RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 C11orf53Q8IXP5 236 aa12.17□□□□□ -0.46
ARHGEF40-207ENST00000556399 SCGB3A1Q96QR1 104 aa12.17□□□□□ -0.46
ARHGEF40-207ENST00000556399 IGKV2-40A0A087WW87 121 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF40-207ENST00000556399 IGKV2D-40P01614 121 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF40-207ENST00000556399 ID1P41134 155 aa12.17□□□□□ -0.46
ARHGEF40-207ENST00000556399 ATP5G2Q06055 141 aa12.17□□□□□ -0.46
ARHGEF40-207ENST00000556399 ZNF474Q6S9Z5 364 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF40-207ENST00000556399 MRPL16Q9NX20 251 aaKnown RBP12.17□□□□□ -0.46
ARHGEF40-207ENST00000556399 IGHV1-3A0A0C4DH29 117 aa12.16□□□□□ -0.46
ARHGEF40-207ENST00000556399 A0A0G2JLM5 398 aa12.16□□□□□ -0.46
ARHGEF40-207ENST00000556399 A0A1B0GWB2 263 aa12.16□□□□□ -0.46
ARHGEF40-207ENST00000556399 DPM2O94777 84 aa12.16□□□□□ -0.46
ARHGEF40-207ENST00000556399 FAM169BQ8N8A8 192 aa12.16□□□□□ -0.46
ARHGEF40-207ENST00000556399 MBD3L4A6NDZ8 208 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF40-207ENST00000556399 MBD3L3A6NE82 208 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF40-207ENST00000556399 MBD3L5A6NJ08 208 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF40-207ENST00000556399 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF40-207ENST00000556399 ARMS2P0C7Q2 107 aa12.16□□□□□ -0.46
ARHGEF40-207ENST00000556399 MBD3L2Q8NHZ7 208 aaPredicted RBP12.16□□□□□ -0.46
ARHGEF40-207ENST00000556399 USF3Q68DE3 2245 aa12.16□□□□□ -0.46
ARHGEF40-207ENST00000556399 FREM1Q5H8C1 2179 aa12.16□□□□□ -0.46
ARHGEF40-207ENST00000556399 GAGE12BA1L429 117 aa12.16□□□□□ -0.46
ARHGEF40-207ENST00000556399 COX6B1P14854 86 aa12.16□□□□□ -0.46
ARHGEF40-207ENST00000556399 SRSF6Q13247 344 aaKnown RBP12.16□□□□□ -0.46
ARHGEF40-207ENST00000556399 PLA2G5P39877 138 aa12.15□□□□□ -0.46
ARHGEF40-207ENST00000556399 ZNF492Q9P255 531 aa12.15□□□□□ -0.46
ARHGEF40-207ENST00000556399 SIGLEC9Q9Y336 463 aa12.15□□□□□ -0.46
ARHGEF40-207ENST00000556399 SPTBN1Q01082 2364 aaKnown RBP12.15□□□□□ -0.46
ARHGEF40-207ENST00000556399 PF4V1P10720 104 aa12.15□□□□□ -0.46
ARHGEF40-207ENST00000556399 DGAT2L7PQ6IED9 249 aa12.15□□□□□ -0.46
ARHGEF40-207ENST00000556399 ABCA1O95477 2261 aa12.15□□□□□ -0.46
ARHGEF40-207ENST00000556399 IGKCP01834 107 aa12.15□□□□□ -0.46
ARHGEF40-207ENST00000556399 PSG3Q16557 428 aa12.15□□□□□ -0.46
ARHGEF40-207ENST00000556399 SAMD5Q5TGI4 173 aa12.15□□□□□ -0.46
ARHGEF40-207ENST00000556399 FAM168AQ92567 244 aa12.15□□□□□ -0.46
ARHGEF40-207ENST00000556399 IFI27P40305 119 aaPredicted RBP12.15□□□□□ -0.46
ARHGEF40-207ENST00000556399 CT83Q5H943 113 aa12.15□□□□□ -0.46
ARHGEF40-207ENST00000556399 ZNF295-AS1Q8N0V1 137 aa12.15□□□□□ -0.46
ARHGEF40-207ENST00000556399 SAMD13Q5VXD3 122 aa12.14□□□□□ -0.47
ARHGEF40-207ENST00000556399 WNK2Q9Y3S1 2297 aa12.14□□□□□ -0.47
ARHGEF40-207ENST00000556399 IGHV1-24A0A0C4DH33 117 aa12.14□□□□□ -0.47
ARHGEF40-207ENST00000556399 SRRM4A7MD48 611 aaKnown RBP12.14□□□□□ -0.47
ARHGEF40-207ENST00000556399 LYPD2Q6UXB3 125 aa12.14□□□□□ -0.47
ARHGEF40-207ENST00000556399 INTS1Q8N201 2190 aaKnown RBP12.14□□□□□ -0.47
ARHGEF40-207ENST00000556399 LGALS3P17931 250 aaKnown RBP12.14□□□□□ -0.47
ARHGEF40-207ENST00000556399 CLEC19AQ6UXS0 136 aa12.14□□□□□ -0.47
ARHGEF40-207ENST00000556399 NCOR1P1Q9H4R4 102 aa12.14□□□□□ -0.47
ARHGEF40-207ENST00000556399 KLF17Q5JT82 389 aaPredicted RBP12.14□□□□□ -0.47
ARHGEF40-207ENST00000556399 AMN1Q8IY45 258 aa12.14□□□□□ -0.47
ARHGEF40-207ENST00000556399 ABHD17AQ96GS6 310 aa12.14□□□□□ -0.47
ARHGEF40-207ENST00000556399 WT1-ASQ06250 92 aa12.13□□□□□ -0.47
ARHGEF40-207ENST00000556399 ZNF318Q5VUA4 2279 aa12.13□□□□□ -0.47
ARHGEF40-207ENST00000556399 SH2D1AO60880 128 aa12.13□□□□□ -0.47
ARHGEF40-207ENST00000556399 RAXQ9Y2V3 346 aa12.13□□□□□ -0.47
ARHGEF40-207ENST00000556399 FAM71F2Q6NXP2 309 aa12.13□□□□□ -0.47
ARHGEF40-207ENST00000556399 ZNF833PQ6ZTB9 187 aa12.13□□□□□ -0.47
ARHGEF40-207ENST00000556399 KIR2DL4Q99706 377 aa12.13□□□□□ -0.47
ARHGEF40-207ENST00000556399 AKAP6Q13023 2319 aa12.13□□□□□ -0.47
ARHGEF40-207ENST00000556399 FAM231BA6NCW3 169 aa12.13□□□□□ -0.47
ARHGEF40-207ENST00000556399 KIR3DS1Q14943 382 aa12.13□□□□□ -0.47
ARHGEF40-207ENST00000556399 TMEM190Q8WZ59 177 aa12.13□□□□□ -0.47
ARHGEF40-207ENST00000556399 CLEC2AQ6UVW9 174 aa12.12□□□□□ -0.47
ARHGEF40-207ENST00000556399 BCL6BQ8N143 479 aaPredicted RBP12.12□□□□□ -0.47
ARHGEF40-207ENST00000556399 CST9LQ9H4G1 147 aa12.12□□□□□ -0.47
ARHGEF40-207ENST00000556399 ADAMTS9Q9P2N4 1935 aa12.12□□□□□ -0.47
ARHGEF40-207ENST00000556399 ASIPP42127 132 aa12.12□□□□□ -0.47
ARHGEF40-207ENST00000556399 Q6ZVH6 145 aa12.12□□□□□ -0.47
ARHGEF40-207ENST00000556399 NUP37Q8NFH4 326 aa12.12□□□□□ -0.47
ARHGEF40-207ENST00000556399 ZNF418Q8TF45 676 aaPredicted RBP12.12□□□□□ -0.47
ARHGEF40-207ENST00000556399 CFHR2P36980 270 aa12.12□□□□□ -0.47
ARHGEF40-207ENST00000556399 GATA4P43694 442 aa12.12□□□□□ -0.47
ARHGEF40-207ENST00000556399 FAM74A4Q5TZK3 123 aa12.12□□□□□ -0.47
ARHGEF40-207ENST00000556399 GTSCR1Q86UQ5 136 aa12.12□□□□□ -0.47
ARHGEF40-207ENST00000556399 Q8TAT8 98 aa12.12□□□□□ -0.47
ARHGEF40-207ENST00000556399 FXYD5Q96DB9 178 aa12.12□□□□□ -0.47
ARHGEF40-207ENST00000556399 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.12□□□□□ -0.47
ARHGEF40-207ENST00000556399 IGLV1-44P01699 117 aa12.12□□□□□ -0.47
ARHGEF40-207ENST00000556399 POU2AF1Q16633 256 aa12.12□□□□□ -0.47
ARHGEF40-207ENST00000556399 SMKR1H3BMG3 65 aa12.11□□□□□ -0.47
ARHGEF40-207ENST00000556399 OCIAD2Q56VL3 154 aa12.11□□□□□ -0.47
ARHGEF40-207ENST00000556399 TMEM170BQ5T4T1 132 aa12.11□□□□□ -0.47
ARHGEF40-207ENST00000556399 LYPD1Q8N2G4 141 aa12.11□□□□□ -0.47
ARHGEF40-207ENST00000556399 SLC50A1Q9BRV3 221 aa12.11□□□□□ -0.47
ARHGEF40-207ENST00000556399 SYT8Q8NBV8 401 aa12.11□□□□□ -0.47
ARHGEF40-207ENST00000556399 NDUFS8O00217 210 aa12.11□□□□□ -0.47
ARHGEF40-207ENST00000556399 ADIPOQQ15848 244 aa12.11□□□□□ -0.47
ARHGEF40-207ENST00000556399 APOMO95445 188 aa12.1□□□□□ -0.47
ARHGEF40-207ENST00000556399 SSBP2P81877 361 aaPredicted RBP12.1□□□□□ -0.47
ARHGEF40-207ENST00000556399 SRSF1Q07955 248 aaKnown RBP eCLIP12.1□□□□□ -0.471e-6■■■■□ 20.3
ARHGEF40-207ENST00000556399 BUB1B-PAK6H3BSN5 160 aa12.1□□□□□ -0.47
ARHGEF40-207ENST00000556399 ZNF479Q96JC4 524 aa12.1□□□□□ -0.47
ARHGEF40-207ENST00000556399 DNAH12Q6ZR08 3092 aa12.1□□□□□ -0.47
ARHGEF40-207ENST00000556399 CHD3Q12873 2000 aaKnown RBP12.1□□□□□ -0.47
ARHGEF40-207ENST00000556399 TRGV3P03979 118 aa12.1□□□□□ -0.47
ARHGEF40-207ENST00000556399 PRSS2P07478 247 aa12.1□□□□□ -0.47
ARHGEF40-207ENST00000556399 FRMD6-AS1P0C7T7 363 aa12.1□□□□□ -0.47
ARHGEF40-207ENST00000556399 SHANK2-AS3Q9BTD1 123 aa12.1□□□□□ -0.47
ARHGEF40-207ENST00000556399 SMAD7O15105 426 aaKnown RBP12.09□□□□□ -0.47
ARHGEF40-207ENST00000556399 FAM159AQ6UWV7 190 aa12.09□□□□□ -0.47
ARHGEF40-207ENST00000556399 WIPF2Q8TF74 440 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms