST00000559686 IGF2BP2-AS1Q96M15 143 aa6.13□□□□□ -1.43
SNRPA1-208ENST00000559686 SEC22CQ9BRL7 303 aa6.13□□□□□ -1.43
SNRPA1-208ENST00000559686 ZNF2Q9BSG1 426 aaPredicted RBP6.13□□□□□ -1.43
SNRPA1-208ENST00000559686 UPK3BQ9BT76 320 aa6.13□□□□□ -1.43
SNRPA1-208ENST00000559686 DAPK2Q9UIK4 370 aa6.13□□□□□ -1.43
SNRPA1-208ENST00000559686 DNAH8Q96JB1 4490 aa6.13□□□□□ -1.43
SNRPA1-208ENST00000559686 TRAV12-2A0A075B6T6 113 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 TRAV30A0A087WSZ9 112 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 PLAC8L1A1L4L8 177 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 FAM25AB3EWG3 89 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 FAM25CB3EWG5 89 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 FAM25GB3EWG6 89 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 CORTO00230 105 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 BUB3O43684 328 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 RAB3DO95716 219 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 IGKV1-39P01597 117 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 PMP2P02689 132 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 PLA2G1BP04054 148 aaKnown RBP6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 IGKV1D-39P04432 117 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 OR10J1P30954 320 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 RPL5P46777 297 aaKnown RBP6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 RFX2P48378 723 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 PSMB3P49720 205 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 MLLT11Q13015 90 aaPredicted RBP6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 LCE4AQ5TA78 99 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 CMTM1Q8IZ96 169 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 OR5AP2Q8NGF4 316 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 OR51G1Q8NGK1 321 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 OR1S2Q8NGQ3 325 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 RXFP4Q8TDU9 374 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 DEFB104AQ8WTQ1 72 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 GPR146Q96CH1 333 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 RRNAD1Q96FB5 475 aaKnown RBP6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 C12orf57Q99622 126 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 PBDC1Q9BVG4 233 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 FXYD6Q9H0Q3 95 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 RBM38Q9H0Z9 239 aaKnown RBP6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 VCX2Q9H322 139 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 ACOT13Q9NPJ3 140 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 KLK11Q9UBX7 282 aa6.12□□□□□ -1.43
SNRPA1-208ENST00000559686 IGLV5-52A0A0A0MRZ9 124 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 TRAV1-2A0A0B4J238 106 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 A0A0J9YX75 114 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 LINC00587B1AMM8 73 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 ZNF701M0R085 212 aaPredicted RBP6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 SIVA1O15304 175 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 GSTZ1O43708 216 aaPredicted RBP6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 INSP01308 110 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 IGLC1P0CG04 106 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 ELK1P19419 428 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 HOXA5P20719 270 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 PTTG1IPP53801 180 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 C22orf42Q6IC83 251 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 TBC1D26Q86UD7 250 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 C20orf173Q96LM9 149 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 LINC01587Q99440 93 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 MGLLQ99685 303 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 TREM1Q9NP99 234 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 ENY2Q9NPA8 101 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 NOP10Q9NPE3 64 aaKnown RBP6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 IFT46Q9NQC8 304 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 SCN3BQ9NY72 215 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 FAM30AQ9NZY2 134 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 DOK5Q9P104 306 aa6.11□□□□□ -1.43
SNRPA1-208ENST00000559686 H3BS24 57 aa6.1□□□□□ -1.43
SNRPA1-208ENST00000559686 GPR31O00270 319 aa6.1□□□□□ -1.43
SNRPA1-208ENST00000559686 SCGNO76038 276 aa6.1□□□□□ -1.43
SNRPA1-208ENST00000559686 FABP1P07148 127 aa6.1□□□□□ -1.43
SNRPA1-208ENST00000559686 OR4E1P0C645 316 aa6.1□□□□□ -1.43
SNRPA1-208ENST00000559686 P0C879 139 aa6.1□□□□□ -1.43
SNRPA1-208ENST00000559686 PRB4P10163 310 aaPredicted RBP6.1□□□□□ -1.43
SNRPA1-208ENST00000559686 S100PP25815 95 aa6.1□□□□□ -1.43
SNRPA1-208ENST00000559686 PRSS54Q6PEW0 395 aa6.1□□□□□ -1.43
SNRPA1-208ENST00000559686 AMTNQ6UX39 209 aa6.1□□□□□ -1.43
SNRPA1-208ENST00000559686 ACY3Q96HD9 319 aa6.1□□□□□ -1.43
SNRPA1-208ENST00000559686 TMEM70Q9BUB7 260 aa6.1□□□□□ -1.43
SNRPA1-208ENST00000559686 PDCD10Q9BUL8 212 aa6.1□□□□□ -1.43
SNRPA1-208ENST00000559686 SLC25A39Q9BZJ4 359 aaPredicted RBP6.1□□□□□ -1.43
SNRPA1-208ENST00000559686 RPRMQ9NS64 109 aa6.1□□□□□ -1.43
SNRPA1-208ENST00000559686 RSL24D1Q9UHA3 163 aaKnown RBP6.1□□□□□ -1.43
SNRPA1-208ENST00000559686 RNF213Q63HN8 5207 aa6.1□□□□□ -1.43
SNRPA1-208ENST00000559686 GAGE12BA1L429 117 aa6.09□□□□□ -1.43
SNRPA1-208ENST00000559686 SOCS3O14543 225 aa6.09□□□□□ -1.43
SNRPA1-208ENST00000559686 CRXO43186 299 aaPredicted RBP6.09□□□□□ -1.43
SNRPA1-208ENST00000559686 GAGE7O76087 117 aa6.09□□□□□ -1.43
SNRPA1-208ENST00000559686 GAGE12FP0CL80 117 aa6.09□□□□□ -1.43
SNRPA1-208ENST00000559686 GAGE12GP0CL81 117 aa6.09□□□□□ -1.43
SNRPA1-208ENST00000559686 GAGE12IP0CL82 117 aa6.09□□□□□ -1.43
SNRPA1-208ENST00000559686 RD3LP0DJH9 198 aa6.09□□□□□ -1.43
SNRPA1-208ENST00000559686 MEOX2P50222 304 aa6.09□□□□□ -1.43
SNRPA1-208ENST00000559686 TAS2R60P59551 318 aa6.09□□□□□ -1.43
SNRPA1-208ENST00000559686 YPEL3P61236 119 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms