RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 IGHV1-69DA0A0B4J2H0 117 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 IGHV1-69P01742 117 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 GNLYP22749 145 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 Q0VFX4 171 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 TEX36Q5VZQ5 186 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 TRAV8-4A0A0B4J246 113 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 LY6DQ14210 128 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 CYTL1Q9NRR1 136 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 ANAPC10Q9UM13 185 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 KLF12Q9Y4X4 402 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 SIPA1L1O43166 1804 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 A0A1B0GUS0 222 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 C6orf226Q5I0X4 101 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 FAM19A2Q8N3H0 131 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 LIME1Q9H400 295 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 ZNF318Q5VUA4 2279 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 IGKV1D-8A0A087WSZ0 117 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 TRGV1A0A0A0MS02 117 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 GAGE13Q4V321 117 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 KLHL30-AS1Q8NEE0 82 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 GSN-AS1Q9NRJ2 163 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 LENEPQ9Y5L5 61 aa8.72□□□□□ -1.01
ACTN1-216ENST00000556083 TRAV2A0A0B4J234 112 aa8.71□□□□□ -1.01
ACTN1-216ENST00000556083 A6NNC1 897 aa8.71□□□□□ -1.01
ACTN1-216ENST00000556083 LINC01619G3V211 115 aa8.71□□□□□ -1.01
ACTN1-216ENST00000556083 H3BUT2 72 aa8.71□□□□□ -1.01
ACTN1-216ENST00000556083 SH2D1AO60880 128 aa8.71□□□□□ -1.01
ACTN1-216ENST00000556083 LYZL1Q6UWQ5 148 aa8.71□□□□□ -1.01
ACTN1-216ENST00000556083 SCRT1Q9BWW7 348 aa8.71□□□□□ -1.01
ACTN1-216ENST00000556083 WFDC1Q9HC57 220 aa8.71□□□□□ -1.01
ACTN1-216ENST00000556083 RTTNQ86VV8 2226 aa8.71□□□□□ -1.01
ACTN1-216ENST00000556083 C15orf62A8K5M9 175 aa8.71□□□□□ -1.01
ACTN1-216ENST00000556083 NSUN5P1Q3KNT7 163 aa8.71□□□□□ -1.01
ACTN1-216ENST00000556083 FAM231DQ6ZW35 169 aa8.71□□□□□ -1.01
ACTN1-216ENST00000556083 C3orf56Q8N813 242 aa8.71□□□□□ -1.01
ACTN1-216ENST00000556083 LCTP09848 1927 aa8.71□□□□□ -1.02
ACTN1-216ENST00000556083 SAA4P35542 130 aa8.71□□□□□ -1.02
ACTN1-216ENST00000556083 TMEM14BQ9NUH8 114 aa8.71□□□□□ -1.02
ACTN1-216ENST00000556083 MYOFQ9NZM1 2061 aa8.71□□□□□ -1.02
ACTN1-216ENST00000556083 IGHV2-70DA0A0C4DH43 119 aa8.71□□□□□ -1.02
ACTN1-216ENST00000556083 H3BMM0 161 aa8.71□□□□□ -1.02
ACTN1-216ENST00000556083 INAFM2P0DMQ5 153 aa8.71□□□□□ -1.02
ACTN1-216ENST00000556083 SPTBP11277 2137 aa8.71□□□□□ -1.02
ACTN1-216ENST00000556083 ZNF833PQ6ZTB9 187 aa8.71□□□□□ -1.02
ACTN1-216ENST00000556083 Q86TA4 180 aa8.71□□□□□ -1.02
ACTN1-216ENST00000556083 PDCD11Q14690 1871 aaKnown RBP8.7□□□□□ -1.02
ACTN1-216ENST00000556083 CACNA1IQ9P0X4 2223 aa8.7□□□□□ -1.02
ACTN1-216ENST00000556083 LYNX1G3V0Z9 82 aa8.7□□□□□ -1.02
ACTN1-216ENST00000556083 EREGO14944 169 aa8.7□□□□□ -1.02
ACTN1-216ENST00000556083 LYNX1P0DP58 116 aa8.7□□□□□ -1.02
ACTN1-216ENST00000556083 Q0VG73 95 aa8.7□□□□□ -1.02
ACTN1-216ENST00000556083 POU2AF1Q16633 256 aa8.7□□□□□ -1.02
ACTN1-216ENST00000556083 ACTL10Q5JWF8 245 aa8.7□□□□□ -1.02
ACTN1-216ENST00000556083 GLMPQ8WWB7 406 aa8.7□□□□□ -1.02
ACTN1-216ENST00000556083 MRPL53Q96EL3 112 aaKnown RBP8.7□□□□□ -1.02
ACTN1-216ENST00000556083 PRSS46E5RG02 174 aa8.7□□□□□ -1.02
ACTN1-216ENST00000556083 SPANXCQ9NY87 97 aa8.7□□□□□ -1.02
ACTN1-216ENST00000556083 D6R8Y8 96 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 E7EQL1 145 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 PAX4O43316 350 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 PSCAO43653 123 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 RNF152Q8N8N0 203 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 HIST1H2BLQ99880 126 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 ABCA7Q8IZY2 2146 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 TET1Q8NFU7 2136 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 IGLV3-9A0A075B6K5 115 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 LOC102724200A0A096LPH7 203 aaPredicted RBP8.69□□□□□ -1.02
ACTN1-216ENST00000556083 SAMD5Q5TGI4 173 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 LCNL1Q6ZST4 164 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 DLX4Q92988 240 aaPredicted RBP8.69□□□□□ -1.02
ACTN1-216ENST00000556083 IGLV1-44P01699 117 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 NBL1P41271 181 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 TMEM249Q2WGJ8 235 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 HIST3H2BBQ8N257 126 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 ATP6V0BQ99437 205 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 PFN1P07737 140 aaKnown RBP8.69□□□□□ -1.02
ACTN1-216ENST00000556083 PLA2G2CQ5R387 149 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 TIMM21Q9BVV7 248 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 BPESC1Q9GZL8 116 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 NDUFA4L2Q9NRX3 87 aa8.69□□□□□ -1.02
ACTN1-216ENST00000556083 TRBV20-1A0A075B6N2 111 aa8.68□□□□□ -1.02
ACTN1-216ENST00000556083 IGKV2-40A0A087WW87 121 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-216ENST00000556083 IGKV2D-40P01614 121 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-216ENST00000556083 HGFACQ04756 655 aa8.68□□□□□ -1.02
ACTN1-216ENST00000556083 SP5Q6BEB4 398 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-216ENST00000556083 NTF4P34130 210 aa8.68□□□□□ -1.02
ACTN1-216ENST00000556083 SIGMAR1Q99720 223 aa8.68□□□□□ -1.02
ACTN1-216ENST00000556083 IGHV3OR16-8A0A075B7F1 116 aa8.68□□□□□ -1.02
ACTN1-216ENST00000556083 C10orf55Q5SWW7 151 aa8.68□□□□□ -1.02
ACTN1-216ENST00000556083 NUP35Q8NFH5 326 aa8.68□□□□□ -1.02
ACTN1-216ENST00000556083 KIF26BQ2KJY2 2108 aa8.68□□□□□ -1.02
ACTN1-216ENST00000556083 TRBV25-1A0A075B6N4 114 aa8.68□□□□□ -1.02
ACTN1-216ENST00000556083 FOXG1P55316 489 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-216ENST00000556083 CD300EQ496F6 205 aaPredicted RBP8.68□□□□□ -1.02
ACTN1-216ENST00000556083 SH2D6Q7Z4S9 175 aa8.68□□□□□ -1.02
ACTN1-216ENST00000556083 ZNF329Q86UD4 541 aa8.68□□□□□ -1.02
ACTN1-216ENST00000556083 TMEM256Q8N2U0 113 aa8.68□□□□□ -1.02
ACTN1-216ENST00000556083 CITED1Q99966 193 aa8.68□□□□□ -1.02
ACTN1-216ENST00000556083 CSTL1Q9H114 145 aa8.68□□□□□ -1.02
ACTN1-216ENST00000556083 CRIM1Q9NZV1 1036 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms