RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 EIF3IQ13347 325 aaKnown RBP0.98□□□□□ -2.25
GPHN-216ENST00000557678 TPRXLQ17RH7 258 aa0.98□□□□□ -2.25
GPHN-216ENST00000557678 PHF5AQ7RTV0 110 aaKnown RBP0.98□□□□□ -2.25
GPHN-216ENST00000557678 RNASE11Q8TAA1 199 aaKnown RBP0.98□□□□□ -2.25
GPHN-216ENST00000557678 C4orf3Q8WVX3 66 aa0.98□□□□□ -2.25
GPHN-216ENST00000557678 LY96Q9Y6Y9 160 aa0.98□□□□□ -2.25
GPHN-216ENST00000557678 CUL9Q8IWT3 2517 aa0.98□□□□□ -2.25
GPHN-216ENST00000557678 ARAP1Q96P48 1450 aa0.98□□□□□ -2.25
GPHN-216ENST00000557678 BCL9O00512 1426 aa0.98□□□□□ -2.25
GPHN-216ENST00000557678 KDM6AO15550 1401 aaPredicted RBP0.98□□□□□ -2.25
GPHN-216ENST00000557678 FN1P02751 2386 aaKnown RBP0.97□□□□□ -2.25
GPHN-216ENST00000557678 XIRP1Q702N8 1843 aaKnown RBP0.97□□□□□ -2.25
GPHN-216ENST00000557678 TRAV14DV4A0A0A6YYC5 116 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 TRAV1-1A0A0B4J248 108 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 J3KT08 172 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 KPNA4O00629 521 aaPredicted RBP0.97□□□□□ -2.25
GPHN-216ENST00000557678 LYRM1O43325 122 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 DHFRP00374 187 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 CRPP02741 224 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 DBIP07108 87 aaKnown RBP0.97□□□□□ -2.25
GPHN-216ENST00000557678 S100A11P31949 105 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 SRP9P49458 86 aaKnown RBP0.97□□□□□ -2.25
GPHN-216ENST00000557678 TMBIM6P55061 237 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 ARPC4P59998 168 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 RPS28P62857 69 aaKnown RBP0.97□□□□□ -2.25
GPHN-216ENST00000557678 HBBP68871 147 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 CCDC153Q494R4 210 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 SOSTDC1Q6X4U4 206 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 TMEM254Q8TBM7 123 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 SPACA4Q8TDM5 124 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 CCDC115Q96NT0 180 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 LXNQ9BS40 222 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 CACYBPQ9HB71 228 aaKnown RBP0.97□□□□□ -2.25
GPHN-216ENST00000557678 RASL12Q9NYN1 266 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 MED31Q9Y3C7 131 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 SOX21Q9Y651 276 aaPredicted RBP0.97□□□□□ -2.25
GPHN-216ENST00000557678 ADGRB3O60242 1522 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 PCDH15Q96QU1 1955 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 CEP152O94986 1710 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 RP1P56715 2156 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 TNS3Q68CZ2 1445 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 KIAA1107Q9UPP5 1409 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 MED12LQ86YW9 2145 aa0.97□□□□□ -2.25
GPHN-216ENST00000557678 RTL9Q8NET4 1388 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 COL11A1P12107 1806 aaPredicted RBP0.96□□□□□ -2.26
GPHN-216ENST00000557678 ZFHX2Q9C0A1 2572 aaPredicted RBP0.96□□□□□ -2.26
GPHN-216ENST00000557678 TRAV12-1A0A0B4J245 112 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 IGHV1-58A0A0C4DH39 117 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 TRBV7-6A0A0J9YX20 115 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 A0A1B0GX51 115 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 GABARAPH6UMI1 98 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 RER1O15258 196 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 OR1I1O60431 355 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 CXCL1P09341 107 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 BRS3P32247 399 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 SDC2P34741 201 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 RAB5CP51148 216 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 ARPP19P56211 112 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 S100A12P80511 92 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 PSG9Q00887 426 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 KLRD1Q13241 179 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 HES1Q14469 280 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 ZNF846Q147U1 533 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 SMCO1Q147U7 214 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 Q1T7F1 81 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 C2orf82Q6UX34 121 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 C4orf22Q6V702 233 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 COA5Q86WW8 74 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 LINC00311Q8N616 119 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 C3orf56Q8N813 242 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 C9orf163Q8N9P6 203 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 ST6GALNAC3Q8NDV1 305 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 OR4B1Q8NGF8 309 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 SFT2D1Q8WV19 159 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 LZICQ8WZA0 190 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 NAT8BQ9UHF3 227 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 A2MP01023 1474 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 GBF1Q92538 1859 aa0.96□□□□□ -2.26
GPHN-216ENST00000557678 ARHGEF11O15085 1522 aa0.95□□□□□ -2.26
GPHN-216ENST00000557678 HEATR5BQ9P2D3 2071 aa0.95□□□□□ -2.26
GPHN-216ENST00000557678 FER1L6Q2WGJ9 1857 aa0.95□□□□□ -2.26
GPHN-216ENST00000557678 ZCCHC6Q5VYS8 1495 aaKnown RBP0.95□□□□□ -2.26
GPHN-216ENST00000557678 TRGV2A0A075B6R0 118 aa0.95□□□□□ -2.26
GPHN-216ENST00000557678 TRAV36DV7A0A075B6V5 113 aa0.95□□□□□ -2.26
GPHN-216ENST00000557678 LOC105371267A0A1B0GV96 52 aa0.95□□□□□ -2.26
GPHN-216ENST00000557678 OVOL1O14753 267 aa0.95□□□□□ -2.26
GPHN-216ENST00000557678 DEGS1O15121 323 aa0.95□□□□□ -2.26
GPHN-216ENST00000557678 LYZL6O75951 148 aa0.95□□□□□ -2.26
GPHN-216ENST00000557678 FABP2P12104 132 aa0.95□□□□□ -2.26
GPHN-216ENST00000557678 SSR2P43308 183 aa0.95□□□□□ -2.26
GPHN-216ENST00000557678 LSM3P62310 102 aaKnown RBP0.95□□□□□ -2.26
GPHN-216ENST00000557678 DEFB103AP81534 67 aa0.95□□□□□ -2.26
GPHN-216ENST00000557678 MRPS36P82909 103 aaKnown RBP0.95□□□□□ -2.26
GPHN-216ENST00000557678 PDE6HQ13956 83 aa0.95□□□□□ -2.26
GPHN-216ENST00000557678 MSMO1Q15800 293 aa0.95□□□□□ -2.26
GPHN-216ENST00000557678 RNASE10Q5GAN6 216 aaKnown RBP0.95□□□□□ -2.26
GPHN-216ENST00000557678 PATE2Q6UY27 113 aa0.95□□□□□ -2.26
GPHN-216ENST00000557678 FP248Q71RG6 208 aaPredicted RBP0.95□□□□□ -2.26
GPHN-216ENST00000557678 OR8I2Q8N0Y5 310 aa0.95□□□□□ -2.26
GPHN-216ENST00000557678 OR5D14Q8NGL3 314 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms