RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 OR10P1Q8NGE3 313 aa5.35□□□□□ -1.55
SCFD1-222ENST00000556768 GPR82Q96P67 336 aa5.35□□□□□ -1.55
SCFD1-222ENST00000556768 TBC1D24Q9ULP9 559 aa5.35□□□□□ -1.55
SCFD1-222ENST00000556768 FLVCR2Q9UPI3 526 aa5.35□□□□□ -1.55
SCFD1-222ENST00000556768 RYR2Q92736 4967 aa5.35□□□□□ -1.55
SCFD1-222ENST00000556768 C11orf94C9JXX5 98 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 ISLRO14498 428 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 SSSCA1O60232 199 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 PSMB3P49720 205 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 SELENOTP62341 195 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 TMEM144Q7Z5S9 345 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 THAP8Q8NA92 274 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 OR4D5Q8NGN0 318 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 OR1B1Q8NGR6 318 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 SMIM8Q96KF7 97 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 SLC25A22Q9H936 323 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 NPVFQ9HCQ7 196 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 RPRMQ9NS64 109 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 MGAT4CQ9UBM8 478 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 PLECQ15149 4684 aaKnown RBP5.34□□□□□ -1.55
SCFD1-222ENST00000556768 IGKV1D-37A0A075B6S9 117 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 H3BMM0 161 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 L7N2F9 121 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 DEFB4AO15263 64 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 LYRM1O43325 122 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 TCTAP57738 103 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 TAS2R30P59541 319 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 EWSR1Q01844 656 aaKnown RBP eCLIP5.34□□□□□ -1.55
SCFD1-222ENST00000556768 ACOT7LQ6ZUV0 252 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 OR4B1Q8NGF8 309 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 C2CD4CQ8TF44 421 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 MITD1Q8WV92 249 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 C20orf85Q9H1P6 137 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 HRH4Q9H3N8 390 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 XCL2Q9UBD3 114 aa5.34□□□□□ -1.55
SCFD1-222ENST00000556768 IGKV1OR2-108A0A075B7D4 117 aa5.33□□□□□ -1.56
SCFD1-222ENST00000556768 ZNF98A6NK75 572 aa5.33□□□□□ -1.56
SCFD1-222ENST00000556768 FAM25EA8MYX2 175 aa5.33□□□□□ -1.56
SCFD1-222ENST00000556768 HYPMO75409 117 aa5.33□□□□□ -1.56
SCFD1-222ENST00000556768 HLA-DRB4P13762 266 aa5.33□□□□□ -1.56
SCFD1-222ENST00000556768 PVALBP20472 110 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-222ENST00000556768 NANOS2P60321 138 aaKnown RBP5.33□□□□□ -1.56
SCFD1-222ENST00000556768 RAB31Q13636 194 aa5.33□□□□□ -1.56
SCFD1-222ENST00000556768 FOXI2Q6ZQN5 318 aa5.33□□□□□ -1.56
SCFD1-222ENST00000556768 LINC00299Q6ZSB3 139 aa5.33□□□□□ -1.56
SCFD1-222ENST00000556768 LRRC20Q8TCA0 184 aa5.33□□□□□ -1.56
SCFD1-222ENST00000556768 LINC00476Q8WZB0 136 aa5.33□□□□□ -1.56
SCFD1-222ENST00000556768 RSG1Q9BU20 258 aa5.33□□□□□ -1.56
SCFD1-222ENST00000556768 CCDC32Q9BV29 185 aa5.33□□□□□ -1.56
SCFD1-222ENST00000556768 CLEC5AQ9NY25 188 aa5.33□□□□□ -1.56
SCFD1-222ENST00000556768 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-222ENST00000556768 HLA-DRB4X5D2U9 266 aa5.33□□□□□ -1.56
SCFD1-222ENST00000556768 IGHV4-28A0A0C4DH34 117 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 FAM240BA0A1B0GVZ2 78 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 C5orf51A6NDU8 294 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 ZNF705EA8MWA4 302 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-222ENST00000556768 GOSR2O14653 212 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 PAGE4O60829 102 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 TSC22D2O75157 780 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 IGKV3-20P01619 116 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 TCRBP04435 133 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 OR5G3P0C626 314 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 METTL15P1P0C7V9 234 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 RPL7P18124 248 aaKnown RBP5.32□□□□□ -1.56
SCFD1-222ENST00000556768 BCAP31P51572 246 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 RRAS2P62070 204 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-222ENST00000556768 FGL1Q08830 312 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 TMEM88Q6PEY1 159 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 CYP2G1PQ6ZSU1 146 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 S100ZQ8WXG8 99 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 SDHCQ99643 169 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-222ENST00000556768 GGACTQ9BVM4 153 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 SAV1Q9H4B6 383 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-222ENST00000556768 NUDT15Q9NV35 164 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 HIGD1AQ9Y241 93 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 DNAH1Q9P2D7 4330 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 TRAV6A0A075B6T7 132 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 IGHV3OR16-12A0A075B7B8 117 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 TMEM189A5PLL7 270 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 SMIM9A6NGZ8 99 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-222ENST00000556768 IGLL5B9A064 214 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 PRSS46E5RG02 174 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 FNDC10F2Z333 226 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 MBPP02686 304 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-222ENST00000556768 GIG44P09565 113 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-222ENST00000556768 MED14OSP0DP75 135 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 GATA2P23769 480 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-222ENST00000556768 DLK1P80370 383 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 PSG9Q00887 426 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 PXDC1Q5TGL8 231 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 ZBTB8BQ8NAP8 495 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-222ENST00000556768 Q8NAQ8 132 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 TMEM208Q9BTX3 173 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 GOLT1BQ9Y3E0 138 aa5.32□□□□□ -1.56
SCFD1-222ENST00000556768 C7orf66A4D0T2 115 aa5.31□□□□□ -1.56
SCFD1-222ENST00000556768 LINC00869P0C866 280 aa5.31□□□□□ -1.56
SCFD1-222ENST00000556768 C4BPBP20851 252 aa5.31□□□□□ -1.56
SCFD1-222ENST00000556768 HLA-DMBP28068 263 aa5.31□□□□□ -1.56
SCFD1-222ENST00000556768 BTCP35070 178 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms