RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 BORCS5Q969J3 196 aa3.11□□□□□ -1.91
SCFD1-223ENST00000557076 CHAC1Q9BUX1 264 aa3.11□□□□□ -1.91
SCFD1-223ENST00000557076 SLC5A7Q9GZV3 580 aa3.11□□□□□ -1.91
SCFD1-223ENST00000557076 RPRMQ9NS64 109 aa3.11□□□□□ -1.91
SCFD1-223ENST00000557076 FAM212BQ9NTI7 297 aaPredicted RBP3.11□□□□□ -1.91
SCFD1-223ENST00000557076 MRPL36Q9P0J6 103 aaKnown RBP3.11□□□□□ -1.91
SCFD1-223ENST00000557076 DOK5Q9P104 306 aa3.11□□□□□ -1.91
SCFD1-223ENST00000557076 ELF5Q9UKW6 265 aaPredicted RBP3.11□□□□□ -1.91
SCFD1-223ENST00000557076 LY96Q9Y6Y9 160 aa3.11□□□□□ -1.91
SCFD1-223ENST00000557076 V9GY05 133 aa3.11□□□□□ -1.91
SCFD1-223ENST00000557076 hDV102S1A0JD36 115 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 F6UB75 175 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 ARL6IP5O75915 188 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 DUSP14O95147 198 aaKnown RBP3.1□□□□□ -1.91
SCFD1-223ENST00000557076 PPYP01298 95 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 INSP01308 110 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 IGLC1P0CG04 106 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 RD3LP0DJH9 198 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 ELK1P19419 428 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 EVI2AP22794 236 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 UCP1P25874 307 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 RPS25P62851 125 aaKnown RBP3.1□□□□□ -1.91
SCFD1-223ENST00000557076 TDRG1Q3Y452 100 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 TIGITQ495A1 244 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 GGNBP1Q5YKI7 109 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 LYPD5Q6UWN5 251 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 DHRS11Q6UWP2 260 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 SCXQ7RTU7 201 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 CMTM1Q8IZ96 169 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 C10orf126Q8N4M7 172 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 TSPAN14Q8NG11 270 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 OR1S2Q8NGQ3 325 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 OR6F1Q8NGZ6 308 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 OR4A16Q8NH70 328 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 COQ8AQ8NI60 647 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 RNASE8Q8TDE3 154 aaKnown RBP3.1□□□□□ -1.91
SCFD1-223ENST00000557076 VSIG2Q96IQ7 327 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 MED4Q9NPJ6 270 aa3.1□□□□□ -1.91
SCFD1-223ENST00000557076 ZNF98A6NK75 572 aa3.09□□□□□ -1.91
SCFD1-223ENST00000557076 M0R2Z0 102 aa3.09□□□□□ -1.91
SCFD1-223ENST00000557076 PSCAO43653 123 aa3.09□□□□□ -1.91
SCFD1-223ENST00000557076 ZNF324O75467 553 aaPredicted RBP3.09□□□□□ -1.91
SCFD1-223ENST00000557076 IGLV2-8P01709 118 aa3.09□□□□□ -1.91
SCFD1-223ENST00000557076 IL4P05112 153 aa3.09□□□□□ -1.91
SCFD1-223ENST00000557076 RNASE2P10153 161 aaKnown RBP3.09□□□□□ -1.91
SCFD1-223ENST00000557076 HTN1P15515 57 aa3.09□□□□□ -1.91
SCFD1-223ENST00000557076 PSMB9P28065 219 aa3.09□□□□□ -1.91
SCFD1-223ENST00000557076 OR10J1P30954 320 aa3.09□□□□□ -1.91
SCFD1-223ENST00000557076 NUP62P37198 522 aaPredicted RBP3.09□□□□□ -1.91
SCFD1-223ENST00000557076 CNN1P51911 297 aaKnown RBP3.09□□□□□ -1.91
SCFD1-223ENST00000557076 SPINK13Q1W4C9 94 aa3.09□□□□□ -1.91
SCFD1-223ENST00000557076 SFXN4Q6P4A7 337 aa3.09□□□□□ -1.91
SCFD1-223ENST00000557076 TMEM91Q6ZNR0 172 aa3.09□□□□□ -1.91
SCFD1-223ENST00000557076 H2BFWTQ7Z2G1 175 aa3.09□□□□□ -1.91
SCFD1-223ENST00000557076 CCDC190Q86UF4 302 aa3.09□□□□□ -1.91
SCFD1-223ENST00000557076 LRTM2Q8N967 370 aa3.09□□□□□ -1.91
SCFD1-223ENST00000557076 BPIFB6Q8NFQ5 453 aa3.09□□□□□ -1.91
SCFD1-223ENST00000557076 OR11H7Q8NGC8 314 aa3.09□□□□□ -1.91
SCFD1-223ENST00000557076 TMEM263Q8WUH6 116 aaKnown RBP3.09□□□□□ -1.91
SCFD1-223ENST00000557076 TMEM203Q969S6 136 aa3.09□□□□□ -1.91
SCFD1-223ENST00000557076 SEC22AQ96IW7 307 aa3.09□□□□□ -1.91
SCFD1-223ENST00000557076 SDF2L1Q9HCN8 221 aa3.09□□□□□ -1.91
SCFD1-223ENST00000557076 TRAV12-2A0A075B6T6 113 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 TRAV5A0A0B4J249 113 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 IFITM5A6NNB3 132 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 H7BYZ3 331 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 MYL12BO14950 172 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 SSX5O60225 188 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 GAGE7O76087 117 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 RLN2P04090 185 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 CRYGDP07320 174 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 GAGE12FP0CL80 117 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 GAGE12GP0CL81 117 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 GAGE12IP0CL82 117 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 SLC25A4P12235 298 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 PTHLHP12272 177 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 OPRK1P41145 380 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 MEOX2P50222 304 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 HNRNPA3P51991 378 aaKnown RBP3.08□□□□□ -1.92
SCFD1-223ENST00000557076 OR10A3P58181 314 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 GNG2P59768 71 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 DAZ2Q13117 558 aaKnown RBP3.08□□□□□ -1.92
SCFD1-223ENST00000557076 SLAQ13239 276 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 GAMTQ14353 236 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 SPHARQ15513 63 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 TRAM1Q15629 374 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 BSXQ3C1V8 233 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 LELP1Q5T871 98 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 HES5Q5TA89 166 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 C1orf146Q5VVC0 180 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 WDR73Q6P4I2 378 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 PRSS54Q6PEW0 395 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 NEGR1Q7Z3B1 354 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 HOGA1Q86XE5 327 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 BEST4Q8NFU0 473 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 CIRBP-AS1Q8TBR5 109 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 GPR146Q96CH1 333 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 LINC00467Q9BRT7 94 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 PAXXQ9BUH6 204 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms