RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 ZNF586Q9NXT0 402 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 STX18Q9P2W9 335 aaKnown RBP0.79□□□□□ -2.28
PRPF39-208ENST00000554785 METTL1Q9UBP6 276 aaKnown RBP0.79□□□□□ -2.28
PRPF39-208ENST00000554785 FLVCR2Q9UPI3 526 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 AMMECR1Q9Y4X0 333 aaPredicted RBP0.79□□□□□ -2.28
PRPF39-208ENST00000554785 KLF12Q9Y4X4 402 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 MPC1Q9Y5U8 109 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 DNAH17Q9UFH2 4485 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 IGHV6-1A0A0B4J1U7 121 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 A0A0J9YY99 117 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 NBDYA0A0U1RRE5 68 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 TMEM269A0A1B0GVZ9 245 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 ZNF729A6NN14 1252 aaPredicted RBP0.79□□□□□ -2.28
PRPF39-208ENST00000554785 EVPLLA8MZ36 301 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 LY6LH3BQJ8 138 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 J3QRK9 145 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 J3QT63 122 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 M0R129 80 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 FFAR1O14842 300 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 LECT2O14960 151 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 UBDO15205 165 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 ENTPD6O75354 484 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 IGKV1-16P04430 117 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 PRM2P04554 102 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 REG1AP05451 166 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 CRYGCP07315 174 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 HTN1P15515 57 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 CBLN1P23435 193 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 GNRHRP30968 328 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 PPP1CCP36873 323 aaKnown RBP0.79□□□□□ -2.28
PRPF39-208ENST00000554785 GALR1P47211 349 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 LGALS7P47929 136 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 RPL14P50914 215 aaKnown RBP0.79□□□□□ -2.28
PRPF39-208ENST00000554785 TAS2R60P59551 318 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 DNAJB13P59910 316 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 DEFB1P60022 68 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 RBX1P62877 108 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 RHOGP84095 191 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 FXYD3Q14802 87 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 MAPRE2Q15555 327 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 TNXAQ16473 311 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 DEFB114Q30KQ6 69 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 C12orf74Q32Q52 190 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 LGALS9BQ3B8N2 356 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 PIGYQ3MUY2 71 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 RPL39P5Q59GN2 51 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 MORN3Q6PF18 240 aaPredicted RBP0.79□□□□□ -2.28
PRPF39-208ENST00000554785 CLEC19AQ6UXS0 136 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 ASCL4Q6XD76 172 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 YIPF7Q8N8F6 280 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 Q8NAQ8 132 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 OR1P1Q8NH06 330 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 OR52N1Q8NH53 320 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 ZFAND1Q8TCF1 268 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 MYOZ3Q8TDC0 251 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 HAVCR2Q8TDQ0 301 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 ARL11Q969Q4 196 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 BORCS8Q96FH0 119 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 ABHD14BQ96IU4 210 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 TSNAXQ99598 290 aaKnown RBP0.79□□□□□ -2.28
PRPF39-208ENST00000554785 BCL2L10Q9HD36 194 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 ARMC1Q9NVT9 282 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 RAB22AQ9UL26 194 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 ENPP4Q9Y6X5 453 aa0.79□□□□□ -2.28
PRPF39-208ENST00000554785 SSPOA2VEC9 5147 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 A0A096LPF7 62 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 IGKV1-6A0A0C4DH72 117 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 IGKV1-12A0A0C4DH73 117 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 TMEM213A2RRL7 107 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 KNCNA6PVL3 124 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 H3BQF6 201 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 AIPO00170 330 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 NDUFS5O43920 106 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 OR7C1O76099 320 aaPredicted RBP0.78□□□□□ -2.28
PRPF39-208ENST00000554785 OR2A4O95047 310 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 IGKV1-39P01597 117 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 IGKV1D-12P01611 117 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 HLA-DRB1P01911 266 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 RBP4P02753 201 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 IGLV7-43P04211 117 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 IGKV1D-39P04432 117 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 OR5AL1P0C617 328 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 STAG3L2P0CL84 134 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 SAA2P0DJI9 122 aaPredicted RBP0.78□□□□□ -2.28
PRPF39-208ENST00000554785 DEFB130BP0DP73 79 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 DEFB130AP0DP74 79 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 IDO1P14902 403 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 SPI1P17947 270 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 PSMB2P49721 201 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 BLVRAP53004 296 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 DEFB131AP59861 70 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 CXCR4P61073 352 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 HIST1H3AP68431 136 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 RUNX1Q01196 453 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 FLI1Q01543 452 aaPredicted RBP0.78□□□□□ -2.28
PRPF39-208ENST00000554785 IFFO1Q0D2I5 559 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 SP6Q3SY56 376 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 ACTL10Q5JWF8 245 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 HIST2H3PS2Q5TEC6 136 aa0.78□□□□□ -2.28
PRPF39-208ENST00000554785 EPGNQ6UW88 154 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms