RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 BBC3Q96PG8 261 aaPredicted RBP7.91□□□□□ -1.14
TMEM260-211ENST00000556648 MLST8Q9BVC4 326 aa7.91□□□□□ -1.14
TMEM260-211ENST00000556648 SVEP1Q4LDE5 3571 aa7.9□□□□□ -1.14
TMEM260-211ENST00000556648 IZUMO1RA6ND01 250 aa7.9□□□□□ -1.14
TMEM260-211ENST00000556648 ATP5J2P56134 94 aa7.9□□□□□ -1.14
TMEM260-211ENST00000556648 SIGLEC15Q6ZMC9 328 aa7.9□□□□□ -1.14
TMEM260-211ENST00000556648 CIARTQ8N365 385 aaPredicted RBP7.9□□□□□ -1.14
TMEM260-211ENST00000556648 FAM110DQ8TAY7 271 aaPredicted RBP7.9□□□□□ -1.14
TMEM260-211ENST00000556648 FMC1Q96HJ9 113 aa7.9□□□□□ -1.14
TMEM260-211ENST00000556648 GPR82Q96P67 336 aa7.9□□□□□ -1.14
TMEM260-211ENST00000556648 TMUB1Q9BVT8 246 aa7.9□□□□□ -1.14
TMEM260-211ENST00000556648 C1RLQ9NZP8 487 aa7.9□□□□□ -1.14
TMEM260-211ENST00000556648 POLR3KQ9Y2Y1 108 aaPredicted RBP7.9□□□□□ -1.14
TMEM260-211ENST00000556648 IGSF10Q6WRI0 2623 aa7.9□□□□□ -1.14
TMEM260-211ENST00000556648 TRAV30A0A087WSZ9 112 aa7.9□□□□□ -1.15
TMEM260-211ENST00000556648 AMY1AP04745 511 aa7.9□□□□□ -1.15
TMEM260-211ENST00000556648 CTSGP08311 255 aa7.9□□□□□ -1.15
TMEM260-211ENST00000556648 IGHV4-38-2P0DP08 117 aa7.9□□□□□ -1.15
TMEM260-211ENST00000556648 RAB4BP61018 213 aa7.9□□□□□ -1.15
TMEM260-211ENST00000556648 TCF24Q7RTU0 167 aa7.9□□□□□ -1.15
TMEM260-211ENST00000556648 PRNTQ86SH4 94 aa7.9□□□□□ -1.15
TMEM260-211ENST00000556648 BPIFA4PQ86YQ2 179 aa7.9□□□□□ -1.15
TMEM260-211ENST00000556648 C5orf56Q8N8D9 126 aa7.9□□□□□ -1.15
TMEM260-211ENST00000556648 OR4F17Q8NGA8 305 aa7.9□□□□□ -1.15
TMEM260-211ENST00000556648 GNB1LQ9BYB4 327 aa7.9□□□□□ -1.15
TMEM260-211ENST00000556648 PRDM13Q9H4Q3 707 aa7.9□□□□□ -1.15
TMEM260-211ENST00000556648 NAT8BQ9UHF3 227 aa7.9□□□□□ -1.15
TMEM260-211ENST00000556648 IGHV1-69DA0A0B4J2H0 117 aa7.89□□□□□ -1.15
TMEM260-211ENST00000556648 ZNF785A8K8V0 405 aa7.89□□□□□ -1.15
TMEM260-211ENST00000556648 M0R3E3 92 aa7.89□□□□□ -1.15
TMEM260-211ENST00000556648 IGHV1-69P01742 117 aa7.89□□□□□ -1.15
TMEM260-211ENST00000556648 GPR183P32249 361 aa7.89□□□□□ -1.15
TMEM260-211ENST00000556648 C15orf32Q32M92 178 aa7.89□□□□□ -1.15
TMEM260-211ENST00000556648 NUP35Q8NFH5 326 aa7.89□□□□□ -1.15
TMEM260-211ENST00000556648 CMTM2Q8TAZ6 248 aa7.89□□□□□ -1.15
TMEM260-211ENST00000556648 PIFOQ8TCI5 191 aa7.89□□□□□ -1.15
TMEM260-211ENST00000556648 NEU1Q99519 415 aa7.89□□□□□ -1.15
TMEM260-211ENST00000556648 C19orf71A6NCJ1 209 aa7.88□□□□□ -1.15
TMEM260-211ENST00000556648 GZMBP10144 247 aa7.88□□□□□ -1.15
TMEM260-211ENST00000556648 CRISP2P16562 243 aa7.88□□□□□ -1.15
TMEM260-211ENST00000556648 RHOGP84095 191 aa7.88□□□□□ -1.15
TMEM260-211ENST00000556648 CLEC2AQ6UVW9 174 aa7.88□□□□□ -1.15
TMEM260-211ENST00000556648 NOL4LQ96MY1 436 aaPredicted RBP7.88□□□□□ -1.15
TMEM260-211ENST00000556648 MS4A10Q96PG2 267 aa7.88□□□□□ -1.15
TMEM260-211ENST00000556648 THYN1Q9P016 225 aa7.88□□□□□ -1.15
TMEM260-211ENST00000556648 LINC00527Q9UJ94 153 aa7.88□□□□□ -1.15
TMEM260-211ENST00000556648 TRBV9A0A0B4J1U6 114 aa7.88□□□□□ -1.15
TMEM260-211ENST00000556648 BMPR1BO00238 502 aa7.88□□□□□ -1.15
TMEM260-211ENST00000556648 SERF1AO75920 110 aa7.88□□□□□ -1.15
TMEM260-211ENST00000556648 JOSD1Q15040 202 aaPredicted RBP7.88□□□□□ -1.15
TMEM260-211ENST00000556648 WDR73Q6P4I2 378 aa7.88□□□□□ -1.15
TMEM260-211ENST00000556648 ZNF502Q8TBZ5 544 aa7.88□□□□□ -1.15
TMEM260-211ENST00000556648 TSKUQ8WUA8 353 aa7.88□□□□□ -1.15
TMEM260-211ENST00000556648 CCDC140Q96MF4 163 aa7.88□□□□□ -1.15
TMEM260-211ENST00000556648 RPP21Q9H633 154 aaKnown RBP7.88□□□□□ -1.15
TMEM260-211ENST00000556648 GNB4Q9HAV0 340 aa7.88□□□□□ -1.15
TMEM260-211ENST00000556648 VPS13CQ709C8 3753 aa7.87□□□□□ -1.15
TMEM260-211ENST00000556648 HIGD1CA8MV81 97 aa7.87□□□□□ -1.15
TMEM260-211ENST00000556648 SLAQ13239 276 aa7.87□□□□□ -1.15
TMEM260-211ENST00000556648 IGFL4Q6B9Z1 124 aa7.87□□□□□ -1.15
TMEM260-211ENST00000556648 GTSF1Q8WW33 167 aa7.87□□□□□ -1.15
TMEM260-211ENST00000556648 TMEM18Q96B42 140 aa7.87□□□□□ -1.15
TMEM260-211ENST00000556648 PRSS22Q9GZN4 317 aa7.87□□□□□ -1.15
TMEM260-211ENST00000556648 ZNF492Q9P255 531 aa7.87□□□□□ -1.15
TMEM260-211ENST00000556648 SMAD5-AS1Q9Y6J3 95 aa7.87□□□□□ -1.15
TMEM260-211ENST00000556648 ZFHX3Q15911 3703 aa7.87□□□□□ -1.15
TMEM260-211ENST00000556648 HLA-DMBP28068 263 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 LY6EQ16553 131 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 C9orf152Q5JTZ5 239 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 SMIM12Q96EX1 92 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 ZC2HC1AQ96GY0 325 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 RCHY1Q96PM5 261 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 SSBP4Q9BWG4 385 aaPredicted RBP7.86□□□□□ -1.15
TMEM260-211ENST00000556648 PRO1933Q9H354 126 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 ZFAND3Q9H8U3 227 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 MOB4Q9Y3A3 225 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 COL12A1Q99715 3063 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 DIRC3C9JPN6 131 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 P01737 135 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 APCSP02743 223 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 CLEC3BP05452 202 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 CD33P20138 364 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 SRIP30626 198 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 RPL19P84098 196 aaKnown RBP7.86□□□□□ -1.15
TMEM260-211ENST00000556648 IQCJQ1A5X6 159 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 KLK9Q2XQG4 91 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 TOMM20LQ6UXN7 152 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 CLEC19AQ6UXS0 136 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 TMEM75Q8N9X5 138 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 OR5R1Q8NH85 324 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 VN1R17PQ8TDU5 208 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 C8orf49Q96NF6 230 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 KLK9Q9UKQ9 250 aa7.86□□□□□ -1.15
TMEM260-211ENST00000556648 IGKV2-40A0A087WW87 121 aaPredicted RBP7.85□□□□□ -1.15
TMEM260-211ENST00000556648 IGHV3-66A0A0C4DH42 116 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 A0A1B0GXF2 115 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 A1L4Q6 167 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 GOSR1O95249 250 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 AVPP01185 164 aa7.85□□□□□ -1.15
TMEM260-211ENST00000556648 IGKV2D-40P01614 121 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms