RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 OR4X1Q8NH49 305 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 TVP23CQ96ET8 276 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 OR4F4Q96R69 305 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 PRR25Q96S07 402 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 RPS10P5Q9NQ39 176 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 SMCO4Q9NRQ5 59 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 TMEM167BQ9NRX6 74 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 PEMTQ9UBM1 199 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 PUS1Q9Y606 427 aaKnown RBP eCLIP5.35□□□□□ -1.55
SLIRP-204ENST00000555890 CSMD3Q7Z407 3707 aa5.35□□□□□ -1.55
SLIRP-204ENST00000555890 FRAS1Q86XX4 4008 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 IGKV1D-37A0A075B6S9 117 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 IGHV3OR16-10A0A075B7F0 116 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 TRAV30A0A087WSZ9 112 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 TRAV40A0A0B4J280 105 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 C7orf77A4D0Y5 90 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 ZNF727A8MUV8 499 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 B4DEV8 164 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 C11orf94C9JXX5 98 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 I3L2K1 104 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 DNASE2O00115 360 aaPredicted RBP5.34□□□□□ -1.55
SLIRP-204ENST00000555890 EIF3GO75821 320 aaKnown RBP eCLIP5.34□□□□□ -1.553e-6■□□□□ 9.7
SLIRP-204ENST00000555890 HLA-DRB1P01911 266 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 OR5G3P0C626 314 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 C8orf88P0DMB2 117 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 GATA2P23769 480 aaPredicted RBP5.34□□□□□ -1.55
SLIRP-204ENST00000555890 GCHFRP30047 84 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 MFAP4P55083 255 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 SSBP2P81877 361 aaPredicted RBP5.34□□□□□ -1.55
SLIRP-204ENST00000555890 PNRC1Q12796 327 aaPredicted RBP5.34□□□□□ -1.55
SLIRP-204ENST00000555890 AKIRIN2Q53H80 203 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 LCE4AQ5TA78 99 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 CST9LP1Q5W188 147 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 CYB5R2Q6BCY4 276 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 MIR17HGQ75NE6 70 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 Q8N9W7 124 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 TMEM68Q96MH6 324 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 UHRF2Q96PU4 802 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 HIF1ANQ9NWT6 349 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 PRELID1Q9Y255 219 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 ARL2-SNX15V9GYD0 113 aa5.34□□□□□ -1.55
SLIRP-204ENST00000555890 IGHV3-21A0A0B4J1V1 117 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 IGHV7-81A0A0B4J1V7 117 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 A0A0U1RQK1 487 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 FAM74A7A6NL05 159 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 NUPL2O15504 423 aaKnown RBP5.33□□□□□ -1.56
SLIRP-204ENST00000555890 OR7C2O60412 319 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 HYPMO75409 117 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 OR2C1O95371 312 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 IGHV3-48P01763 117 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 LINC00310P59036 64 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 CD81P60033 236 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 UBE2G2P60604 165 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 ZNF90Q03938 601 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 TMEM241Q24JQ0 296 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 SPATA31B1PQ5VZV4 182 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 UNQ5815/PRO19632Q6UWF5 114 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 BRD3OSQ6XYD6 125 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 S100A7AQ86SG5 101 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 STXBP6Q8NFX7 210 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 RBM14Q96PK6 669 aaKnown RBP5.33□□□□□ -1.56
SLIRP-204ENST00000555890 SSX3Q99909 188 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 SMIM7Q9BQ49 75 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 FAM103A1Q9BTL3 118 aaKnown RBP5.33□□□□□ -1.56
SLIRP-204ENST00000555890 C20orf24Q9BUV8 137 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 TUBA4BQ9H853 241 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 MRPL36Q9P0J6 103 aaKnown RBP5.33□□□□□ -1.56
SLIRP-204ENST00000555890 NAT8Q9UHE5 227 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 PITPNC1Q9UKF7 332 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 MOB4Q9Y3A3 225 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 MUC2Q02817 5179 aa5.33□□□□□ -1.56
SLIRP-204ENST00000555890 IGLV11-55A0A075B6I3 123 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 A0A087WWC5 75 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 K7EIM0 57 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 M0QZK8 103 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 GNG7O60262 68 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 TGFAP01135 160 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 PRB2P02812 416 aaPredicted RBP5.32□□□□□ -1.56
SLIRP-204ENST00000555890 IGLC1P0CG04 106 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 RD3LP0DJH9 198 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 IGHV4-38-2P0DP08 117 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 ORM2P19652 201 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 PLP1P60201 277 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 ZNF674Q2M3X9 581 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 TIGITQ495A1 244 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 ASPHD1Q5U4P2 390 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 KRTAP5-3Q6L8H2 238 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 C19orf35Q6ZS72 473 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 C16orf82Q7Z2V1 217 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 C5orf56Q8N8D9 126 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 C15orf54Q8N8G6 183 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 OR5T1Q8NG75 326 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 OR51G1Q8NGK1 321 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 OR1B1Q8NGR6 318 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 FAM110DQ8TAY7 271 aaPredicted RBP5.32□□□□□ -1.56
SLIRP-204ENST00000555890 Q8WTZ3 238 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 TMEM37Q8WXS4 190 aa5.32□□□□□ -1.56
SLIRP-204ENST00000555890 RPUSD4Q96CM3 377 aaKnown RBP5.32□□□□□ -1.56
SLIRP-204ENST00000555890 ZNF48Q96MX3 618 aaPredicted RBP5.32□□□□□ -1.56
SLIRP-204ENST00000555890 TXN2Q99757 166 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms