RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.13□□□□□ -0.31
SPG11-215ENST00000559193 LY6LH3BQJ8 138 aa13.13□□□□□ -0.31
SPG11-215ENST00000559193 CRXO43186 299 aaPredicted RBP13.13□□□□□ -0.31
SPG11-215ENST00000559193 HINT1P49773 126 aaPredicted RBP13.13□□□□□ -0.31
SPG11-215ENST00000559193 LDLRAD2Q5SZI1 272 aa13.13□□□□□ -0.31
SPG11-215ENST00000559193 K7EIM0 57 aa13.12□□□□□ -0.31
SPG11-215ENST00000559193 CHEK1O14757 476 aa13.12□□□□□ -0.31
SPG11-215ENST00000559193 PLGLAQ15195 96 aa13.12□□□□□ -0.31
SPG11-215ENST00000559193 C17orf77Q96MU5 243 aa13.12□□□□□ -0.31
SPG11-215ENST00000559193 DMXL2Q8TDJ6 3036 aa13.12□□□□□ -0.31
SPG11-215ENST00000559193 TRBV6-1A0A0K0K1D8 114 aa13.12□□□□□ -0.31
SPG11-215ENST00000559193 HAX1O00165 279 aa13.12□□□□□ -0.31
SPG11-215ENST00000559193 CD3EP07766 207 aa13.12□□□□□ -0.31
SPG11-215ENST00000559193 OR4F17Q8NGA8 305 aa13.12□□□□□ -0.31
SPG11-215ENST00000559193 ZC2HC1AQ96GY0 325 aa13.12□□□□□ -0.31
SPG11-215ENST00000559193 NDFIP1Q9BT67 221 aa13.12□□□□□ -0.31
SPG11-215ENST00000559193 SHANK2-AS3Q9BTD1 123 aa13.12□□□□□ -0.31
SPG11-215ENST00000559193 C1RLQ9NZP8 487 aa13.12□□□□□ -0.31
SPG11-215ENST00000559193 APC2O95996 2303 aa13.11□□□□□ -0.31
SPG11-215ENST00000559193 TRBV19A0A075B6N1 114 aa13.11□□□□□ -0.31
SPG11-215ENST00000559193 PRB4P10163 310 aaPredicted RBP13.11□□□□□ -0.31
SPG11-215ENST00000559193 TCF15Q12870 199 aa13.11□□□□□ -0.31
SPG11-215ENST00000559193 ASCL2Q99929 193 aa13.11□□□□□ -0.31
SPG11-215ENST00000559193 ACACAQ13085 2346 aa13.11□□□□□ -0.31
SPG11-215ENST00000559193 OR4C46A6NHA9 309 aa13.11□□□□□ -0.31
SPG11-215ENST00000559193 H3BRN7 92 aa13.11□□□□□ -0.31
SPG11-215ENST00000559193 SYS1-DBNDD2H3BUS1 97 aa13.11□□□□□ -0.31
SPG11-215ENST00000559193 SIAH2O43255 324 aa13.11□□□□□ -0.31
SPG11-215ENST00000559193 SCNM1Q9BWG6 230 aa13.11□□□□□ -0.31
SPG11-215ENST00000559193 ABCA1O95477 2261 aa13.11□□□□□ -0.31
SPG11-215ENST00000559193 TIMM23O14925 209 aa13.1□□□□□ -0.31
SPG11-215ENST00000559193 RNF5Q99942 180 aa13.1□□□□□ -0.31
SPG11-215ENST00000559193 TP73-AS1Q9UF72 201 aa13.1□□□□□ -0.31
SPG11-215ENST00000559193 LEPROTL1O95214 131 aa13.1□□□□□ -0.31
SPG11-215ENST00000559193 CNIH1O95406 144 aa13.1□□□□□ -0.31
SPG11-215ENST00000559193 SIGLEC15Q6ZMC9 328 aa13.1□□□□□ -0.31
SPG11-215ENST00000559193 TMEM75Q8N9X5 138 aa13.1□□□□□ -0.31
SPG11-215ENST00000559193 SRSF8Q9BRL6 282 aaKnown RBP13.1□□□□□ -0.31
SPG11-215ENST00000559193 ZNF138P52744 262 aa13.09□□□□□ -0.31
SPG11-215ENST00000559193 DMRTA1Q5VZB9 504 aa13.09□□□□□ -0.31
SPG11-215ENST00000559193 BPIFA4PQ86YQ2 179 aa13.09□□□□□ -0.31
SPG11-215ENST00000559193 GVINP1Q7Z2Y8 2422 aa13.09□□□□□ -0.31
SPG11-215ENST00000559193 HLA-DRB1P01911 266 aa13.09□□□□□ -0.31
SPG11-215ENST00000559193 ONECUT1Q9UBC0 465 aa13.09□□□□□ -0.31
SPG11-215ENST00000559193 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.08□□□□□ -0.32
SPG11-215ENST00000559193 ARMS2P0C7Q2 107 aa13.08□□□□□ -0.32
SPG11-215ENST00000559193 MUC15Q8N387 334 aa13.08□□□□□ -0.32
SPG11-215ENST00000559193 ZNF491Q8N8L2 437 aa13.08□□□□□ -0.32
SPG11-215ENST00000559193 IGFBPL1Q8WX77 278 aa13.08□□□□□ -0.32
SPG11-215ENST00000559193 PIEZO2Q9H5I5 2752 aa13.08□□□□□ -0.32
SPG11-215ENST00000559193 MRPS12O15235 138 aaKnown RBP13.08□□□□□ -0.32
SPG11-215ENST00000559193 UNQ5815/PRO19632Q6UWF5 114 aa13.08□□□□□ -0.32
SPG11-215ENST00000559193 Q6ZVH6 145 aa13.08□□□□□ -0.32
SPG11-215ENST00000559193 LINC01560Q8TB33 94 aa13.08□□□□□ -0.32
SPG11-215ENST00000559193 A0A1B0GUT8 65 aa13.07□□□□□ -0.32
SPG11-215ENST00000559193 ZZEF1O43149 2961 aa13.07□□□□□ -0.32
SPG11-215ENST00000559193 RELQ04864 619 aaPredicted RBP13.07□□□□□ -0.32
SPG11-215ENST00000559193 RNF125Q96EQ8 232 aa13.07□□□□□ -0.32
SPG11-215ENST00000559193 PPP1R14DQ9NXH3 145 aa13.07□□□□□ -0.32
SPG11-215ENST00000559193 PSG8Q9UQ74 426 aa13.07□□□□□ -0.32
SPG11-215ENST00000559193 RIF1Q5UIP0 2472 aaKnown RBP13.07□□□□□ -0.32
SPG11-215ENST00000559193 hDV102S1A0JD36 115 aa13.07□□□□□ -0.32
SPG11-215ENST00000559193 IL4P05112 153 aa13.07□□□□□ -0.32
SPG11-215ENST00000559193 SFTPCP11686 197 aa13.07□□□□□ -0.32
SPG11-215ENST00000559193 HTR1DP28221 377 aa13.07□□□□□ -0.32
SPG11-215ENST00000559193 ORAOV1Q8WV07 137 aa13.07□□□□□ -0.32
SPG11-215ENST00000559193 ST20Q9HBF5 79 aa13.07□□□□□ -0.32
SPG11-215ENST00000559193 TCF21O43680 179 aa13.06□□□□□ -0.32
SPG11-215ENST00000559193 LIPFP07098 398 aa13.06□□□□□ -0.32
SPG11-215ENST00000559193 CRIP1P50238 77 aa13.06□□□□□ -0.32
SPG11-215ENST00000559193 PSG3Q16557 428 aa13.06□□□□□ -0.32
SPG11-215ENST00000559193 ZNF672Q499Z4 452 aaPredicted RBP13.06□□□□□ -0.32
SPG11-215ENST00000559193 FBLN7Q53RD9 439 aa13.06□□□□□ -0.32
SPG11-215ENST00000559193 KLF17Q5JT82 389 aaPredicted RBP13.06□□□□□ -0.32
SPG11-215ENST00000559193 S4R3C0 116 aa13.06□□□□□ -0.32
SPG11-215ENST00000559193 NBR2O15453 112 aa13.06□□□□□ -0.32
SPG11-215ENST00000559193 BCL6BQ8N143 479 aaPredicted RBP13.06□□□□□ -0.32
SPG11-215ENST00000559193 LYPD1Q8N2G4 141 aa13.06□□□□□ -0.32
SPG11-215ENST00000559193 LY6G5BQ8NDX9 201 aa13.06□□□□□ -0.32
SPG11-215ENST00000559193 TMEM190Q8WZ59 177 aa13.06□□□□□ -0.32
SPG11-215ENST00000559193 CFHR4Q92496 578 aa13.06□□□□□ -0.32
SPG11-215ENST00000559193 ZNF414Q96IQ9 312 aa13.06□□□□□ -0.32
SPG11-215ENST00000559193 TMUB1Q9BVT8 246 aa13.06□□□□□ -0.32
SPG11-215ENST00000559193 RNF24Q9Y225 148 aa13.06□□□□□ -0.32
SPG11-215ENST00000559193 POLEQ07864 2286 aa13.05□□□□□ -0.32
SPG11-215ENST00000559193 M0R3E3 92 aa13.05□□□□□ -0.32
SPG11-215ENST00000559193 CSN3P07498 182 aa13.05□□□□□ -0.32
SPG11-215ENST00000559193 OR5AL1P0C617 328 aa13.05□□□□□ -0.32
SPG11-215ENST00000559193 GATD1Q8NB37 220 aa13.05□□□□□ -0.32
SPG11-215ENST00000559193 VKORC1Q9BQB6 163 aa13.05□□□□□ -0.32
SPG11-215ENST00000559193 ZFHX2Q9C0A1 2572 aaPredicted RBP13.05□□□□□ -0.32
SPG11-215ENST00000559193 WI2-2373I1.2A0A1W2PRP0 233 aa13.05□□□□□ -0.32
SPG11-215ENST00000559193 HILPDAQ9Y5L2 63 aa13.05□□□□□ -0.32
SPG11-215ENST00000559193 GRNP28799 593 aaKnown RBP13.04□□□□□ -0.32
SPG11-215ENST00000559193 FCGR2BP31994 310 aaPredicted RBP13.04□□□□□ -0.32
SPG11-215ENST00000559193 RIGQ13278 110 aa13.04□□□□□ -0.32
SPG11-215ENST00000559193 TMEM191AQ9H0A3 160 aa13.04□□□□□ -0.32
SPG11-215ENST00000559193 COX11Q9Y6N1 276 aa13.04□□□□□ -0.32
SPG11-215ENST00000559193 K7EQM0 130 aa13.04□□□□□ -0.32
SPG11-215ENST00000559193 C21orf62-AS1Q17RA5 79 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms