RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 IGKV1D-13A0A0B4J2D9 117 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 IGHV7-4-1A0A0J9YVY3 117 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 TMEM235A6NFC5 223 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 E7EUB6 86 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 SULT1C2O00338 296 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 ZNF207O43670 478 aaKnown RBP3.37□□□□□ -1.87
HIF1A-209ENST00000556827 GNG7O60262 68 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 IFNA21P01568 189 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 IFNA17P01571 189 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 IGKV1-13P0DP09 117 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 CBX5P45973 191 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 EIF2B2P49770 351 aaKnown RBP3.37□□□□□ -1.87
HIF1A-209ENST00000556827 FXYD4P59646 89 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 FABP5Q01469 135 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 KLK9Q2XQG4 91 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 SOHLH1Q5JUK2 328 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 LAIR2Q6ISS4 152 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 CMTM1Q8IZ96 169 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 OR51H1Q8NH63 302 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 TXN2Q99757 166 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 DIABLOQ9NR28 239 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 CCL28Q9NRJ3 127 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 COMMD9Q9P000 198 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 KLK9Q9UKQ9 250 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 PRNDQ9UKY0 176 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 OR51B2Q9Y5P1 312 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 SORL1Q92673 2214 aa3.37□□□□□ -1.87
HIF1A-209ENST00000556827 RYR3Q15413 4870 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 IGKV1D-8A0A087WSZ0 117 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 IGHV3-21A0A0B4J1V1 117 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 TEX50A0A1B0GTY4 177 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 A0A1B0GW64 132 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 IGLC7A0M8Q6 106 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 DEFB4AO15263 64 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 KRASP01116 189 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 PPYP01298 95 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 P0DMU3 169 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 FAM231AP0DMU4 169 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 FAM231CP0DMU5 169 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 MIFP14174 115 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 NPPCP23582 126 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 SNCAP37840 140 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 SUB1P53999 127 aaKnown RBP eCLIP3.36□□□□□ -1.87
HIF1A-209ENST00000556827 OR10A3P58181 314 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 DEFB131AP59861 70 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 RND3P61587 244 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 NUTF2P61970 127 aaKnown RBP3.36□□□□□ -1.87
HIF1A-209ENST00000556827 ERHP84090 104 aaKnown RBP3.36□□□□□ -1.87
HIF1A-209ENST00000556827 POU2AF1Q16633 256 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 OGFRL1Q5TC84 451 aaPredicted RBP3.36□□□□□ -1.87
HIF1A-209ENST00000556827 OR8G2PQ6IF36 304 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 MORN3Q6PF18 240 aaPredicted RBP3.36□□□□□ -1.87
HIF1A-209ENST00000556827 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
HIF1A-209ENST00000556827 TCF24Q7RTU0 167 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 TMEM17Q86X19 198 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 OR10W1Q8NGF6 305 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 OR1P1Q8NH06 330 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 GIMAP1Q8WWP7 306 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 SLC25A46Q96AG3 418 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 DGCR14Q96DF8 476 aaKnown RBP3.36□□□□□ -1.87
HIF1A-209ENST00000556827 RNF2Q99496 336 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 CHRDL1Q9BU40 450 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 RNF126Q9BV68 326 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 VCX3BQ9H321 246 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 IFT46Q9NQC8 304 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 RABAC1Q9UI14 185 aa3.36□□□□□ -1.87
HIF1A-209ENST00000556827 F11RQ9Y624 299 aaKnown RBP3.36□□□□□ -1.87
HIF1A-209ENST00000556827 IGHV3-49A0A0A0MS15 119 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 A0A0A6YYH2 397 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 TRAV2A0A0B4J234 112 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 TRDV1A0A1B0GX56 115 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 A6NJ64 397 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 S1PR2O95136 353 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 IFNA10P01566 189 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 CTSGP08311 255 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 F2RP25116 425 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 HLA-DMBP28068 263 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 LPAR6P43657 344 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 RPL29P47914 159 aaKnown RBP3.35□□□□□ -1.87
HIF1A-209ENST00000556827 AP2S1P53680 142 aaPredicted RBP3.35□□□□□ -1.87
HIF1A-209ENST00000556827 WT1-ASQ06250 92 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 EIF4EBP1Q13541 118 aaPredicted RBP3.35□□□□□ -1.87
HIF1A-209ENST00000556827 PVRIGQ6DKI7 326 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 C22orf42Q6IC83 251 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 LPCAT3Q6P1A2 487 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 ZNF773Q6PK81 442 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 UBE2DNLQ8IWF7 75 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 LINC01561Q8N1V8 128 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 PINX1Q96BK5 328 aaKnown RBP3.35□□□□□ -1.87
HIF1A-209ENST00000556827 OR10C1Q96KK4 312 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 MS4A6AQ9H2W1 248 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 DUSP21Q9H596 190 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 NDUFA4L2Q9NRX3 87 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 NDUFB11Q9NX14 153 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 RHBDL2Q9NX52 303 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 APLNQ9ULZ1 77 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 SSR3Q9UNL2 185 aa3.35□□□□□ -1.87
HIF1A-209ENST00000556827 RRP15Q9Y3B9 282 aaKnown RBP3.35□□□□□ -1.87
HIF1A-209ENST00000556827 IGHV3OR16-13A0A075B7E8 117 aa3.34□□□□□ -1.87
HIF1A-209ENST00000556827 DEFB131BA0A096LNP1 70 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms