RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 COMMD9Q9P000 198 aa3.76□□□□□ -1.81
ATXN3-245ENST00000556958 DAPK2Q9UIK4 370 aa3.76□□□□□ -1.81
ATXN3-245ENST00000556958 RCL1Q9Y2P8 373 aaKnown RBP3.76□□□□□ -1.81
ATXN3-245ENST00000556958 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-245ENST00000556958 TRGV2A0A075B6R0 118 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 METTL21EPA6NDL7 271 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 FOXI3A8MTJ6 420 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-245ENST00000556958 A8MTW9 85 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 IBA57-AS1B1ANH7 110 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 F6UB75 175 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 PANO1I0J062 215 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 M0R2Z0 102 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 CORTO00230 105 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 SLC17A2O00624 439 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 ISLRO14498 428 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 CRXO43186 299 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-245ENST00000556958 TNFSF12O43508 249 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 ELK1P19419 428 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 SDC2P34741 201 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 SUB1P53999 127 aaKnown RBP eCLIP3.75□□□□□ -1.81
ATXN3-245ENST00000556958 GAMTQ14353 236 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 SPINK13Q1W4C9 94 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 KRTAP15-1Q3LI76 137 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 LINC01620Q4KN68 170 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 AMTNQ6UX39 209 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 OR6F1Q8NGZ6 308 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 OR4X1Q8NH49 305 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 LGALS14Q8TCE9 139 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 MRPS26Q9BYN8 205 aaKnown RBP3.75□□□□□ -1.81
ATXN3-245ENST00000556958 NDUFB11Q9NX14 153 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 PPP1R14DQ9NXH3 145 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 RAB22AQ9UL26 194 aa3.75□□□□□ -1.81
ATXN3-245ENST00000556958 TRAV1-2A0A0B4J238 106 aa3.74□□□□□ -1.81
ATXN3-245ENST00000556958 IGKV1D-13A0A0B4J2D9 117 aa3.74□□□□□ -1.81
ATXN3-245ENST00000556958 TMEM272A0A1B0GTI8 110 aa3.74□□□□□ -1.81
ATXN3-245ENST00000556958 SNURFLB1AK76 121 aa3.74□□□□□ -1.81
ATXN3-245ENST00000556958 SULT1C2O00338 296 aa3.74□□□□□ -1.81
ATXN3-245ENST00000556958 ZNF324O75467 553 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-245ENST00000556958 IGKV1-13P0DP09 117 aa3.74□□□□□ -1.81
ATXN3-245ENST00000556958 ZNF182P17025 639 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-245ENST00000556958 YPEL3P61236 119 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-245ENST00000556958 ZNF415Q09FC8 603 aa3.74□□□□□ -1.81
ATXN3-245ENST00000556958 CNIH2Q6PI25 160 aa3.74□□□□□ -1.81
ATXN3-245ENST00000556958 WFDC10BQ8IUB3 73 aa3.74□□□□□ -1.81
ATXN3-245ENST00000556958 CROCCP3Q8IVE0 287 aa3.74□□□□□ -1.81
ATXN3-245ENST00000556958 Q8N976 141 aa3.74□□□□□ -1.81
ATXN3-245ENST00000556958 SLC24A4Q8NFF2 622 aa3.74□□□□□ -1.81
ATXN3-245ENST00000556958 OR11H7Q8NGC8 314 aa3.74□□□□□ -1.81
ATXN3-245ENST00000556958 RNASE8Q8TDE3 154 aaKnown RBP3.74□□□□□ -1.81
ATXN3-245ENST00000556958 GFI1Q99684 422 aa3.74□□□□□ -1.81
ATXN3-245ENST00000556958 Q9HAA7 133 aa3.74□□□□□ -1.81
ATXN3-245ENST00000556958 CCL28Q9NRJ3 127 aa3.74□□□□□ -1.81
ATXN3-245ENST00000556958 KCNK7Q9Y2U2 307 aa3.74□□□□□ -1.81
ATXN3-245ENST00000556958 NSG2Q9Y328 171 aa3.74□□□□□ -1.81
ATXN3-245ENST00000556958 TRAV18A0A075B6X5 111 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 IGHV3-38A0A0C4DH36 116 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 A0A0J9YXV3 536 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 IFITM5A6NNB3 132 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 H7BYZ3 331 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 KRASP01116 189 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 IGKV1-17P01599 117 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 IL4P05112 153 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 DTYMKP23919 212 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 TGFBR1P36897 503 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 MEOX2P50222 304 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 CNN1P51911 297 aaKnown RBP3.73□□□□□ -1.81
ATXN3-245ENST00000556958 KRTAP10-8P60410 259 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 VBP1P61758 197 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 DHODHQ02127 395 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 ARL6IP1Q15041 203 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 CNPY1Q3B7I2 92 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 TIGITQ495A1 244 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 CDNFQ49AH0 187 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 GPR107Q5VW38 600 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 SUMO4Q6EEV6 95 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 BAP18Q8IXM2 172 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 OR10R2Q8NGX6 335 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 SECTM1Q8WVN6 248 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 BORCS5Q969J3 196 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 FAM210AQ96ND0 272 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 PRO0255Q9UI72 69 aa3.73□□□□□ -1.81
ATXN3-245ENST00000556958 TRAV12-2A0A075B6T6 113 aa3.72□□□□□ -1.81
ATXN3-245ENST00000556958 CCDC160A6NGH7 325 aa3.72□□□□□ -1.81
ATXN3-245ENST00000556958 FAM25AB3EWG3 89 aa3.72□□□□□ -1.81
ATXN3-245ENST00000556958 FAM25CB3EWG5 89 aa3.72□□□□□ -1.81
ATXN3-245ENST00000556958 FAM25GB3EWG6 89 aa3.72□□□□□ -1.81
ATXN3-245ENST00000556958 BOLA2-SMG1P6H3BVE0 249 aa3.72□□□□□ -1.81
ATXN3-245ENST00000556958 RD3LP0DJH9 198 aa3.72□□□□□ -1.81
ATXN3-245ENST00000556958 SRIP30626 198 aa3.72□□□□□ -1.81
ATXN3-245ENST00000556958 OPRK1P41145 380 aa3.72□□□□□ -1.81
ATXN3-245ENST00000556958 KRTAP10-7P60409 375 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-245ENST00000556958 HSPE1P61604 102 aaKnown RBP3.72□□□□□ -1.81
ATXN3-245ENST00000556958 DAZ2Q13117 558 aaKnown RBP3.72□□□□□ -1.81
ATXN3-245ENST00000556958 C1orf194Q5T5A4 169 aa3.72□□□□□ -1.81
ATXN3-245ENST00000556958 AADACL3Q5VUY0 350 aa3.72□□□□□ -1.81
ATXN3-245ENST00000556958 ZBTB8BQ8NAP8 495 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-245ENST00000556958 OR1S2Q8NGQ3 325 aa3.72□□□□□ -1.81
ATXN3-245ENST00000556958 OR5H6Q8NGV6 325 aa3.72□□□□□ -1.81
ATXN3-245ENST00000556958 OR51H1Q8NH63 302 aa3.72□□□□□ -1.81
ATXN3-245ENST00000556958 OR4A16Q8NH70 328 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 286.7 ms