RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 LINC00311Q8N616 119 aa12.21□□□□□ -0.45
TMEM55B-207ENST00000557041 JKAMPQ9P055 326 aa12.21□□□□□ -0.45
TMEM55B-207ENST00000557041 TYMSP04818 313 aa12.21□□□□□ -0.46
TMEM55B-207ENST00000557041 MFAP4P55083 255 aa12.21□□□□□ -0.46
TMEM55B-207ENST00000557041 TAS2R60P59551 318 aa12.21□□□□□ -0.46
TMEM55B-207ENST00000557041 C11orf52Q96A22 123 aa12.21□□□□□ -0.46
TMEM55B-207ENST00000557041 NRN1Q9NPD7 142 aa12.21□□□□□ -0.46
TMEM55B-207ENST00000557041 A6NNC1 897 aa12.2□□□□□ -0.46
TMEM55B-207ENST00000557041 LINC00574Q9H8X3 128 aa12.2□□□□□ -0.46
TMEM55B-207ENST00000557041 C21orf62Q9NYP8 219 aa12.2□□□□□ -0.46
TMEM55B-207ENST00000557041 FBXL7Q9UJT9 491 aa12.2□□□□□ -0.46
TMEM55B-207ENST00000557041 C2CD3Q4AC94 2353 aa12.2□□□□□ -0.46
TMEM55B-207ENST00000557041 CLEC5AQ9NY25 188 aa12.2□□□□□ -0.46
TMEM55B-207ENST00000557041 MT-ND6P03923 174 aa12.2□□□□□ -0.46
TMEM55B-207ENST00000557041 LDLRAD2Q5SZI1 272 aa12.2□□□□□ -0.46
TMEM55B-207ENST00000557041 PMCHL2Q9BQD1 86 aa12.2□□□□□ -0.46
TMEM55B-207ENST00000557041 CHRDL1Q9BU40 450 aa12.2□□□□□ -0.46
TMEM55B-207ENST00000557041 IZUMO1RA6ND01 250 aa12.19□□□□□ -0.46
TMEM55B-207ENST00000557041 FNDC10F2Z333 226 aa12.19□□□□□ -0.46
TMEM55B-207ENST00000557041 ORM1P02763 201 aa12.19□□□□□ -0.46
TMEM55B-207ENST00000557041 TCRAP04437 139 aa12.19□□□□□ -0.46
TMEM55B-207ENST00000557041 DLX6P56179 175 aa12.19□□□□□ -0.46
TMEM55B-207ENST00000557041 TMEM183BQ1AE95 376 aa12.19□□□□□ -0.46
TMEM55B-207ENST00000557041 CCDC144NLQ6NUI1 221 aa12.19□□□□□ -0.46
TMEM55B-207ENST00000557041 Q6ZWC4 215 aa12.19□□□□□ -0.46
TMEM55B-207ENST00000557041 C5orf64Q2M2E5 130 aa12.19□□□□□ -0.46
TMEM55B-207ENST00000557041 ZNF841Q6ZN19 808 aa12.19□□□□□ -0.46
TMEM55B-207ENST00000557041 CHODLQ9H9P2 273 aa12.19□□□□□ -0.46
TMEM55B-207ENST00000557041 SCGB2A1O75556 95 aa12.19□□□□□ -0.46
TMEM55B-207ENST00000557041 HLA-DRB1P01911 266 aa12.19□□□□□ -0.46
TMEM55B-207ENST00000557041 PAFAH1B2P68402 229 aa12.19□□□□□ -0.46
TMEM55B-207ENST00000557041 TMEM249Q2WGJ8 235 aa12.19□□□□□ -0.46
TMEM55B-207ENST00000557041 REC114Q7Z4M0 266 aa12.19□□□□□ -0.46
TMEM55B-207ENST00000557041 BCL6BQ8N143 479 aaPredicted RBP12.19□□□□□ -0.46
TMEM55B-207ENST00000557041 Q8TAT8 98 aa12.19□□□□□ -0.46
TMEM55B-207ENST00000557041 TRGV9Q99603 122 aa12.19□□□□□ -0.46
TMEM55B-207ENST00000557041 IGLC1P0CG04 106 aa12.18□□□□□ -0.46
TMEM55B-207ENST00000557041 TNFRSF14Q92956 283 aa12.18□□□□□ -0.46
TMEM55B-207ENST00000557041 CRYBG3Q68DQ2 2970 aa12.18□□□□□ -0.46
TMEM55B-207ENST00000557041 BMPR1BO00238 502 aa12.18□□□□□ -0.46
TMEM55B-207ENST00000557041 FAM106CPP0CH98 169 aa12.18□□□□□ -0.46
TMEM55B-207ENST00000557041 GNB1LQ9BYB4 327 aa12.18□□□□□ -0.46
TMEM55B-207ENST00000557041 RPP21Q9H633 154 aaKnown RBP12.18□□□□□ -0.46
TMEM55B-207ENST00000557041 IGKV2-40A0A087WW87 121 aaPredicted RBP12.17□□□□□ -0.46
TMEM55B-207ENST00000557041 IGKV2D-40P01614 121 aaPredicted RBP12.17□□□□□ -0.46
TMEM55B-207ENST00000557041 CLEC19AQ6UXS0 136 aa12.17□□□□□ -0.46
TMEM55B-207ENST00000557041 TMEM136Q6ZRR5 245 aa12.17□□□□□ -0.46
TMEM55B-207ENST00000557041 GRAMD2BQ96HH9 432 aa12.17□□□□□ -0.46
TMEM55B-207ENST00000557041 G3V318 75 aa12.17□□□□□ -0.46
TMEM55B-207ENST00000557041 PPIFP30405 207 aaKnown RBP12.17□□□□□ -0.46
TMEM55B-207ENST00000557041 BEND2Q8NDZ0 799 aa12.17□□□□□ -0.46
TMEM55B-207ENST00000557041 IGKV1-17P01599 117 aa12.16□□□□□ -0.46
TMEM55B-207ENST00000557041 ZFP36P26651 326 aaKnown RBP12.16□□□□□ -0.46
TMEM55B-207ENST00000557041 FAM120AOSQ5T036 256 aa12.16□□□□□ -0.46
TMEM55B-207ENST00000557041 Q6ZN92 141 aa12.16□□□□□ -0.46
TMEM55B-207ENST00000557041 TMEM116Q8NCL8 245 aa12.16□□□□□ -0.46
TMEM55B-207ENST00000557041 PRSS3P2Q8NHM4 247 aa12.16□□□□□ -0.46
TMEM55B-207ENST00000557041 NEU4Q8WWR8 484 aaPredicted RBP12.16□□□□□ -0.46
TMEM55B-207ENST00000557041 CLEC3BP05452 202 aa12.16□□□□□ -0.46
TMEM55B-207ENST00000557041 YPEL3P61236 119 aaPredicted RBP12.16□□□□□ -0.46
TMEM55B-207ENST00000557041 POLR3KQ9Y2Y1 108 aaPredicted RBP12.16□□□□□ -0.46
TMEM55B-207ENST00000557041 MTORP42345 2549 aa12.16□□□□□ -0.46
TMEM55B-207ENST00000557041 TEX22C9J3V5 150 aa12.16□□□□□ -0.46
TMEM55B-207ENST00000557041 NDUFB8O95169 186 aa12.16□□□□□ -0.46
TMEM55B-207ENST00000557041 PRTN3P24158 256 aa12.16□□□□□ -0.46
TMEM55B-207ENST00000557041 FXYD7P58549 80 aa12.16□□□□□ -0.46
TMEM55B-207ENST00000557041 HBBP68871 147 aa12.16□□□□□ -0.46
TMEM55B-207ENST00000557041 C1RLQ9NZP8 487 aa12.16□□□□□ -0.46
TMEM55B-207ENST00000557041 SPATA45Q537H7 98 aa12.15□□□□□ -0.46
TMEM55B-207ENST00000557041 Q71RC1 249 aaPredicted RBP12.15□□□□□ -0.46
TMEM55B-207ENST00000557041 IGHV3-11P01762 117 aa12.15□□□□□ -0.46
TMEM55B-207ENST00000557041 CTAG1AP78358 180 aa12.15□□□□□ -0.46
TMEM55B-207ENST00000557041 RELQ04864 619 aaPredicted RBP12.15□□□□□ -0.46
TMEM55B-207ENST00000557041 FAM71F2Q6NXP2 309 aa12.15□□□□□ -0.46
TMEM55B-207ENST00000557041 LINC00322Q6ZN03 302 aaPredicted RBP12.15□□□□□ -0.46
TMEM55B-207ENST00000557041 S100A7AQ86SG5 101 aa12.15□□□□□ -0.46
TMEM55B-207ENST00000557041 DYNAPQ8N1N2 210 aa12.15□□□□□ -0.46
TMEM55B-207ENST00000557041 TSKUQ8WUA8 353 aa12.15□□□□□ -0.46
TMEM55B-207ENST00000557041 NPIPB5A8MRT5 1133 aa12.14□□□□□ -0.47
TMEM55B-207ENST00000557041 IGLV2-8P01709 118 aa12.14□□□□□ -0.47
TMEM55B-207ENST00000557041 SAA4P35542 130 aa12.14□□□□□ -0.47
TMEM55B-207ENST00000557041 C15orf32Q32M92 178 aa12.14□□□□□ -0.47
TMEM55B-207ENST00000557041 HIF1ANQ9NWT6 349 aa12.14□□□□□ -0.47
TMEM55B-207ENST00000557041 A1L4Q6 167 aa12.14□□□□□ -0.47
TMEM55B-207ENST00000557041 M0R143 59 aa12.14□□□□□ -0.47
TMEM55B-207ENST00000557041 HLA-DMBP28068 263 aa12.14□□□□□ -0.47
TMEM55B-207ENST00000557041 THAP8Q8NA92 274 aa12.14□□□□□ -0.47
TMEM55B-207ENST00000557041 ZNF324O75467 553 aaPredicted RBP12.14□□□□□ -0.47
TMEM55B-207ENST00000557041 RHOGP84095 191 aa12.14□□□□□ -0.47
TMEM55B-207ENST00000557041 A0A1W2PS18 150 aa12.13□□□□□ -0.47
TMEM55B-207ENST00000557041 A8MWP6 167 aa12.13□□□□□ -0.47
TMEM55B-207ENST00000557041 EREGO14944 169 aa12.13□□□□□ -0.47
TMEM55B-207ENST00000557041 NDPQ00604 133 aa12.13□□□□□ -0.47
TMEM55B-207ENST00000557041 PSG8Q9UQ74 426 aa12.13□□□□□ -0.47
TMEM55B-207ENST00000557041 GPX1P07203 203 aa12.13□□□□□ -0.47
TMEM55B-207ENST00000557041 WFDC3Q8IUB2 231 aa12.13□□□□□ -0.47
TMEM55B-207ENST00000557041 LY96Q9Y6Y9 160 aa12.13□□□□□ -0.47
TMEM55B-207ENST00000557041 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.13□□□□□ -0.47
TMEM55B-207ENST00000557041 TRBV9A0A0B4J1U6 114 aa12.13□□□□□ -0.47
TMEM55B-207ENST00000557041 K7EIM0 57 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms