RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 TCRBV4S1A1TA0A5B7 111 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 PRORSD1PA6NEY8 169 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 C5orf58C9J3I9 102 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 KPNA4O00629 521 aaPredicted RBP1.01□□□□□ -2.25
GABPB1-209ENST00000559100 LYRM1O43325 122 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 DHFRP00374 187 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 CD2P06729 351 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 RAB5CP51148 216 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 KRTAP12-1P59990 96 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 CDK6Q00534 326 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 EIF3IQ13347 325 aaKnown RBP1.01□□□□□ -2.25
GABPB1-209ENST00000559100 PDE6HQ13956 83 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 DEFB113Q30KQ7 82 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 TEX261Q6UWH6 196 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 C2orf82Q6UX34 121 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 TOMM20LQ6UXN7 152 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 C4orf22Q6V702 233 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 Q6ZRN7 208 aaPredicted RBP1.01□□□□□ -2.25
GABPB1-209ENST00000559100 PRR15Q8IV56 129 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 Q8IYB0 196 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 FAM216BQ8N7L0 139 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 OR5H6Q8NGV6 325 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 LZICQ8WZA0 190 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 CARD19Q96LW7 228 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 LXNQ9BS40 222 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 SPANXA1Q9NS26 97 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 KLK9Q9UKQ9 250 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 RNF11Q9Y3C5 154 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 MED31Q9Y3C7 131 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 SNURFQ9Y675 71 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 U3KQ87 197 aa1.01□□□□□ -2.25
GABPB1-209ENST00000559100 CACNA1GO43497 2377 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 ICE1Q9Y2F5 2266 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 CD109Q6YHK3 1445 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 TRBV6-8A0A0A6YYG3 113 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 J3QKU1 62 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 HYPMO75409 117 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 NBEAP1P0C6P0 100 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 RPL7P18124 248 aaKnown RBP1□□□□□ -2.25
GABPB1-209ENST00000559100 ZNF93P35789 620 aaPredicted RBP1□□□□□ -2.25
GABPB1-209ENST00000559100 KRTAP13-4Q3LI77 160 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 PCOTHQ58A44 107 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 FAM74A1Q5RGS3 127 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 C10orf55Q5SWW7 151 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 HRCT1Q6UXD1 115 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 PATE2Q6UY27 113 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 LINC00305Q7Z4B0 112 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 KRTAP13-1Q8IUC0 172 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 LRRC18Q8N456 261 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 OR4B1Q8NGF8 309 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 ZNF563Q8TA94 476 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 C4orf3Q8WVX3 66 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 POP5Q969H6 163 aaKnown RBP1□□□□□ -2.25
GABPB1-209ENST00000559100 RAB37Q96AX2 223 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 ZC2HC1AQ96GY0 325 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 GGACTQ9BVM4 153 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 LRTM1Q9HBL6 345 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 TAF1LQ8IZX4 1826 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 SMARCA4P51532 1647 aa1□□□□□ -2.25
GABPB1-209ENST00000559100 OBSL1O75147 1896 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 ARHGEF28Q8N1W1 1705 aaKnown RBP0.99□□□□□ -2.25
GABPB1-209ENST00000559100 IGKV2D-26A0A0A0MRZ7 120 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 IGKV2-29A2NJV5 120 aaPredicted RBP0.99□□□□□ -2.25
GABPB1-209ENST00000559100 H7BYZ3 331 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 J3KT08 172 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 DEGS1O15121 323 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 ERC2-IT1O76042 136 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 CMPK1P30085 196 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 POLR2HP52434 150 aaKnown RBP0.99□□□□□ -2.25
GABPB1-209ENST00000559100 KRTAP12-3P60328 96 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 CIRBPQ14011 172 aaKnown RBP0.99□□□□□ -2.25
GABPB1-209ENST00000559100 VMA21Q3ZAQ7 101 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 C1orf137Q5JT78 98 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 GKN2Q86XP6 184 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 TEX29Q8N6K0 151 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 C15orf53Q8NAA6 179 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 TMEM229BQ8NBD8 167 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 OR4C6Q8NH72 309 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 ZNF431Q8TF32 576 aaPredicted RBP0.99□□□□□ -2.25
GABPB1-209ENST00000559100 MUCL1Q96DR8 90 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 HYLS1Q96M11 299 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 PRELID3AQ96N28 172 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 TP53RKQ96S44 253 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 MED9Q9NWA0 146 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 SPANXCQ9NY87 97 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 TAS2R7Q9NYW3 318 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 TPRKBQ9Y3C4 175 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 HIVEP2P31629 2446 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 DOCK4Q8N1I0 1966 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 MYH3P11055 1940 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 MYH2Q9UKX2 1941 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 ARHGEF11O15085 1522 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 NCAPD3P42695 1498 aa0.99□□□□□ -2.25
GABPB1-209ENST00000559100 DOCK10Q96BY6 2186 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 STRCP1A6NGW2 1772 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 SCN8AQ9UQD0 1980 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 TRAV10A0A0B4J240 114 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 TRAV13-1A0A0B4J241 112 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 IGHV1-58A0A0C4DH39 117 aa0.98□□□□□ -2.25
GABPB1-209ENST00000559100 hDV103S1A0JD37 113 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms