RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 IGSF10Q6WRI0 2623 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 ATMQ13315 3056 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 BOD1L1Q8NFC6 3051 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 LOC400499M0QZD8 3231 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 EPG5Q9HCE0 2579 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 IGLV11-55A0A075B6I3 123 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 TRBV19A0A075B6N1 114 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 TRAV30A0A087WSZ9 112 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 A0A1W2PS18 150 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 FAM231BA6NCW3 169 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 A6NNC1 897 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 HIGD1CA8MV81 97 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 ZNF705FA8MVS1 300 aaPredicted RBP4.25□□□□□ -1.73
GPHN-213ENST00000556501 A8MWL6 223 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 H3BTX0 84 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 MRPS12O15235 138 aaKnown RBP4.25□□□□□ -1.73
GPHN-213ENST00000556501 ZNF253O75346 499 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 IGLV2-11P01706 119 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 P01737 135 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 HLA-DRB1P01911 266 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 SNRPCP09234 159 aaKnown RBP4.25□□□□□ -1.73
GPHN-213ENST00000556501 ZNF705DP0CH99 300 aaPredicted RBP4.25□□□□□ -1.73
GPHN-213ENST00000556501 ZNF705BP0CI00 300 aaPredicted RBP4.25□□□□□ -1.73
GPHN-213ENST00000556501 IGLC2P0DOY2 106 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 CDKN1AP38936 164 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 AMTP48728 403 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 HBBP68871 147 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 TMEM95Q3KNT9 176 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 KIAA1644Q3SXP7 199 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 GDF5OSQ5U4N7 250 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 ASPHD1Q5U4P2 390 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 VMO1Q7Z5L0 202 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 S100A7AQ86SG5 101 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 MRPL52Q86TS9 123 aaKnown RBP4.25□□□□□ -1.73
GPHN-213ENST00000556501 BPIFA4PQ86YQ2 179 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 LYPD1Q8N2G4 141 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 LINC00469Q8N7U9 141 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 Q8N976 141 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 TMEM75Q8N9X5 138 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 OR4F17Q8NGA8 305 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 C18orf32Q8TCD1 76 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 ARPC1AQ92747 370 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 RNF125Q96EQ8 232 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 NRN1Q9NPD7 142 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 TBL2Q9Y4P3 447 aaKnown RBP4.25□□□□□ -1.73
GPHN-213ENST00000556501 RNF114Q9Y508 228 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 HILPDAQ9Y5L2 63 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 ABCA4P78363 2273 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 NBEAQ8NFP9 2946 aa4.25□□□□□ -1.73
GPHN-213ENST00000556501 SPENQ96T58 3664 aaKnown RBP4.24□□□□□ -1.73
GPHN-213ENST00000556501 A0A1W2PPR1 153 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 VWC2LB2RUY7 222 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 F8W735 103 aaPredicted RBP4.24□□□□□ -1.73
GPHN-213ENST00000556501 IL4P05112 153 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 PMCHP20382 165 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 MFAP4P55083 255 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 NDPQ00604 133 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 PDE6HQ13956 83 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 HES1Q14469 280 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 KLK9Q2XQG4 91 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 ZNF562Q6V9R5 426 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 SIGLEC15Q6ZMC9 328 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 LINC00322Q6ZN03 302 aaPredicted RBP4.24□□□□□ -1.73
GPHN-213ENST00000556501 RBPMS2Q6ZRY4 209 aaKnown RBP4.24□□□□□ -1.73
GPHN-213ENST00000556501 GOLT1AQ6ZVE7 132 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 TCF24Q7RTU0 167 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 NIT1Q86X76 327 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 DYNAPQ8N1N2 210 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 EXOC3-AS1Q8N2X6 119 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 TTC9CQ8N5M4 171 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 ZNF491Q8N8L2 437 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 VN1R17PQ8TDU5 208 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 ALKBH7Q9BT30 221 aaPredicted RBP4.24□□□□□ -1.73
GPHN-213ENST00000556501 SIRPDQ9H106 197 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 KLK9Q9UKQ9 250 aa4.24□□□□□ -1.73
GPHN-213ENST00000556501 ZFYVE26Q68DK2 2539 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 TRAV8-1A0A0A6YYK1 113 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 IGHV2-70DA0A0C4DH43 119 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 A0A1B0GV90 55 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 SERTM2A0A1B0GWG4 89 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 A0A1W2PRD5 423 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 A0A1W2PRF3 423 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 A0A1W2PRM7 423 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 ZNF785A8K8V0 405 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 DIRC3C9JPN6 131 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 K7EQM0 130 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 WIPF1O43516 503 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 GNG7O60262 68 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 SCGB2A1O75556 95 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 TMEM11P17152 192 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 RAB4AP20338 218 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 CD24P25063 80 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 ZFP36P26651 326 aaKnown RBP4.23□□□□□ -1.73
GPHN-213ENST00000556501 FCGR2BP31994 310 aaPredicted RBP4.23□□□□□ -1.73
GPHN-213ENST00000556501 EFNA4P52798 201 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 KRTDAPP60985 99 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 PSG3Q16557 428 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 KLF17Q5JT82 389 aaPredicted RBP4.23□□□□□ -1.73
GPHN-213ENST00000556501 FAM162BQ5T6X4 162 aa4.23□□□□□ -1.73
GPHN-213ENST00000556501 Q71RC1 249 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms