RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 MPTX1A8MV57 137 aa6.83□□□□□ -1.32
CHD8-213ENST00000557364 IGKV1-13P0DP09 117 aa6.83□□□□□ -1.32
CHD8-213ENST00000557364 TRAV1-1A0A0B4J248 108 aa6.83□□□□□ -1.32
CHD8-213ENST00000557364 SRP19P09132 144 aaKnown RBP6.83□□□□□ -1.32
CHD8-213ENST00000557364 CFHR2P36980 270 aa6.83□□□□□ -1.32
CHD8-213ENST00000557364 KIF26AQ9ULI4 1882 aaPredicted RBP6.83□□□□□ -1.32
CHD8-213ENST00000557364 CARHSP1Q9Y2V2 147 aaKnown RBP6.83□□□□□ -1.32
CHD8-213ENST00000557364 CHTOPQ9Y3Y2 248 aaKnown RBP6.83□□□□□ -1.32
CHD8-213ENST00000557364 IGHV3OR16-8A0A075B7F1 116 aa6.83□□□□□ -1.32
CHD8-213ENST00000557364 LINC00311Q8N616 119 aa6.83□□□□□ -1.32
CHD8-213ENST00000557364 A8MWV9 139 aa6.83□□□□□ -1.32
CHD8-213ENST00000557364 FBLN7Q53RD9 439 aa6.83□□□□□ -1.32
CHD8-213ENST00000557364 YPEL3P61236 119 aaPredicted RBP6.82□□□□□ -1.32
CHD8-213ENST00000557364 MBD3L1Q8WWY6 194 aa6.82□□□□□ -1.32
CHD8-213ENST00000557364 MS4A6AQ9H2W1 248 aa6.82□□□□□ -1.32
CHD8-213ENST00000557364 PSG3Q16557 428 aa6.82□□□□□ -1.32
CHD8-213ENST00000557364 PUSL1Q8N0Z8 303 aaKnown RBP6.82□□□□□ -1.32
CHD8-213ENST00000557364 PARD6GQ9BYG4 376 aaPredicted RBP6.82□□□□□ -1.32
CHD8-213ENST00000557364 LINC00158P58513 81 aa6.82□□□□□ -1.32
CHD8-213ENST00000557364 KLRD1Q13241 179 aa6.82□□□□□ -1.32
CHD8-213ENST00000557364 IL17DQ8TAD2 202 aa6.82□□□□□ -1.32
CHD8-213ENST00000557364 CLDN16Q9Y5I7 305 aa6.82□□□□□ -1.32
CHD8-213ENST00000557364 COL8A2P25067 703 aa6.82□□□□□ -1.32
CHD8-213ENST00000557364 FOXA3P55318 350 aaPredicted RBP6.82□□□□□ -1.32
CHD8-213ENST00000557364 EFNB1P98172 346 aa6.82□□□□□ -1.32
CHD8-213ENST00000557364 KIAA1644Q3SXP7 199 aa6.82□□□□□ -1.32
CHD8-213ENST00000557364 PMS2P5A8MQ11 134 aa6.82□□□□□ -1.32
CHD8-213ENST00000557364 NDUFA4O00483 81 aa6.82□□□□□ -1.32
CHD8-213ENST00000557364 TNFRSF6BO95407 300 aa6.82□□□□□ -1.32
CHD8-213ENST00000557364 MST1LQ2TV78 715 aa6.82□□□□□ -1.32
CHD8-213ENST00000557364 NMSQ5H8A3 153 aa6.82□□□□□ -1.32
CHD8-213ENST00000557364 ETV2O00321 342 aaPredicted RBP6.82□□□□□ -1.32
CHD8-213ENST00000557364 TREML4Q6UXN2 200 aa6.82□□□□□ -1.32
CHD8-213ENST00000557364 SH2D6Q7Z4S9 175 aa6.82□□□□□ -1.32
CHD8-213ENST00000557364 DNAJC30Q96LL9 226 aa6.82□□□□□ -1.32
CHD8-213ENST00000557364 EML6Q6ZMW3 1958 aa6.82□□□□□ -1.32
CHD8-213ENST00000557364 MRPL27Q9P0M9 148 aaKnown RBP6.82□□□□□ -1.32
CHD8-213ENST00000557364 NDUFA3O95167 84 aa6.81□□□□□ -1.32
CHD8-213ENST00000557364 C6orf226Q5I0X4 101 aa6.81□□□□□ -1.32
CHD8-213ENST00000557364 TMEM242Q9NWH2 141 aa6.81□□□□□ -1.32
CHD8-213ENST00000557364 LINC00614P0C842 121 aa6.81□□□□□ -1.32
CHD8-213ENST00000557364 Q6P435 159 aa6.81□□□□□ -1.32
CHD8-213ENST00000557364 TRPT1Q86TN4 253 aaKnown RBP6.81□□□□□ -1.32
CHD8-213ENST00000557364 C1QTNF9P0C862 333 aa6.81□□□□□ -1.32
CHD8-213ENST00000557364 FGFBP3Q8TAT2 258 aa6.81□□□□□ -1.32
CHD8-213ENST00000557364 KAAG1Q9UBP8 84 aa6.81□□□□□ -1.32
CHD8-213ENST00000557364 ZNF561-AS1K7EIQ3 104 aa6.81□□□□□ -1.32
CHD8-213ENST00000557364 FCN3O75636 299 aa6.81□□□□□ -1.32
CHD8-213ENST00000557364 ATP5G3P48201 142 aa6.81□□□□□ -1.32
CHD8-213ENST00000557364 PAX2Q02962 417 aa6.81□□□□□ -1.32
CHD8-213ENST00000557364 C1QL4Q86Z23 238 aa6.81□□□□□ -1.32
CHD8-213ENST00000557364 PAQR4Q8N4S7 273 aaPredicted RBP6.81□□□□□ -1.32
CHD8-213ENST00000557364 GGTLC1Q9BX51 225 aa6.81□□□□□ -1.32
CHD8-213ENST00000557364 TTC28Q96AY4 2481 aa6.81□□□□□ -1.32
CHD8-213ENST00000557364 IGKV1D-17A0A075B6S4 117 aa6.81□□□□□ -1.32
CHD8-213ENST00000557364 LMO1P25800 156 aa6.81□□□□□ -1.32
CHD8-213ENST00000557364 TEX36Q5VZQ5 186 aa6.81□□□□□ -1.32
CHD8-213ENST00000557364 EFNA2O43921 213 aa6.8□□□□□ -1.32
CHD8-213ENST00000557364 CLPSP04118 112 aa6.8□□□□□ -1.32
CHD8-213ENST00000557364 PNRC2Q9NPJ4 139 aaKnown RBP6.8□□□□□ -1.32
CHD8-213ENST00000557364 ZNF876PQ49A33 203 aa6.8□□□□□ -1.32
CHD8-213ENST00000557364 TMEM131Q92545 1883 aa6.8□□□□□ -1.32
CHD8-213ENST00000557364 IGKCP01834 107 aa6.8□□□□□ -1.32
CHD8-213ENST00000557364 GATA2P23769 480 aaPredicted RBP6.8□□□□□ -1.32
CHD8-213ENST00000557364 SYNJ2BPP57105 145 aa6.8□□□□□ -1.32
CHD8-213ENST00000557364 RPL15P61313 204 aaKnown RBP6.8□□□□□ -1.32
CHD8-213ENST00000557364 DEFB113Q30KQ7 82 aa6.8□□□□□ -1.32
CHD8-213ENST00000557364 C9orf66Q5T8R8 295 aa6.8□□□□□ -1.32
CHD8-213ENST00000557364 RNF152Q8N8N0 203 aa6.8□□□□□ -1.32
CHD8-213ENST00000557364 TRBV25-1A0A075B6N4 114 aa6.8□□□□□ -1.32
CHD8-213ENST00000557364 MYMXA0A1B0GTQ4 84 aa6.8□□□□□ -1.32
CHD8-213ENST00000557364 NPIPB5A8MRT5 1133 aa6.8□□□□□ -1.32
CHD8-213ENST00000557364 LEPROTO15243 131 aa6.8□□□□□ -1.32
CHD8-213ENST00000557364 C8orf31Q8N9H6 132 aa6.8□□□□□ -1.32
CHD8-213ENST00000557364 VPREB3Q9UKI3 123 aa6.8□□□□□ -1.32
CHD8-213ENST00000557364 ATXN8Q156A1 80 aa6.8□□□□□ -1.32
CHD8-213ENST00000557364 GFRA4Q9GZZ7 299 aa6.8□□□□□ -1.32
CHD8-213ENST00000557364 TRAV12-3A0A0B4J271 114 aa6.8□□□□□ -1.32
CHD8-213ENST00000557364 TMEM256Q8N2U0 113 aa6.8□□□□□ -1.32
CHD8-213ENST00000557364 BDP1A6H8Y1 2624 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 M0R2P5 195 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 LHFPL1Q86WI0 220 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 ATP6V0BQ99437 205 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 A0A1B0GW64 132 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 F5H768 121 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 TCRAP04437 139 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 HGFACQ04756 655 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 TMEM14EPQ6UXP3 125 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 PRSS33Q8NF86 280 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 SLC17A3O00476 420 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 PYYP10082 97 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 HOXD3P31249 432 aaPredicted RBP6.79□□□□□ -1.32
CHD8-213ENST00000557364 RPL23P62829 140 aaKnown RBP6.79□□□□□ -1.32
CHD8-213ENST00000557364 DLX4Q92988 240 aaPredicted RBP6.79□□□□□ -1.32
CHD8-213ENST00000557364 NOTCH4Q99466 2003 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 PLXNB3Q9ULL4 1909 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 PGPEP1LA6NFU8 196 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 GNG5P63218 68 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 ARL6IP6Q8N6S5 226 aa6.79□□□□□ -1.32
CHD8-213ENST00000557364 SPXQ9BT56 116 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms