RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 VWC2Q2TAL6 325 aa7.13□□□□□ -1.27
SCFD1-220ENST00000556486 C1orf134Q5TEV5 83 aa7.13□□□□□ -1.27
SCFD1-220ENST00000556486 GPR107Q5VW38 600 aa7.13□□□□□ -1.27
SCFD1-220ENST00000556486 SIGLEC15Q6ZMC9 328 aa7.13□□□□□ -1.27
SCFD1-220ENST00000556486 SELENOHQ8IZQ5 122 aaKnown RBP7.13□□□□□ -1.27
SCFD1-220ENST00000556486 RNASE11Q8TAA1 199 aaKnown RBP7.13□□□□□ -1.27
SCFD1-220ENST00000556486 FAM210BQ96KR6 192 aa7.13□□□□□ -1.27
SCFD1-220ENST00000556486 GPR132Q9UNW8 380 aa7.13□□□□□ -1.27
SCFD1-220ENST00000556486 C14orf166Q9Y224 244 aaKnown RBP7.13□□□□□ -1.27
SCFD1-220ENST00000556486 U3KQ87 197 aa7.13□□□□□ -1.27
SCFD1-220ENST00000556486 HLA-DRB4X5D2U9 266 aa7.13□□□□□ -1.27
SCFD1-220ENST00000556486 NACAE9PAV3 2078 aa7.13□□□□□ -1.27
SCFD1-220ENST00000556486 NDUFB4O95168 129 aa7.12□□□□□ -1.27
SCFD1-220ENST00000556486 RD3LP0DJH9 198 aa7.12□□□□□ -1.27
SCFD1-220ENST00000556486 NPY1RP25929 384 aa7.12□□□□□ -1.27
SCFD1-220ENST00000556486 SCGB2B2Q4G0G5 96 aa7.12□□□□□ -1.27
SCFD1-220ENST00000556486 OR8G2PQ6IF36 304 aa7.12□□□□□ -1.27
SCFD1-220ENST00000556486 CCDC190Q86UF4 302 aa7.12□□□□□ -1.27
SCFD1-220ENST00000556486 NHLRC2Q8NBF2 726 aa7.12□□□□□ -1.27
SCFD1-220ENST00000556486 SMIM4Q8WVI0 70 aa7.12□□□□□ -1.27
SCFD1-220ENST00000556486 GPR146Q96CH1 333 aa7.12□□□□□ -1.27
SCFD1-220ENST00000556486 MIXL1Q9H2W2 232 aa7.12□□□□□ -1.27
SCFD1-220ENST00000556486 AAMDCQ9H7C9 122 aa7.12□□□□□ -1.27
SCFD1-220ENST00000556486 DNAH5Q8TE73 4624 aa7.12□□□□□ -1.27
SCFD1-220ENST00000556486 TEX48A0A1B0GUV7 120 aa7.11□□□□□ -1.27
SCFD1-220ENST00000556486 CTDSPLO15194 276 aa7.11□□□□□ -1.27
SCFD1-220ENST00000556486 IFNA21P01568 189 aa7.11□□□□□ -1.27
SCFD1-220ENST00000556486 SULT1A3P0DMM9 295 aa7.11□□□□□ -1.27
SCFD1-220ENST00000556486 SULT1A4P0DMN0 295 aa7.11□□□□□ -1.27
SCFD1-220ENST00000556486 PSG1P11464 419 aa7.11□□□□□ -1.27
SCFD1-220ENST00000556486 SOHLH1Q5JUK2 328 aa7.11□□□□□ -1.27
SCFD1-220ENST00000556486 C1orf194Q5T5A4 169 aa7.11□□□□□ -1.27
SCFD1-220ENST00000556486 SPATA31B1PQ5VZV4 182 aa7.11□□□□□ -1.27
SCFD1-220ENST00000556486 GGNBP1Q5YKI7 109 aa7.11□□□□□ -1.27
SCFD1-220ENST00000556486 OR51G1Q8NGK1 321 aa7.11□□□□□ -1.27
SCFD1-220ENST00000556486 TMEM18Q96B42 140 aa7.11□□□□□ -1.27
SCFD1-220ENST00000556486 ZNF503Q96F45 646 aa7.11□□□□□ -1.27
SCFD1-220ENST00000556486 PRRT1Q99946 306 aa7.11□□□□□ -1.27
SCFD1-220ENST00000556486 KRTAP4-9Q9BYQ8 210 aa7.11□□□□□ -1.27
SCFD1-220ENST00000556486 XCL2Q9UBD3 114 aa7.11□□□□□ -1.27
SCFD1-220ENST00000556486 RABL2AQ9UBK7 228 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-220ENST00000556486 RABL2BQ9UNT1 228 aa7.11□□□□□ -1.27
SCFD1-220ENST00000556486 DMBT1Q9UGM3 2413 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-220ENST00000556486 A0A0B4J2A0 478 aa7.1□□□□□ -1.27
SCFD1-220ENST00000556486 CEBPZOSA8MTT3 80 aa7.1□□□□□ -1.27
SCFD1-220ENST00000556486 DISC1C4P0D8 188 aa7.1□□□□□ -1.27
SCFD1-220ENST00000556486 SOCS3O14543 225 aa7.1□□□□□ -1.27
SCFD1-220ENST00000556486 SPART-AS1P0CW21 52 aa7.1□□□□□ -1.27
SCFD1-220ENST00000556486 AKAIN1P0CW23 69 aa7.1□□□□□ -1.27
SCFD1-220ENST00000556486 GPX4P36969 197 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-220ENST00000556486 PSMB3P49720 205 aa7.1□□□□□ -1.27
SCFD1-220ENST00000556486 PAX9P55771 341 aa7.1□□□□□ -1.27
SCFD1-220ENST00000556486 OXA1LQ15070 435 aa7.1□□□□□ -1.27
SCFD1-220ENST00000556486 ZNF79Q15937 498 aa7.1□□□□□ -1.27
SCFD1-220ENST00000556486 SAMD13Q5VXD3 122 aa7.1□□□□□ -1.27
SCFD1-220ENST00000556486 FAAP20Q6NZ36 180 aa7.1□□□□□ -1.27
SCFD1-220ENST00000556486 FOXI2Q6ZQN5 318 aa7.1□□□□□ -1.27
SCFD1-220ENST00000556486 ZNF709Q8N972 641 aa7.1□□□□□ -1.27
SCFD1-220ENST00000556486 OR4C16Q8NGL9 310 aa7.1□□□□□ -1.27
SCFD1-220ENST00000556486 NAA50Q9GZZ1 169 aaKnown RBP7.1□□□□□ -1.27
SCFD1-220ENST00000556486 SAV1Q9H4B6 383 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-220ENST00000556486 SHPKQ9UHJ6 478 aa7.1□□□□□ -1.27
SCFD1-220ENST00000556486 IGKV1D-37A0A075B6S9 117 aa7.09□□□□□ -1.27
SCFD1-220ENST00000556486 PIGBOS1A0A0B4J2F0 54 aa7.09□□□□□ -1.27
SCFD1-220ENST00000556486 A8MTW9 85 aa7.09□□□□□ -1.27
SCFD1-220ENST00000556486 SMIM18P0DKX4 95 aa7.09□□□□□ -1.27
SCFD1-220ENST00000556486 HTN3P15516 51 aa7.09□□□□□ -1.27
SCFD1-220ENST00000556486 CCR6P51684 374 aa7.09□□□□□ -1.27
SCFD1-220ENST00000556486 EMP1P54849 157 aa7.09□□□□□ -1.27
SCFD1-220ENST00000556486 SUPT4H1P63272 117 aaKnown RBP7.09□□□□□ -1.27
SCFD1-220ENST00000556486 KLF9Q13886 244 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-220ENST00000556486 GDF5OSQ5U4N7 250 aa7.09□□□□□ -1.27
SCFD1-220ENST00000556486 DTD1Q8TEA8 209 aa7.09□□□□□ -1.27
SCFD1-220ENST00000556486 ACY3Q96HD9 319 aa7.09□□□□□ -1.27
SCFD1-220ENST00000556486 KCNIP3Q9Y2W7 256 aa7.09□□□□□ -1.27
SCFD1-220ENST00000556486 RFNGQ9Y644 331 aa7.09□□□□□ -1.27
SCFD1-220ENST00000556486 ANKRD20A5PA0PJZ0 165 aa7.08□□□□□ -1.28
SCFD1-220ENST00000556486 ISLRO14498 428 aa7.08□□□□□ -1.28
SCFD1-220ENST00000556486 ID1P41134 155 aa7.08□□□□□ -1.28
SCFD1-220ENST00000556486 SRPXP78539 464 aa7.08□□□□□ -1.28
SCFD1-220ENST00000556486 GAMTQ14353 236 aa7.08□□□□□ -1.28
SCFD1-220ENST00000556486 SMCO1Q147U7 214 aa7.08□□□□□ -1.28
SCFD1-220ENST00000556486 RNF212Q495C1 297 aa7.08□□□□□ -1.28
SCFD1-220ENST00000556486 LGI3Q8N145 548 aa7.08□□□□□ -1.28
SCFD1-220ENST00000556486 OR51S1Q8NGJ8 323 aa7.08□□□□□ -1.28
SCFD1-220ENST00000556486 OCC1Q8TAD7 63 aa7.08□□□□□ -1.28
SCFD1-220ENST00000556486 SCGB3A2Q96PL1 93 aa7.08□□□□□ -1.28
SCFD1-220ENST00000556486 DUXBA0A1W2PPF3 345 aa7.07□□□□□ -1.28
SCFD1-220ENST00000556486 SNRPGP15A8MWD9 76 aa7.07□□□□□ -1.28
SCFD1-220ENST00000556486 RGS5O15539 181 aa7.07□□□□□ -1.28
SCFD1-220ENST00000556486 PITX3O75364 302 aa7.07□□□□□ -1.28
SCFD1-220ENST00000556486 CFDP00746 253 aaPredicted RBP7.07□□□□□ -1.28
SCFD1-220ENST00000556486 FABP1P07148 127 aa7.07□□□□□ -1.28
SCFD1-220ENST00000556486 MEOX2P50222 304 aa7.07□□□□□ -1.28
SCFD1-220ENST00000556486 ZNF90Q03938 601 aa7.07□□□□□ -1.28
SCFD1-220ENST00000556486 TRGV9Q99603 122 aa7.07□□□□□ -1.28
SCFD1-220ENST00000556486 NIPSNAP3BQ9BS92 247 aa7.07□□□□□ -1.28
SCFD1-220ENST00000556486 KRTAP3-1Q9BYR8 98 aa7.07□□□□□ -1.28
SCFD1-220ENST00000556486 SCP2D1Q9UJQ7 156 aa7.07□□□□□ -1.28
SCFD1-220ENST00000556486 A0A0J9YX75 114 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms