RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 LINC00052Q96N35 136 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 RNF2Q99496 336 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 SRRQ9GZT4 340 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 ACOT13Q9NPJ3 140 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 SCN3BQ9NY72 215 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 OR2W1Q9Y3N9 320 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 PKD1P98161 4303 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 DNAH11Q96DT5 4516 aa4.24□□□□□ -1.73
VPS33B-207ENST00000557470 IGKV3-7A0A075B6H7 116 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 IGHV3-49A0A0A0MS15 119 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 IGHV3-21A0A0B4J1V1 117 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 TRAV10A0A0B4J240 114 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 TRAV3A0A0B4J244 114 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 IGHV4-28A0A0C4DH34 117 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 C15orf61A6NNL5 157 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 K7EMT4 169 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 M0R2N4 97 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 PDCD5O14737 125 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 HLA-DQB1P01920 261 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 RBMY1A1P0DJD3 496 aaKnown RBP4.23□□□□□ -1.73
VPS33B-207ENST00000557470 RBMY1CP0DJD4 496 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 HLA-DMBP28068 263 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 RRAS2P62070 204 aaPredicted RBP4.23□□□□□ -1.73
VPS33B-207ENST00000557470 RPS25P62851 125 aaKnown RBP4.23□□□□□ -1.73
VPS33B-207ENST00000557470 RBX1P62877 108 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 TMEM187Q14656 261 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 RBMY1FQ15415 496 aaKnown RBP4.23□□□□□ -1.73
VPS33B-207ENST00000557470 SSX1Q16384 188 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 GUK1Q16774 197 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 LPCAT3Q6P1A2 487 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 SPSB3Q6PJ21 355 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 TMEM91Q6ZNR0 172 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 Q6ZS49 121 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 POM121L12Q8N7R1 296 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 OR10W1Q8NGF6 305 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 TERB2Q8NHR7 220 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 VN1R17PQ8TDU5 208 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 SMIM12Q96EX1 92 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 ZNF414Q96IQ9 312 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 HSD17B10Q99714 261 aaKnown RBP4.23□□□□□ -1.73
VPS33B-207ENST00000557470 PRRT1Q99946 306 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 SLIRPQ9GZT3 109 aaKnown RBP4.23□□□□□ -1.73
VPS33B-207ENST00000557470 NAA50Q9GZZ1 169 aaKnown RBP4.23□□□□□ -1.73
VPS33B-207ENST00000557470 DCSTAMPQ9H295 470 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 HRASLSQ9HDD0 168 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 BET1LQ9NYM9 111 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 TAS2R8Q9NYW2 309 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 THYN1Q9P016 225 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 SMPXQ9UHP9 88 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 RAB22AQ9UL26 194 aa4.23□□□□□ -1.73
VPS33B-207ENST00000557470 DYNC1H1Q14204 4646 aaKnown RBP4.22□□□□□ -1.73
VPS33B-207ENST00000557470 IGHV7-4-1A0A0J9YVY3 117 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 TMEM218A2RU14 115 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 K7EP13 123 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 CCSO14618 274 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 TNFSF12O43508 249 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 HRASP01112 189 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 APOC3P02656 99 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 AMBPP02760 352 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 GIG44P09565 113 aaPredicted RBP4.22□□□□□ -1.73
VPS33B-207ENST00000557470 ZNF25P17030 456 aaPredicted RBP4.22□□□□□ -1.73
VPS33B-207ENST00000557470 GADD45AP24522 165 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 RPL13AP40429 203 aaKnown RBP4.22□□□□□ -1.73
VPS33B-207ENST00000557470 P2RY1P47900 373 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 EIF5AP63241 154 aaKnown RBP4.22□□□□□ -1.73
VPS33B-207ENST00000557470 WT1-ASQ06250 92 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 TRAM1Q15629 374 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 LEMD1Q68G75 181 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 PVRIGQ6DKI7 326 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 ZNF66Q6ZN08 573 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 NR2C2APQ86WQ0 139 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 UBAC2Q8NBM4 344 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 RNF126Q9BV68 326 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 RHPN1-AS1Q9BWJ2 59 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 QTRT1Q9BXR0 403 aaKnown RBP4.22□□□□□ -1.73
VPS33B-207ENST00000557470 COMMD5Q9GZQ3 224 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 CLEC5AQ9NY25 188 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 C21orf62Q9NYP8 219 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 NAGKQ9UJ70 344 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 V9GY05 133 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 HERC1Q15751 4861 aa4.22□□□□□ -1.73
VPS33B-207ENST00000557470 IGHV3OR16-13A0A075B7E8 117 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 IGHV3-74A0A0B4J1X5 117 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 TEX13DA0A0J9YY54 714 aaPredicted RBP4.21□□□□□ -1.74
VPS33B-207ENST00000557470 A0A1B0GV72 72 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 FAM74A7A6NL05 159 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 K7EIM0 57 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 M0R143 59 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 UPK2O00526 184 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 ARL6IP5O75915 188 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 CTSGP08311 255 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 P0DMU3 169 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 FAM231AP0DMU4 169 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 FAM231CP0DMU5 169 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 OR13C7P0DN81 318 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 SCGB1A1P11684 91 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 CMC4P56277 68 aaPredicted RBP4.21□□□□□ -1.74
VPS33B-207ENST00000557470 OR10A3P58181 314 aa4.21□□□□□ -1.74
VPS33B-207ENST00000557470 UBE2G2P60604 165 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms