RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 COL8A2P25067 703 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 GPR6P46095 362 aaPredicted RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 LGALS7P47929 136 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 PRRX1P54821 245 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 UBA52P62987 128 aaKnown RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 EIF5AP63241 154 aaKnown RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 IFITM2Q01629 132 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 ZNF816Q0VGE8 651 aaPredicted RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 GNMTQ14749 295 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 SMCO1Q147U7 214 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 SLC9A3R2Q15599 337 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 RTL8BQ17RB0 113 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 HLA-DRB5Q30154 266 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 LGALSLQ3ZCW2 172 aaPredicted RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 LINC00483Q53H64 154 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 FAM201AQ5SY85 155 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 MINOS1Q5TGZ0 78 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 THOC7Q6I9Y2 204 aaKnown RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 DUX4L9Q6RFH8 374 aaPredicted RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 TEX261Q6UWH6 196 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 LYPD2Q6UXB3 125 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 LYZL2Q7Z4W2 148 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 ZNF546Q86UE3 836 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 ZNF695Q8IW36 515 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 ZCCHC24Q8N2G6 241 aaKnown RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 C6orf223Q8N319 242 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 UBAC2Q8NBM4 344 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 INO80EQ8NBZ0 244 aaPredicted RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 OR4C13Q8NGP0 309 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 OR13D1Q8NGV5 346 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 OR5B3Q8NH48 314 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 OR51H1Q8NH63 302 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 VSTM2AQ8TAG5 236 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 LRRC20Q8TCA0 184 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 C10orf105Q8TEF2 133 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 ARPC1AQ92747 370 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 SMIM8Q96KF7 97 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 OR10C1Q96KK4 312 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 CIB3Q96Q77 187 aaPredicted RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 CCL19Q99731 98 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 PDCD10Q9BUL8 212 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 BEX2Q9BXY8 128 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 MFFQ9GZY8 342 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 PARP12Q9H0J9 701 aaKnown RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 ARV1Q9H2C2 271 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 BEX1Q9HBH7 125 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 LYRM2Q9NU23 88 aaPredicted RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 TMEM14BQ9NUH8 114 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 MED9Q9NWA0 146 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 FKBP11Q9NYL4 201 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 BET1LQ9NYM9 111 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 DUX4Q9UBX2 424 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 PAIP2BQ9ULR5 123 aaKnown RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 RCL1Q9Y2P8 373 aaKnown RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 TBL2Q9Y4P3 447 aaKnown RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 HSPB11Q9Y547 144 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 RBM7Q9Y580 266 aaKnown RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 MINOS1-NBL1R4GNA1 71 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 U3KQ87 197 aa2.08□□□□□ -2.08
VRK1-207ENST00000557352 NSD1Q96L73 2696 aaPredicted RBP2.08□□□□□ -2.08
VRK1-207ENST00000557352 NBPF19A0A087WUL8 3843 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 WNK1Q9H4A3 2382 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 TRAV26-1A0A087WT03 109 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 FXYD6-FXYD2A0A087WZ82 144 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 A0A096LNT2 108 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 TRAV39A0A0B4J263 110 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 KANTRA0A1W2PQU2 76 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 H0YJW9 148 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 BUB1B-PAK6H3BSN5 160 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 J3QKU1 62 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 L7N2F9 121 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 M0R1X1 148 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 HSD17B6O14756 317 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 SLC31A2O15432 143 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 ARPC5O15511 151 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 SYNGR2O43760 224 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 RAMP3O60896 148 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 S1PR2O95136 353 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 SIX6O95475 246 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 APOA2P02652 100 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 PRB1P04280 392 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 ARG1P05089 322 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 CT45A6P0DMU7 189 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 CT45A5P0DMU8 189 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 CT45A7P0DMV0 189 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 TPT1P13693 172 aaKnown RBP2.07□□□□□ -2.08
VRK1-207ENST00000557352 CCL3L1P16619 93 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 CXCL2P19875 107 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 USF1P22415 310 aaPredicted RBP2.07□□□□□ -2.08
VRK1-207ENST00000557352 MAS1LP35410 378 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 NUP62P37198 522 aaPredicted RBP2.07□□□□□ -2.08
VRK1-207ENST00000557352 CEACAM3P40198 252 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 LPAR6P43657 344 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 RAB5CP51148 216 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 DYNLT3P51808 116 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 UBE2E1P51965 193 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 AKR1C2P52895 323 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 NKX2-5P52952 324 aaPredicted RBP2.07□□□□□ -2.08
VRK1-207ENST00000557352 SPCS3P61009 180 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms