RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 SMIM23A6NLE4 172 aa-0.11□□□□□ -2.43
CASC4-210ENST00000559550 RPP14O95059 124 aaKnown RBP-0.11□□□□□ -2.43
CASC4-210ENST00000559550 CXCL8P10145 99 aa-0.11□□□□□ -2.43
CASC4-210ENST00000559550 KDELR1P24390 212 aa-0.11□□□□□ -2.43
CASC4-210ENST00000559550 PTRHD1Q6GMV3 140 aaKnown RBP-0.11□□□□□ -2.43
CASC4-210ENST00000559550 CANT1Q8WVQ1 401 aa-0.11□□□□□ -2.43
CASC4-210ENST00000559550 CCDC94Q9BW85 323 aaPredicted RBP-0.11□□□□□ -2.43
CASC4-210ENST00000559550 SPRR2GQ9BYE4 73 aa-0.11□□□□□ -2.43
CASC4-210ENST00000559550 RFX7Q2KHR2 1363 aa-0.11□□□□□ -2.43
CASC4-210ENST00000559550 MYH7BA7E2Y1 1941 aa-0.11□□□□□ -2.43
CASC4-210ENST00000559550 BCL9O00512 1426 aa-0.12□□□□□ -2.43
CASC4-210ENST00000559550 TPRP12270 2363 aaKnown RBP-0.12□□□□□ -2.43
CASC4-210ENST00000559550 SIP14410 1827 aa-0.12□□□□□ -2.43
CASC4-210ENST00000559550 A0A087WSZ3 146 aa-0.12□□□□□ -2.43
CASC4-210ENST00000559550 TRBV30A0A0K0K1B3 111 aa-0.12□□□□□ -2.43
CASC4-210ENST00000559550 C5orf67F2Z3F1 127 aa-0.12□□□□□ -2.43
CASC4-210ENST00000559550 JMJD7-PLA2G4BH0Y9G9 81 aa-0.12□□□□□ -2.43
CASC4-210ENST00000559550 NIPSNAP2O75323 286 aa-0.12□□□□□ -2.43
CASC4-210ENST00000559550 HAND1O96004 215 aa-0.12□□□□□ -2.43
CASC4-210ENST00000559550 IGLV1-51P01701 117 aa-0.12□□□□□ -2.43
CASC4-210ENST00000559550 CD14P08571 375 aa-0.12□□□□□ -2.43
CASC4-210ENST00000559550 CDK6Q00534 326 aa-0.12□□□□□ -2.43
CASC4-210ENST00000559550 SPATA45Q537H7 98 aa-0.12□□□□□ -2.43
CASC4-210ENST00000559550 TMEM97Q5BJF2 176 aa-0.12□□□□□ -2.43
CASC4-210ENST00000559550 Q6ZS92 163 aa-0.12□□□□□ -2.43
CASC4-210ENST00000559550 OR8J2Q8NGG1 315 aa-0.12□□□□□ -2.43
CASC4-210ENST00000559550 OR10AC1Q8NH08 325 aa-0.12□□□□□ -2.43
CASC4-210ENST00000559550 RAB37Q96AX2 223 aa-0.12□□□□□ -2.43
CASC4-210ENST00000559550 YPEL2Q96QA6 119 aa-0.12□□□□□ -2.43
CASC4-210ENST00000559550 FMN1Q68DA7 1419 aa-0.13□□□□□ -2.43
CASC4-210ENST00000559550 FANCMQ8IYD8 2048 aa-0.13□□□□□ -2.43
CASC4-210ENST00000559550 COL7A1Q02388 2944 aa-0.13□□□□□ -2.43
CASC4-210ENST00000559550 TRAV23DV6A0A075B6W5 121 aa-0.13□□□□□ -2.43
CASC4-210ENST00000559550 TAX1BP3O14907 124 aa-0.13□□□□□ -2.43
CASC4-210ENST00000559550 ERP29P30040 261 aaKnown RBP-0.13□□□□□ -2.43
CASC4-210ENST00000559550 ATP5G3P48201 142 aa-0.13□□□□□ -2.43
CASC4-210ENST00000559550 PBOV1Q9GZY1 135 aa-0.13□□□□□ -2.43
CASC4-210ENST00000559550 PARVBQ9HBI1 364 aa-0.13□□□□□ -2.43
CASC4-210ENST00000559550 FREM3P0C091 2139 aa-0.13□□□□□ -2.43
CASC4-210ENST00000559550 TRBV19A0A075B6N1 114 aa-0.14□□□□□ -2.43
CASC4-210ENST00000559550 TMEM256-PLSCR3K7ERE1 68 aa-0.14□□□□□ -2.43
CASC4-210ENST00000559550 M0R233 179 aa-0.14□□□□□ -2.43
CASC4-210ENST00000559550 FXYD4P59646 89 aa-0.14□□□□□ -2.43
CASC4-210ENST00000559550 ITGB3BPQ13352 177 aaPredicted RBP-0.14□□□□□ -2.43
CASC4-210ENST00000559550 BCL2L15Q5TBC7 163 aa-0.14□□□□□ -2.43
CASC4-210ENST00000559550 OTUD6BQ8N6M0 293 aa-0.14□□□□□ -2.43
CASC4-210ENST00000559550 ZNF431Q8TF32 576 aaPredicted RBP-0.14□□□□□ -2.43
CASC4-210ENST00000559550 POP5Q969H6 163 aaKnown RBP-0.14□□□□□ -2.43
CASC4-210ENST00000559550 MUCL1Q96DR8 90 aa-0.14□□□□□ -2.43
CASC4-210ENST00000559550 JPT1Q9UK76 154 aa-0.14□□□□□ -2.43
CASC4-210ENST00000559550 MACF1Q9UPN3 7388 aaKnown RBP-0.14□□□□□ -2.43
CASC4-210ENST00000559550 PTPRZ1P23471 2315 aaPredicted RBP-0.14□□□□□ -2.43
CASC4-210ENST00000559550 ZGRF1Q86YA3 2104 aa-0.14□□□□□ -2.43
CASC4-210ENST00000559550 CEBPGP53567 150 aa-0.15□□□□□ -2.43
CASC4-210ENST00000559550 UBE2BP63146 152 aa-0.15□□□□□ -2.43
CASC4-210ENST00000559550 PATE2Q6UY27 113 aa-0.15□□□□□ -2.43
CASC4-210ENST00000559550 OR5AS1Q8N127 324 aa-0.15□□□□□ -2.43
CASC4-210ENST00000559550 GNPDA2Q8TDQ7 276 aa-0.15□□□□□ -2.43
CASC4-210ENST00000559550 SIGMAR1Q99720 223 aa-0.15□□□□□ -2.43
CASC4-210ENST00000559550 KIFC1Q9BW19 673 aa-0.15□□□□□ -2.43
CASC4-210ENST00000559550 OR52A1Q9UKL2 312 aa-0.15□□□□□ -2.43
CASC4-210ENST00000559550 IGF2RP11717 2491 aa-0.15□□□□□ -2.43
CASC4-210ENST00000559550 PTPRFP10586 1907 aa-0.16□□□□□ -2.43
CASC4-210ENST00000559550 HRNRQ86YZ3 2850 aaPredicted RBP-0.16□□□□□ -2.43
CASC4-210ENST00000559550 ZNF727A8MUV8 499 aa-0.16□□□□□ -2.44
CASC4-210ENST00000559550 C17orf112F2Z3M2 114 aa-0.16□□□□□ -2.44
CASC4-210ENST00000559550 CST8O60676 142 aa-0.16□□□□□ -2.44
CASC4-210ENST00000559550 OR7C1O76099 320 aaPredicted RBP-0.16□□□□□ -2.44
CASC4-210ENST00000559550 MYL5Q02045 173 aa-0.16□□□□□ -2.44
CASC4-210ENST00000559550 EIF5AL1Q6IS14 154 aaKnown RBP-0.16□□□□□ -2.44
CASC4-210ENST00000559550 SPINK6Q6UWN8 80 aa-0.16□□□□□ -2.44
CASC4-210ENST00000559550 PLAC4Q8WY50 150 aa-0.16□□□□□ -2.44
CASC4-210ENST00000559550 NPCDR1Q9BY65 106 aa-0.16□□□□□ -2.44
CASC4-210ENST00000559550 IMUPQ9GZP8 106 aa-0.16□□□□□ -2.44
CASC4-210ENST00000559550 MGAMO43451 1857 aa-0.16□□□□□ -2.44
CASC4-210ENST00000559550 PLB1Q6P1J6 1458 aa-0.16□□□□□ -2.44
CASC4-210ENST00000559550 NCOR2Q9Y618 2525 aa-0.17□□□□□ -2.44
CASC4-210ENST00000559550 HLA-EP13747 358 aa-0.17□□□□□ -2.44
CASC4-210ENST00000559550 DYNLT3P51808 116 aa-0.17□□□□□ -2.44
CASC4-210ENST00000559550 TMEM14EPQ6UXP3 125 aa-0.17□□□□□ -2.44
CASC4-210ENST00000559550 Q86TA4 180 aa-0.17□□□□□ -2.44
CASC4-210ENST00000559550 OR5D16Q8NGK9 328 aa-0.17□□□□□ -2.44
CASC4-210ENST00000559550 OR10AG1Q8NH19 301 aa-0.17□□□□□ -2.44
CASC4-210ENST00000559550 ARL5BQ96KC2 179 aa-0.17□□□□□ -2.44
CASC4-210ENST00000559550 SPTBP11277 2137 aa-0.17□□□□□ -2.44
CASC4-210ENST00000559550 KIF1BO60333 1816 aa-0.17□□□□□ -2.44
CASC4-210ENST00000559550 FAM159BA6NKW6 160 aa-0.18□□□□□ -2.44
CASC4-210ENST00000559550 OR10J4P0C629 311 aa-0.18□□□□□ -2.44
CASC4-210ENST00000559550 CCL4P13236 92 aa-0.18□□□□□ -2.44
CASC4-210ENST00000559550 EIF3IQ13347 325 aaKnown RBP-0.18□□□□□ -2.44
CASC4-210ENST00000559550 ARPINQ7Z6K5 226 aa-0.18□□□□□ -2.44
CASC4-210ENST00000559550 TEX37Q96LM6 180 aa-0.18□□□□□ -2.44
CASC4-210ENST00000559550 PRAP1Q96NZ9 151 aa-0.18□□□□□ -2.44
CASC4-210ENST00000559550 OPTCQ9UBM4 332 aa-0.18□□□□□ -2.44
CASC4-210ENST00000559550 ARL5AQ9Y689 179 aa-0.18□□□□□ -2.44
CASC4-210ENST00000559550 GGCTO75223 188 aaKnown RBP-0.19□□□□□ -2.44
CASC4-210ENST00000559550 CYBAP13498 195 aa-0.19□□□□□ -2.44
CASC4-210ENST00000559550 RAB5CP51148 216 aa-0.19□□□□□ -2.44
CASC4-210ENST00000559550 MYL6P60660 151 aa-0.19□□□□□ -2.44
CASC4-210ENST00000559550 OCIAD2Q56VL3 154 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms