RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 C8orf49Q96NF6 230 aa7.13□□□□□ -1.27
SYNE2-217ENST00000555022 COL6A6A6NMZ7 2263 aa7.13□□□□□ -1.27
SYNE2-217ENST00000555022 PPIAL4EA0A075B759 164 aa7.13□□□□□ -1.27
SYNE2-217ENST00000555022 TMEM265A0A087WTH1 108 aa7.13□□□□□ -1.27
SYNE2-217ENST00000555022 A1L4Q6 167 aa7.13□□□□□ -1.27
SYNE2-217ENST00000555022 PPIAL4FP0DN26 164 aa7.13□□□□□ -1.27
SYNE2-217ENST00000555022 TMPRSS3P57727 454 aa7.13□□□□□ -1.27
SYNE2-217ENST00000555022 NRN1LQ496H8 165 aa7.13□□□□□ -1.27
SYNE2-217ENST00000555022 KLF17Q5JT82 389 aaPredicted RBP7.13□□□□□ -1.27
SYNE2-217ENST00000555022 RBPMS2Q6ZRY4 209 aaKnown RBP7.13□□□□□ -1.27
SYNE2-217ENST00000555022 Q8TAT8 98 aa7.13□□□□□ -1.27
SYNE2-217ENST00000555022 DDB2Q92466 427 aa7.13□□□□□ -1.27
SYNE2-217ENST00000555022 HSPB8Q9UJY1 196 aa7.13□□□□□ -1.27
SYNE2-217ENST00000555022 IGHV1-18A0A0C4DH31 117 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 CIDEAO60543 219 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 TNFSF15O95150 251 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 FXYD2P54710 66 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 ATP5G2Q06055 141 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 KLF5Q13887 457 aaPredicted RBP7.12□□□□□ -1.27
SYNE2-217ENST00000555022 GTSCR1Q86UQ5 136 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 NEU4Q8WWR8 484 aaPredicted RBP7.12□□□□□ -1.27
SYNE2-217ENST00000555022 ARPC1AQ92747 370 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 SRSF8Q9BRL6 282 aaKnown RBP7.12□□□□□ -1.27
SYNE2-217ENST00000555022 TRGV8A0A0C4DH27 118 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 A0A1B0GXF2 115 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 OR2J3O76001 311 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 COX8AP10176 69 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 BCL6BQ8N143 479 aaPredicted RBP7.12□□□□□ -1.27
SYNE2-217ENST00000555022 IGHV3OR16-13A0A075B7E8 117 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 IGHV3-74A0A0B4J1X5 117 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 KBTBD11-OT1A0A1B0GTJ5 212 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 A0A1W2PNU3 283 aaPredicted RBP7.12□□□□□ -1.27
SYNE2-217ENST00000555022 KLRC4-KLRK1H3BQV0 150 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 CYC1P08574 325 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 GATA1P15976 413 aaPredicted RBP7.12□□□□□ -1.27
SYNE2-217ENST00000555022 WFDC2Q14508 124 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 WDR31Q8NA23 367 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 KLK15Q9H2R5 256 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 JKAMPQ9P055 326 aa7.12□□□□□ -1.27
SYNE2-217ENST00000555022 J3KRW8 73 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 TCRAP04437 139 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 TNFRSF1AP19438 455 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 INSL3P51460 131 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 ETDBQ3ZM63 59 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 ADAMTSL5Q6ZMM2 481 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 OR1L8Q8NGR8 309 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 SVIPQ8NHG7 77 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 ZNF747Q9BV97 191 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 COL25A1Q9BXS0 654 aaPredicted RBP7.11□□□□□ -1.27
SYNE2-217ENST00000555022 CHODLQ9H9P2 273 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 AGRNO00468 2067 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 IGKV1D-37A0A075B6S9 117 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 A6NDN8 102 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 PRSS1P07477 247 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 PLGLAQ15195 96 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 CCL17Q92583 94 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 IGKV2D-26A0A0A0MRZ7 120 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 A0A1W2PPI3 338 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 C9orf118A6NHY6 69 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 SRRM5B3KS81 715 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 K7EP34 96 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 FABP2P12104 132 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 COX7A1P24310 79 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 MBNL2Q5VZF2 373 aaKnown RBP7.11□□□□□ -1.27
SYNE2-217ENST00000555022 ZNF414Q96IQ9 312 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 MSRB1Q9NZV6 116 aa7.11□□□□□ -1.27
SYNE2-217ENST00000555022 BDP1A6H8Y1 2624 aa7.1□□□□□ -1.27
SYNE2-217ENST00000555022 A0A1B0GUT8 65 aa7.1□□□□□ -1.27
SYNE2-217ENST00000555022 TCRBV4S1A1TA0A5B7 111 aa7.1□□□□□ -1.27
SYNE2-217ENST00000555022 CGB1A6NKQ9 187 aa7.1□□□□□ -1.27
SYNE2-217ENST00000555022 CSN1S1P47710 185 aa7.1□□□□□ -1.27
SYNE2-217ENST00000555022 TNFAIP6P98066 277 aaPredicted RBP7.1□□□□□ -1.27
SYNE2-217ENST00000555022 SAMD5Q5TGI4 173 aa7.1□□□□□ -1.27
SYNE2-217ENST00000555022 PMS2CLQ68D20 193 aa7.1□□□□□ -1.27
SYNE2-217ENST00000555022 PET117Q6UWS5 81 aa7.1□□□□□ -1.27
SYNE2-217ENST00000555022 C19orf24Q9BVV8 132 aa7.1□□□□□ -1.27
SYNE2-217ENST00000555022 INSIG2Q9Y5U4 225 aa7.1□□□□□ -1.27
SYNE2-217ENST00000555022 G3V4G9 280 aa7.1□□□□□ -1.27
SYNE2-217ENST00000555022 H3BMG7 143 aa7.1□□□□□ -1.27
SYNE2-217ENST00000555022 LGALS7P47929 136 aa7.1□□□□□ -1.27
SYNE2-217ENST00000555022 C3orf36Q3SXR2 165 aa7.1□□□□□ -1.27
SYNE2-217ENST00000555022 PIP4P2Q8N4L2 257 aa7.1□□□□□ -1.27
SYNE2-217ENST00000555022 PRELID3AQ96N28 172 aa7.1□□□□□ -1.27
SYNE2-217ENST00000555022 NPFFR1Q9GZQ6 430 aa7.1□□□□□ -1.27
SYNE2-217ENST00000555022 SIGLEC8Q9NYZ4 499 aa7.1□□□□□ -1.27
SYNE2-217ENST00000555022 IGKV2-40A0A087WW87 121 aaPredicted RBP7.09□□□□□ -1.27
SYNE2-217ENST00000555022 NTN3O00634 580 aaPredicted RBP7.09□□□□□ -1.27
SYNE2-217ENST00000555022 IGKV2D-40P01614 121 aaPredicted RBP7.09□□□□□ -1.27
SYNE2-217ENST00000555022 CEACAM3P40198 252 aa7.09□□□□□ -1.27
SYNE2-217ENST00000555022 LYZL1Q6UWQ5 148 aa7.09□□□□□ -1.27
SYNE2-217ENST00000555022 Q86TA4 180 aa7.09□□□□□ -1.27
SYNE2-217ENST00000555022 ZADH2Q8N4Q0 377 aa7.09□□□□□ -1.27
SYNE2-217ENST00000555022 C7orf69Q9H7B7 122 aa7.09□□□□□ -1.27
SYNE2-217ENST00000555022 TNRC18O15417 2968 aaPredicted RBP7.09□□□□□ -1.27
SYNE2-217ENST00000555022 KIR2DL2P43627 348 aaPredicted RBP7.09□□□□□ -1.27
SYNE2-217ENST00000555022 C2orf83Q53S99 150 aa7.09□□□□□ -1.27
SYNE2-217ENST00000555022 C22orf34Q6ZV56 151 aa7.09□□□□□ -1.27
SYNE2-217ENST00000555022 DEFB123Q8N688 67 aa7.09□□□□□ -1.27
SYNE2-217ENST00000555022 WIPF2Q8TF74 440 aaPredicted RBP7.09□□□□□ -1.27
SYNE2-217ENST00000555022 CHCHD1Q96BP2 118 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms