RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 TMEM256Q8N2U0 113 aa6.57□□□□□ -1.36
SPG11-209ENST00000558253 ZNF491Q8N8L2 437 aa6.57□□□□□ -1.36
SPG11-209ENST00000558253 RNF125Q96EQ8 232 aa6.57□□□□□ -1.36
SPG11-209ENST00000558253 SAMD10Q9BYL1 202 aa6.57□□□□□ -1.36
SPG11-209ENST00000558253 SIRPDQ9H106 197 aa6.57□□□□□ -1.36
SPG11-209ENST00000558253 ZNF586Q9NXT0 402 aa6.57□□□□□ -1.36
SPG11-209ENST00000558253 C21orf62Q9NYP8 219 aa6.57□□□□□ -1.36
SPG11-209ENST00000558253 HILPDAQ9Y5L2 63 aa6.57□□□□□ -1.36
SPG11-209ENST00000558253 PRRC2CQ9Y520 2896 aaKnown RBP6.57□□□□□ -1.36
SPG11-209ENST00000558253 GVINP1Q7Z2Y8 2422 aa6.57□□□□□ -1.36
SPG11-209ENST00000558253 RIF1Q5UIP0 2472 aaKnown RBP6.56□□□□□ -1.36
SPG11-209ENST00000558253 C20orf202A1L168 122 aa6.56□□□□□ -1.36
SPG11-209ENST00000558253 NPIPB6E9PJ23 425 aa6.56□□□□□ -1.36
SPG11-209ENST00000558253 SERF1AO75920 110 aa6.56□□□□□ -1.36
SPG11-209ENST00000558253 TOX4O94842 621 aa6.56□□□□□ -1.36
SPG11-209ENST00000558253 IGHV3-48P01763 117 aa6.56□□□□□ -1.36
SPG11-209ENST00000558253 GPX1P07203 203 aa6.56□□□□□ -1.36
SPG11-209ENST00000558253 IGLC2P0DOY2 106 aa6.56□□□□□ -1.36
SPG11-209ENST00000558253 TMEM11P17152 192 aa6.56□□□□□ -1.36
SPG11-209ENST00000558253 RPL7P18124 248 aaKnown RBP6.56□□□□□ -1.36
SPG11-209ENST00000558253 CSN1S1P47710 185 aa6.56□□□□□ -1.36
SPG11-209ENST00000558253 HBBP68871 147 aa6.56□□□□□ -1.36
SPG11-209ENST00000558253 LEMD1Q68G75 181 aa6.56□□□□□ -1.36
SPG11-209ENST00000558253 TEX43Q6ZNM6 134 aa6.56□□□□□ -1.36
SPG11-209ENST00000558253 RBPMS2Q6ZRY4 209 aaKnown RBP6.56□□□□□ -1.36
SPG11-209ENST00000558253 NUP35Q8NFH5 326 aa6.56□□□□□ -1.36
SPG11-209ENST00000558253 LINC00479Q96M42 142 aa6.56□□□□□ -1.36
SPG11-209ENST00000558253 AAMDCQ9H7C9 122 aa6.56□□□□□ -1.36
SPG11-209ENST00000558253 ARFGEF3Q5TH69 2177 aa6.55□□□□□ -1.36
SPG11-209ENST00000558253 TRAV34A0A0B4J273 112 aa6.55□□□□□ -1.36
SPG11-209ENST00000558253 A0A1B0GXF2 115 aa6.55□□□□□ -1.36
SPG11-209ENST00000558253 NCBP2LA6PVI3 153 aaKnown RBP6.55□□□□□ -1.36
SPG11-209ENST00000558253 HIGD1CA8MV81 97 aa6.55□□□□□ -1.36
SPG11-209ENST00000558253 BMPR1BO00238 502 aa6.55□□□□□ -1.36
SPG11-209ENST00000558253 PMCHP20382 165 aa6.55□□□□□ -1.36
SPG11-209ENST00000558253 CDSNQ15517 529 aa6.55□□□□□ -1.36
SPG11-209ENST00000558253 LDLRAD2Q5SZI1 272 aa6.55□□□□□ -1.36
SPG11-209ENST00000558253 C16orf54Q6UWD8 224 aa6.55□□□□□ -1.36
SPG11-209ENST00000558253 ZNF705AQ6ZN79 300 aaPredicted RBP6.55□□□□□ -1.36
SPG11-209ENST00000558253 COX8CQ7Z4L0 72 aa6.55□□□□□ -1.36
SPG11-209ENST00000558253 Q86TA4 180 aa6.55□□□□□ -1.36
SPG11-209ENST00000558253 KLHDC1Q8N7A1 406 aa6.55□□□□□ -1.36
SPG11-209ENST00000558253 FAM110DQ8TAY7 271 aaPredicted RBP6.55□□□□□ -1.36
SPG11-209ENST00000558253 ITLN2Q8WWU7 325 aaPredicted RBP6.55□□□□□ -1.36
SPG11-209ENST00000558253 KCNS1Q96KK3 526 aa6.55□□□□□ -1.36
SPG11-209ENST00000558253 GNB4Q9HAV0 340 aa6.55□□□□□ -1.36
SPG11-209ENST00000558253 CELSR3Q9NYQ7 3312 aa6.55□□□□□ -1.36
SPG11-209ENST00000558253 DMXL1Q9Y485 3027 aa6.55□□□□□ -1.36
SPG11-209ENST00000558253 MUC6Q6W4X9 2439 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 A0A1W2PRD5 423 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 A0A1W2PRF3 423 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 A0A1W2PRM7 423 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 GRIFINA4D1Z8 144 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 ZNF705FA8MVS1 300 aaPredicted RBP6.54□□□□□ -1.36
SPG11-209ENST00000558253 OVOL3O00110 214 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 NDUFS8O00217 210 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 ZNF324O75467 553 aaPredicted RBP6.54□□□□□ -1.36
SPG11-209ENST00000558253 IL4P05112 153 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 ZNF705DP0CH99 300 aaPredicted RBP6.54□□□□□ -1.36
SPG11-209ENST00000558253 ZNF705BP0CI00 300 aaPredicted RBP6.54□□□□□ -1.36
SPG11-209ENST00000558253 TCL1AP56279 114 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 GNG5P63218 68 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 RIGQ13278 110 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 PSG3Q16557 428 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 Q56UQ5 140 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 MRPL54Q6P161 138 aaKnown RBP6.54□□□□□ -1.36
SPG11-209ENST00000558253 LHFPL4Q7Z7J7 247 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 CIARTQ8N365 385 aaPredicted RBP6.54□□□□□ -1.36
SPG11-209ENST00000558253 NHLRC2Q8NBF2 726 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 BORCS7Q96B45 105 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 CHCHD1Q96BP2 118 aaKnown RBP6.54□□□□□ -1.36
SPG11-209ENST00000558253 ZNF414Q96IQ9 312 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 HSPB9Q9BQS6 159 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 NDFIP1Q9BT67 221 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 VAMP8Q9BV40 100 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 UBTD1Q9HAC8 227 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 CLEC5AQ9NY25 188 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 RABAC1Q9UI14 185 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 TP53TG3Q9ULZ0 132 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 LOC400499M0QZD8 3231 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 CEP250Q9BV73 2442 aa6.54□□□□□ -1.36
SPG11-209ENST00000558253 DSPP15924 2871 aaKnown RBP6.53□□□□□ -1.36
SPG11-209ENST00000558253 APC2O95996 2303 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 ACACAQ13085 2346 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 A0A1W2PS18 150 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 DIRC3C9JPN6 131 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 MRPS12O15235 138 aaKnown RBP6.53□□□□□ -1.36
SPG11-209ENST00000558253 BRI3O95415 125 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 PPBPP02775 128 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 NPSP0C0P6 89 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 OR5AL1P0C617 328 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 APELAP0DMC3 54 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 CT45A10P0DMU9 189 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 ZFP36P26651 326 aaKnown RBP6.53□□□□□ -1.36
SPG11-209ENST00000558253 SRIP30626 198 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 LMO4P61968 165 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 SRSF2Q01130 221 aaKnown RBP6.53□□□□□ -1.36
SPG11-209ENST00000558253 PMCHL1Q16048 86 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 ASPHD1Q5U4P2 390 aa6.53□□□□□ -1.36
SPG11-209ENST00000558253 RUSC1-AS1Q66K80 236 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms