RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 SCRT1Q9BWW7 348 aa12.39□□□□□ -0.43
SPTLC2-203ENST00000554901 TRAV2A0A0B4J234 112 aa12.38□□□□□ -0.43
SPTLC2-203ENST00000554901 GALR1P47211 349 aa12.38□□□□□ -0.43
SPTLC2-203ENST00000554901 NKX2-5P52952 324 aaPredicted RBP12.38□□□□□ -0.43
SPTLC2-203ENST00000554901 PAFAH1B2P68402 229 aa12.38□□□□□ -0.43
SPTLC2-203ENST00000554901 SIGLEC15Q6ZMC9 328 aa12.38□□□□□ -0.43
SPTLC2-203ENST00000554901 SLC25A22Q9H936 323 aa12.38□□□□□ -0.43
SPTLC2-203ENST00000554901 FUT9Q9Y231 359 aa12.38□□□□□ -0.43
SPTLC2-203ENST00000554901 UMAD1C9J7I0 102 aa12.37□□□□□ -0.43
SPTLC2-203ENST00000554901 G3V4G9 280 aa12.37□□□□□ -0.43
SPTLC2-203ENST00000554901 MEOX2P50222 304 aa12.37□□□□□ -0.43
SPTLC2-203ENST00000554901 KPRPQ5T749 579 aaPredicted RBP12.37□□□□□ -0.43
SPTLC2-203ENST00000554901 BPIFA4PQ86YQ2 179 aa12.37□□□□□ -0.43
SPTLC2-203ENST00000554901 OR10G4Q8NGN3 311 aa12.37□□□□□ -0.43
SPTLC2-203ENST00000554901 OR10G9Q8NGN4 311 aa12.37□□□□□ -0.43
SPTLC2-203ENST00000554901 OR10G7Q8NGN6 311 aa12.37□□□□□ -0.43
SPTLC2-203ENST00000554901 FAM210AQ96ND0 272 aa12.37□□□□□ -0.43
SPTLC2-203ENST00000554901 SEPSECSQ9HD40 501 aaKnown RBP12.37□□□□□ -0.43
SPTLC2-203ENST00000554901 RFNGQ9Y644 331 aa12.37□□□□□ -0.43
SPTLC2-203ENST00000554901 A0A1W2PPV4 95 aa12.37□□□□□ -0.43
SPTLC2-203ENST00000554901 TMEM41BQ5BJD5 291 aa12.37□□□□□ -0.43
SPTLC2-203ENST00000554901 AKR1C8PQ5T2L2 129 aa12.37□□□□□ -0.43
SPTLC2-203ENST00000554901 SAMD13Q5VXD3 122 aa12.37□□□□□ -0.43
SPTLC2-203ENST00000554901 LEMD1Q68G75 181 aa12.37□□□□□ -0.43
SPTLC2-203ENST00000554901 NBEAL1Q6ZS30 2694 aa12.37□□□□□ -0.43
SPTLC2-203ENST00000554901 STXBP6Q8NFX7 210 aa12.37□□□□□ -0.43
SPTLC2-203ENST00000554901 OR4C46A6NHA9 309 aa12.36□□□□□ -0.43
SPTLC2-203ENST00000554901 TAS2R45P59539 299 aa12.36□□□□□ -0.43
SPTLC2-203ENST00000554901 RAB2AP61019 212 aa12.36□□□□□ -0.43
SPTLC2-203ENST00000554901 RPL11P62913 178 aaKnown RBP12.36□□□□□ -0.43
SPTLC2-203ENST00000554901 MORN5Q5VZ52 161 aa12.36□□□□□ -0.43
SPTLC2-203ENST00000554901 NRN1Q9NPD7 142 aa12.36□□□□□ -0.43
SPTLC2-203ENST00000554901 TMEM14CQ9P0S9 112 aa12.36□□□□□ -0.43
SPTLC2-203ENST00000554901 ZNF256Q9Y2P7 627 aaPredicted RBP12.36□□□□□ -0.43
SPTLC2-203ENST00000554901 IZUMO1RA6ND01 250 aa12.35□□□□□ -0.43
SPTLC2-203ENST00000554901 ZNF785A8K8V0 405 aa12.35□□□□□ -0.43
SPTLC2-203ENST00000554901 BOLA2-SMG1P6H3BVE0 249 aa12.35□□□□□ -0.43
SPTLC2-203ENST00000554901 RPP25LQ8N5L8 163 aaKnown RBP12.35□□□□□ -0.43
SPTLC2-203ENST00000554901 PHYHIPLQ96FC7 376 aa12.35□□□□□ -0.43
SPTLC2-203ENST00000554901 RPRMQ9NS64 109 aa12.35□□□□□ -0.43
SPTLC2-203ENST00000554901 NOTCH1P46531 2555 aa12.34□□□□□ -0.43
SPTLC2-203ENST00000554901 A0A087X0K7 114 aa12.34□□□□□ -0.43
SPTLC2-203ENST00000554901 MRPS12O15235 138 aaKnown RBP12.34□□□□□ -0.43
SPTLC2-203ENST00000554901 GP9P14770 177 aa12.34□□□□□ -0.43
SPTLC2-203ENST00000554901 CDC34P49427 236 aaPredicted RBP12.34□□□□□ -0.43
SPTLC2-203ENST00000554901 GUCA2BQ16661 112 aa12.34□□□□□ -0.43
SPTLC2-203ENST00000554901 BEAN1Q3B7T3 259 aa12.34□□□□□ -0.43
SPTLC2-203ENST00000554901 KHDC3LQ587J8 217 aa12.34□□□□□ -0.43
SPTLC2-203ENST00000554901 MIR17HGQ75NE6 70 aa12.34□□□□□ -0.43
SPTLC2-203ENST00000554901 ACTR3CQ9C0K3 210 aaPredicted RBP12.34□□□□□ -0.43
SPTLC2-203ENST00000554901 MS4A6AQ9H2W1 248 aa12.34□□□□□ -0.43
SPTLC2-203ENST00000554901 DNASE2O00115 360 aaPredicted RBP12.33□□□□□ -0.44
SPTLC2-203ENST00000554901 ATF4P18848 351 aaPredicted RBP12.33□□□□□ -0.44
SPTLC2-203ENST00000554901 RAB5CP51148 216 aa12.33□□□□□ -0.44
SPTLC2-203ENST00000554901 CMC4P56277 68 aaPredicted RBP12.33□□□□□ -0.44
SPTLC2-203ENST00000554901 GUK1Q16774 197 aa12.33□□□□□ -0.44
SPTLC2-203ENST00000554901 SPATA31B1PQ5VZV4 182 aa12.33□□□□□ -0.44
SPTLC2-203ENST00000554901 DPPA3Q6W0C5 159 aa12.33□□□□□ -0.44
SPTLC2-203ENST00000554901 TMED6Q8WW62 240 aa12.33□□□□□ -0.44
SPTLC2-203ENST00000554901 FAM167A-AS1Q96KT0 104 aa12.33□□□□□ -0.44
SPTLC2-203ENST00000554901 FAM110AQ9BQ89 295 aa12.33□□□□□ -0.44
SPTLC2-203ENST00000554901 SMAD5-AS1Q9Y6J3 95 aa12.33□□□□□ -0.44
SPTLC2-203ENST00000554901 SORL1Q92673 2214 aa12.33□□□□□ -0.44
SPTLC2-203ENST00000554901 TRAV5A0A0B4J249 113 aa12.32□□□□□ -0.44
SPTLC2-203ENST00000554901 FAM122CQ6P4D5 195 aa12.32□□□□□ -0.44
SPTLC2-203ENST00000554901 PQLC2Q6ZP29 291 aa12.32□□□□□ -0.44
SPTLC2-203ENST00000554901 DCANP1Q8TF63 244 aa12.32□□□□□ -0.44
SPTLC2-203ENST00000554901 SLC25A2Q9BXI2 301 aa12.32□□□□□ -0.44
SPTLC2-203ENST00000554901 HRH4Q9H3N8 390 aa12.32□□□□□ -0.44
SPTLC2-203ENST00000554901 SELENOKQ9Y6D0 94 aa12.32□□□□□ -0.44
SPTLC2-203ENST00000554901 K7EQG2 157 aa12.32□□□□□ -0.44
SPTLC2-203ENST00000554901 IGLC2P0DOY2 106 aa12.32□□□□□ -0.44
SPTLC2-203ENST00000554901 HIST1H1EP10412 219 aaKnown RBP12.32□□□□□ -0.44
SPTLC2-203ENST00000554901 RAB24Q969Q5 203 aa12.32□□□□□ -0.44
SPTLC2-203ENST00000554901 OR51M1Q9H341 326 aa12.32□□□□□ -0.44
SPTLC2-203ENST00000554901 BOLA1Q9Y3E2 137 aa12.32□□□□□ -0.44
SPTLC2-203ENST00000554901 CMYA5Q8N3K9 4069 aa12.31□□□□□ -0.44
SPTLC2-203ENST00000554901 IGKV3-7A0A075B6H7 116 aa12.31□□□□□ -0.44
SPTLC2-203ENST00000554901 CTXND1A0A1B0GTU2 59 aa12.31□□□□□ -0.44
SPTLC2-203ENST00000554901 ZNF253O75346 499 aa12.31□□□□□ -0.44
SPTLC2-203ENST00000554901 STAG3L2P0CL84 134 aa12.31□□□□□ -0.44
SPTLC2-203ENST00000554901 STAG3L3P0CL85 134 aa12.31□□□□□ -0.44
SPTLC2-203ENST00000554901 KRTAP10-11P60412 298 aa12.31□□□□□ -0.44
SPTLC2-203ENST00000554901 LCN15Q6UWW0 184 aa12.31□□□□□ -0.44
SPTLC2-203ENST00000554901 GTSCR1Q86UQ5 136 aa12.31□□□□□ -0.44
SPTLC2-203ENST00000554901 GBGT1Q8N5D6 347 aa12.31□□□□□ -0.44
SPTLC2-203ENST00000554901 ISLRO14498 428 aa12.3□□□□□ -0.44
SPTLC2-203ENST00000554901 OR7C2O60412 319 aa12.3□□□□□ -0.44
SPTLC2-203ENST00000554901 ID1P41134 155 aa12.3□□□□□ -0.44
SPTLC2-203ENST00000554901 PDE6HQ13956 83 aa12.3□□□□□ -0.44
SPTLC2-203ENST00000554901 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.3□□□□□ -0.44
SPTLC2-203ENST00000554901 PAXXQ9BUH6 204 aa12.3□□□□□ -0.44
SPTLC2-203ENST00000554901 CLEC5AQ9NY25 188 aa12.3□□□□□ -0.44
SPTLC2-203ENST00000554901 SOCS3O14543 225 aa12.29□□□□□ -0.44
SPTLC2-203ENST00000554901 TFPI2P48307 235 aa12.29□□□□□ -0.44
SPTLC2-203ENST00000554901 PSMB3P49720 205 aa12.29□□□□□ -0.44
SPTLC2-203ENST00000554901 SULT1A2P50226 295 aa12.29□□□□□ -0.44
SPTLC2-203ENST00000554901 SNRPD3P62318 126 aaKnown RBP12.29□□□□□ -0.44
SPTLC2-203ENST00000554901 RNF141Q8WVD5 230 aa12.29□□□□□ -0.44
SPTLC2-203ENST00000554901 C17orf77Q96MU5 243 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms