RNA–Protein interactions for RNA: ENST00000557060.1

SYNE2-225, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 3,203 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-225ENST00000557060 TPPP3Q9BW30 176 aa4.65□□□□□ -1.67
SYNE2-225ENST00000557060 CTDSP1Q9GZU7 261 aa4.65□□□□□ -1.67
SYNE2-225ENST00000557060 THYN1Q9P016 225 aa4.65□□□□□ -1.67
SYNE2-225ENST00000557060 JMJD1CQ15652 2540 aa4.65□□□□□ -1.67
SYNE2-225ENST00000557060 AP4M1O00189 453 aa4.65□□□□□ -1.67
SYNE2-225ENST00000557060 SMAD7O15105 426 aaKnown RBP4.65□□□□□ -1.67
SYNE2-225ENST00000557060 FABP4P15090 132 aa4.65□□□□□ -1.67
SYNE2-225ENST00000557060 HIST1H1BP16401 226 aaKnown RBP4.65□□□□□ -1.67
SYNE2-225ENST00000557060 S100A2P29034 98 aa4.65□□□□□ -1.67
SYNE2-225ENST00000557060 PMS2P11Q13670 270 aa4.65□□□□□ -1.67
SYNE2-225ENST00000557060 IBA57Q5T440 356 aaKnown RBP4.65□□□□□ -1.67
SYNE2-225ENST00000557060 IL17RELQ6ZVW7 336 aa4.65□□□□□ -1.67
SYNE2-225ENST00000557060 LINC00528Q8N1L1 170 aa4.65□□□□□ -1.67
SYNE2-225ENST00000557060 ZNF491Q8N8L2 437 aa4.65□□□□□ -1.67
SYNE2-225ENST00000557060 ZNF586Q9NXT0 402 aa4.65□□□□□ -1.67
SYNE2-225ENST00000557060 IGLV11-55A0A075B6I3 123 aa4.64□□□□□ -1.67
SYNE2-225ENST00000557060 A0A1W2PRE2 83 aa4.64□□□□□ -1.67
SYNE2-225ENST00000557060 C5orf52A6NGY3 159 aa4.64□□□□□ -1.67
SYNE2-225ENST00000557060 PPP1R2P9O14990 202 aa4.64□□□□□ -1.67
SYNE2-225ENST00000557060 FOLR2P14207 255 aa4.64□□□□□ -1.67
SYNE2-225ENST00000557060 ANAPC16Q96DE5 110 aa4.64□□□□□ -1.67
SYNE2-225ENST00000557060 TBL2Q9Y4P3 447 aaKnown RBP4.64□□□□□ -1.67
SYNE2-225ENST00000557060 TRAPPC1Q9Y5R8 145 aa4.64□□□□□ -1.67
SYNE2-225ENST00000557060 MUC21A0A0G2JKD1 596 aa4.64□□□□□ -1.67
SYNE2-225ENST00000557060 MUC21A0A140T8X8 626 aa4.64□□□□□ -1.67
SYNE2-225ENST00000557060 GZMBP10144 247 aa4.64□□□□□ -1.67
SYNE2-225ENST00000557060 CAMPP49913 170 aa4.64□□□□□ -1.67
SYNE2-225ENST00000557060 RPL11P62913 178 aaKnown RBP4.64□□□□□ -1.67
SYNE2-225ENST00000557060 PAX8Q06710 450 aa4.64□□□□□ -1.67
SYNE2-225ENST00000557060 MUC21Q5SSG8 566 aa4.64□□□□□ -1.67
SYNE2-225ENST00000557060 CIARTQ8N365 385 aaPredicted RBP4.64□□□□□ -1.67
SYNE2-225ENST00000557060 Q8N6K4 173 aa4.64□□□□□ -1.67
SYNE2-225ENST00000557060 TMEM242Q9NWH2 141 aa4.64□□□□□ -1.67
SYNE2-225ENST00000557060 TMSB15BA0A087X1C1 80 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 XKRY2A2RUG3 117 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 ZNF98A6NK75 572 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 B4DSR2 109 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 CTSGP08311 255 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 PF4V1P10720 104 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 GP9P14770 177 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 HLA-DMBP28068 263 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 ADMP35318 185 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 TPPP2P59282 170 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 BPIFA4PQ86YQ2 179 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 C5orf56Q8N8D9 126 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 OR4F17Q8NGA8 305 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 OR10D4PQ8NGN7 298 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 RNF2Q99496 336 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 EPDR1Q9UM22 224 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 TRBV24-1A0A075B6N3 115 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 ZNF705FA8MVS1 300 aaPredicted RBP4.63□□□□□ -1.67
SYNE2-225ENST00000557060 F8W735 103 aaPredicted RBP4.63□□□□□ -1.67
SYNE2-225ENST00000557060 TRBV12-3P01733 135 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 IGHV4-59P01825 116 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 TRGV3P03979 118 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 S100A9P06702 114 aaKnown RBP4.63□□□□□ -1.67
SYNE2-225ENST00000557060 TMEM249Q2WGJ8 235 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 TXNDC17Q9BRA2 123 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 KLK15Q9H2R5 256 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 OOSP1A8MZH6 123 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 SNURFLB1AK76 121 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 RPEL1Q2QD12 228 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 C10orf99Q6UWK7 81 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 TCF24Q7RTU0 167 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 LINC00518Q8N0U6 118 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 Q8TAT8 98 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 PIFOQ8TCI5 191 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 NIT2Q9NQR4 276 aa4.63□□□□□ -1.67
SYNE2-225ENST00000557060 IGKV2-40A0A087WW87 121 aaPredicted RBP4.62□□□□□ -1.67
SYNE2-225ENST00000557060 TRAV41A0A0B4J266 112 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 NPIPB5A8MRT5 1133 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 J3KRW8 73 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 IGKV2D-40P01614 121 aaPredicted RBP4.62□□□□□ -1.67
SYNE2-225ENST00000557060 HLA-DRB1P01911 266 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 APOHP02749 345 aaPredicted RBP4.62□□□□□ -1.67
SYNE2-225ENST00000557060 FABP1P07148 127 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 CD33P20138 364 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 RPL19P84098 196 aaKnown RBP4.62□□□□□ -1.67
SYNE2-225ENST00000557060 Q5PR19 223 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 CDPF1Q6NVV7 123 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 LINC00322Q6ZN03 302 aaPredicted RBP4.62□□□□□ -1.67
SYNE2-225ENST00000557060 TTC9CQ8N5M4 171 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 RNF182Q8N6D2 247 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 STXBP6Q8NFX7 210 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 OR1L6Q8NGR2 347 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 C11orf52Q96A22 123 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 SPOCK3Q9BQ16 436 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 SSBP4Q9BWG4 385 aaPredicted RBP4.62□□□□□ -1.67
SYNE2-225ENST00000557060 SRD5A3Q9H8P0 318 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 NAT8BQ9UHF3 227 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 HIVEP2P31629 2446 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 IFITM10A6NMD0 228 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 ZNF785A8K8V0 405 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 GGCTO75223 188 aaKnown RBP4.62□□□□□ -1.67
SYNE2-225ENST00000557060 TOMM40O96008 361 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 IGLV2-8P01709 118 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 TCRAP04437 139 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 SRD5A1P18405 259 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 DEFB112Q30KQ8 113 aa4.62□□□□□ -1.67
SYNE2-225ENST00000557060 TOMM20LQ6UXN7 152 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms