RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 TXN2Q99757 166 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 C16orf95Q9H693 158 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 SLC25A22Q9H936 323 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 THYN1Q9P016 225 aa4.83□□□□□ -1.64
LINC00643-203ENST00000555518 TRAV30A0A087WSZ9 112 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.82□□□□□ -1.64
LINC00643-203ENST00000555518 TRBV7-1A0A0A6YYK4 115 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 MAP1LC3B2A6NCE7 125 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 OR2T8A6NH00 312 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 NDUFA7O95182 113 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 OR2C1O95371 312 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 TOMM40O96008 361 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 MBP02144 154 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 CLEC3BP05452 202 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 STAG3L2P0CL84 134 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 STAG3L3P0CL85 134 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 PSG1P11464 419 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 GPR183P32249 361 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 CDC34P49427 236 aaPredicted RBP4.82□□□□□ -1.64
LINC00643-203ENST00000555518 TPPP2P59282 170 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 RAB14P61106 215 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 ATP5G2Q06055 141 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 ZNF616Q08AN1 781 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 RAB31Q13636 194 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 NDUFA5Q16718 116 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 Q56UQ5 140 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 ZNF343Q6P1L6 599 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 FAM122CQ6P4D5 195 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 LCN15Q6UWW0 184 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 RBMS3Q6XE24 437 aaKnown RBP4.82□□□□□ -1.64
LINC00643-203ENST00000555518 MIR17HGQ75NE6 70 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 COMMD7Q86VX2 200 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 EIF4E3Q8N5X7 224 aaKnown RBP4.82□□□□□ -1.64
LINC00643-203ENST00000555518 ZNF491Q8N8L2 437 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 ZNF418Q8TF45 676 aaPredicted RBP4.82□□□□□ -1.64
LINC00643-203ENST00000555518 GLMPQ8WWB7 406 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 EEF1AKMT3Q96AZ1 226 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 USMG5Q96IX5 58 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 FAM167A-AS1Q96KT0 104 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 MAP1LC3BQ9GZQ8 125 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 HRH4Q9H3N8 390 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 ZNF355PQ9NSJ1 428 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 MRPL27Q9P0M9 148 aaKnown RBP4.82□□□□□ -1.64
LINC00643-203ENST00000555518 FUT9Q9Y231 359 aa4.82□□□□□ -1.64
LINC00643-203ENST00000555518 A0A1B0GV50 99 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 CLPSL1A2RUU4 121 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 C9JQL5 133 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 PPP5D1E7EU14 171 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 BMPR1BO00238 502 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 TGOLN2O43493 480 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 GNG7O60262 68 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 ATP6V1G1O75348 118 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 IGHV3-11P01762 117 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 FGF8P55075 233 aaPredicted RBP4.81□□□□□ -1.64
LINC00643-203ENST00000555518 USF2Q15853 346 aaPredicted RBP4.81□□□□□ -1.64
LINC00643-203ENST00000555518 CLEC19AQ6UXS0 136 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 IL34Q6ZMJ4 242 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 NRACQ8N912 160 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 LINC01006Q8NI28 216 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 GATAD1Q8WUU5 269 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 SFT2D1Q8WV19 159 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 RNF125Q96EQ8 232 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 ELOVL1Q9BW60 279 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 SLC25A2Q9BXI2 301 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 MRPL32Q9BYC8 188 aaKnown RBP4.81□□□□□ -1.64
LINC00643-203ENST00000555518 ACTR3CQ9C0K3 210 aaPredicted RBP4.81□□□□□ -1.64
LINC00643-203ENST00000555518 GNB4Q9HAV0 340 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 DOK5Q9P104 306 aa4.81□□□□□ -1.64
LINC00643-203ENST00000555518 TRAV5A0A0B4J249 113 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 RAB19A4D1S5 217 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 H3BRN7 92 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 I3L521 148 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 MRPS12O15235 138 aaKnown RBP4.8□□□□□ -1.64
LINC00643-203ENST00000555518 HMGB3O15347 200 aaKnown RBP4.8□□□□□ -1.64
LINC00643-203ENST00000555518 COX7A2P2O60397 106 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 HYPMO75409 117 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 IL4P05112 153 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 RD3LP0DJH9 198 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 ARL14EPLP0DKL9 152 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 GP9P14770 177 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 RHOBP62745 196 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 FAM78BQ5VT40 261 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 C10orf113Q5VZT2 155 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 TEX38Q6PEX7 206 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 TOMM20LQ6UXN7 152 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 ZNF600Q6ZNG1 722 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 C18orf65Q6ZTR6 163 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 COMMD1Q8N668 190 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 KLHDC1Q8N7A1 406 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 OR4X2Q8NGF9 303 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 OR51G1Q8NGK1 321 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 SUN5Q8TC36 379 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 MARC2Q969Z3 335 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 C17orf77Q96MU5 243 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 FAM210AQ96ND0 272 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 UHRF2Q96PU4 802 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 SHANK2-AS3Q9BTD1 123 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 C19orf24Q9BVV8 132 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 DNAJC4Q9NNZ3 241 aa4.8□□□□□ -1.64
LINC00643-203ENST00000555518 GAR1Q9NY12 217 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms