RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 TMBIM6P55061 237 aa11.23□□□□□ -0.61
SCFD1-224ENST00000557713 BPIFCQ8NFQ6 507 aa11.23□□□□□ -0.61
SCFD1-224ENST00000557713 RAB2BQ8WUD1 216 aa11.23□□□□□ -0.61
SCFD1-224ENST00000557713 GPR82Q96P67 336 aa11.23□□□□□ -0.61
SCFD1-224ENST00000557713 CIB3Q96Q77 187 aaPredicted RBP11.23□□□□□ -0.61
SCFD1-224ENST00000557713 SLIRPQ9GZT3 109 aaKnown RBP11.23□□□□□ -0.61
SCFD1-224ENST00000557713 M0R2Z0 102 aa11.22□□□□□ -0.61
SCFD1-224ENST00000557713 DUSP14O95147 198 aaKnown RBP11.22□□□□□ -0.61
SCFD1-224ENST00000557713 RPP30P78346 268 aaKnown RBP11.22□□□□□ -0.61
SCFD1-224ENST00000557713 SPINK13Q1W4C9 94 aa11.22□□□□□ -0.61
SCFD1-224ENST00000557713 IGFL4Q6B9Z1 124 aa11.22□□□□□ -0.61
SCFD1-224ENST00000557713 TMED4Q7Z7H5 227 aa11.22□□□□□ -0.61
SCFD1-224ENST00000557713 MUC4Q99102 2169 aa11.22□□□□□ -0.61
SCFD1-224ENST00000557713 BCL7BQ9BQE9 202 aa11.22□□□□□ -0.61
SCFD1-224ENST00000557713 TMED3Q9Y3Q3 217 aa11.22□□□□□ -0.61
SCFD1-224ENST00000557713 HSPG2P98160 4391 aa11.21□□□□□ -0.61
SCFD1-224ENST00000557713 WRBO00258 174 aa11.21□□□□□ -0.61
SCFD1-224ENST00000557713 INSP01308 110 aa11.21□□□□□ -0.61
SCFD1-224ENST00000557713 TSPOP30536 169 aa11.21□□□□□ -0.61
SCFD1-224ENST00000557713 B2MP61769 119 aa11.21□□□□□ -0.61
SCFD1-224ENST00000557713 RNF182Q8N6D2 247 aa11.21□□□□□ -0.61
SCFD1-224ENST00000557713 TMEM147Q9BVK8 224 aa11.21□□□□□ -0.61
SCFD1-224ENST00000557713 PLAC8L1A1L4L8 177 aa11.2□□□□□ -0.62
SCFD1-224ENST00000557713 AZU1P20160 251 aa11.2□□□□□ -0.62
SCFD1-224ENST00000557713 VAMP1P23763 118 aa11.2□□□□□ -0.62
SCFD1-224ENST00000557713 FAUP35544 74 aaKnown RBP11.2□□□□□ -0.62
SCFD1-224ENST00000557713 ZNRF2Q8NHG8 242 aa11.2□□□□□ -0.62
SCFD1-224ENST00000557713 TRIM63Q969Q1 353 aa11.2□□□□□ -0.62
SCFD1-224ENST00000557713 H3BRN7 92 aa11.19□□□□□ -0.62
SCFD1-224ENST00000557713 SFT2D2O95562 160 aa11.19□□□□□ -0.62
SCFD1-224ENST00000557713 DEFB130BP0DP73 79 aa11.19□□□□□ -0.62
SCFD1-224ENST00000557713 DEFB130AP0DP74 79 aa11.19□□□□□ -0.62
SCFD1-224ENST00000557713 S100A7P31151 101 aa11.19□□□□□ -0.62
SCFD1-224ENST00000557713 TNP2Q05952 138 aa11.19□□□□□ -0.62
SCFD1-224ENST00000557713 SPANXN5Q5MJ07 72 aa11.19□□□□□ -0.62
SCFD1-224ENST00000557713 TMEM144Q7Z5S9 345 aa11.19□□□□□ -0.62
SCFD1-224ENST00000557713 BAP18Q8IXM2 172 aa11.19□□□□□ -0.62
SCFD1-224ENST00000557713 SLC25A21Q9BQT8 299 aaPredicted RBP11.19□□□□□ -0.62
SCFD1-224ENST00000557713 ATG101Q9BSB4 218 aa11.19□□□□□ -0.62
SCFD1-224ENST00000557713 SLC25A39Q9BZJ4 359 aaPredicted RBP11.19□□□□□ -0.62
SCFD1-224ENST00000557713 TRAV12-2A0A075B6T6 113 aa11.18□□□□□ -0.62
SCFD1-224ENST00000557713 NBDYA0A0U1RRE5 68 aa11.18□□□□□ -0.62
SCFD1-224ENST00000557713 HOXB5P09067 269 aa11.18□□□□□ -0.62
SCFD1-224ENST00000557713 ID3Q02535 119 aa11.18□□□□□ -0.62
SCFD1-224ENST00000557713 AKR1C1Q04828 323 aa11.18□□□□□ -0.62
SCFD1-224ENST00000557713 FGL1Q08830 312 aa11.18□□□□□ -0.62
SCFD1-224ENST00000557713 PPP1R1AQ13522 171 aa11.18□□□□□ -0.62
SCFD1-224ENST00000557713 FCN2Q15485 313 aa11.18□□□□□ -0.62
SCFD1-224ENST00000557713 ACOT7LQ6ZUV0 252 aa11.18□□□□□ -0.62
SCFD1-224ENST00000557713 TOMM5Q8N4H5 51 aa11.18□□□□□ -0.62
SCFD1-224ENST00000557713 MCFD2Q8NI22 146 aa11.18□□□□□ -0.62
SCFD1-224ENST00000557713 SHANK2-AS3Q9BTD1 123 aa11.18□□□□□ -0.62
SCFD1-224ENST00000557713 STRAPQ9Y3F4 350 aaKnown RBP11.18□□□□□ -0.62
SCFD1-224ENST00000557713 LRP1BQ9NZR2 4599 aa11.17□□□□□ -0.62
SCFD1-224ENST00000557713 CBY3A6NI87 242 aa11.17□□□□□ -0.62
SCFD1-224ENST00000557713 F5H768 121 aa11.17□□□□□ -0.62
SCFD1-224ENST00000557713 H3BMQ9 156 aa11.17□□□□□ -0.62
SCFD1-224ENST00000557713 H3BP45 60 aa11.17□□□□□ -0.62
SCFD1-224ENST00000557713 BOLA2-SMG1P6H3BVE0 249 aa11.17□□□□□ -0.62
SCFD1-224ENST00000557713 AP3S2P59780 193 aa11.17□□□□□ -0.62
SCFD1-224ENST00000557713 PLP1P60201 277 aa11.17□□□□□ -0.62
SCFD1-224ENST00000557713 CYP2G1PQ6ZSU1 146 aa11.17□□□□□ -0.62
SCFD1-224ENST00000557713 ZNF738Q8NE65 137 aa11.17□□□□□ -0.62
SCFD1-224ENST00000557713 PMS2P5A8MQ11 134 aa11.16□□□□□ -0.62
SCFD1-224ENST00000557713 NUDT3O95989 172 aa11.16□□□□□ -0.62
SCFD1-224ENST00000557713 IL5P05113 134 aa11.16□□□□□ -0.62
SCFD1-224ENST00000557713 ATP5G1P05496 136 aa11.16□□□□□ -0.62
SCFD1-224ENST00000557713 RPL7P18124 248 aaKnown RBP11.16□□□□□ -0.62
SCFD1-224ENST00000557713 CXCL3P19876 107 aa11.16□□□□□ -0.62
SCFD1-224ENST00000557713 ATP5G3P48201 142 aa11.16□□□□□ -0.62
SCFD1-224ENST00000557713 PSG3Q16557 428 aa11.16□□□□□ -0.62
SCFD1-224ENST00000557713 PYDC2Q56P42 97 aa11.16□□□□□ -0.62
SCFD1-224ENST00000557713 C6orf223Q8N319 242 aa11.16□□□□□ -0.62
SCFD1-224ENST00000557713 OR8A1Q8NGG7 326 aa11.16□□□□□ -0.62
SCFD1-224ENST00000557713 LINC01587Q99440 93 aa11.16□□□□□ -0.62
SCFD1-224ENST00000557713 HIGD1AQ9Y241 93 aa11.16□□□□□ -0.62
SCFD1-224ENST00000557713 V9GYH0 126 aa11.16□□□□□ -0.62
SCFD1-224ENST00000557713 A0A087X0K7 114 aa11.15□□□□□ -0.62
SCFD1-224ENST00000557713 HYPMO75409 117 aa11.15□□□□□ -0.62
SCFD1-224ENST00000557713 TAS2R60P59551 318 aa11.15□□□□□ -0.62
SCFD1-224ENST00000557713 RAP2BP61225 183 aa11.15□□□□□ -0.62
SCFD1-224ENST00000557713 HIST1H1AQ02539 215 aaPredicted RBP11.15□□□□□ -0.62
SCFD1-224ENST00000557713 TMEM256Q8N2U0 113 aa11.15□□□□□ -0.62
SCFD1-224ENST00000557713 DEDD2Q8WXF8 326 aa11.15□□□□□ -0.62
SCFD1-224ENST00000557713 LINC00588Q9Y4M8 146 aa11.15□□□□□ -0.62
SCFD1-224ENST00000557713 SMCO3A2RU48 225 aa11.14□□□□□ -0.63
SCFD1-224ENST00000557713 C16orf90A8MZG2 172 aa11.14□□□□□ -0.63
SCFD1-224ENST00000557713 ADAP1O75689 374 aa11.14□□□□□ -0.63
SCFD1-224ENST00000557713 CDK2AP2O75956 126 aa11.14□□□□□ -0.63
SCFD1-224ENST00000557713 CCL18P55774 89 aa11.14□□□□□ -0.63
SCFD1-224ENST00000557713 SELENOTP62341 195 aa11.14□□□□□ -0.63
SCFD1-224ENST00000557713 POLR2GP62487 172 aaKnown RBP eCLIP11.14□□□□□ -0.63
SCFD1-224ENST00000557713 RHOBP62745 196 aa11.14□□□□□ -0.63
SCFD1-224ENST00000557713 UHRF2Q96PU4 802 aa11.14□□□□□ -0.63
SCFD1-224ENST00000557713 PSENENQ9NZ42 101 aa11.14□□□□□ -0.63
SCFD1-224ENST00000557713 MRPS12O15235 138 aaKnown RBP11.13□□□□□ -0.63
SCFD1-224ENST00000557713 OR5G3P0C626 314 aa11.13□□□□□ -0.63
SCFD1-224ENST00000557713 LINC00869P0C866 280 aa11.13□□□□□ -0.63
SCFD1-224ENST00000557713 UBE2MP61081 183 aaKnown RBP11.13□□□□□ -0.63
SCFD1-224ENST00000557713 PATE2Q6UY27 113 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms