RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 ZNF90Q03938 601 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 GAGE5Q13069 117 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 GAGE6Q13070 117 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 CATR1Q13166 79 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 WFDC2Q14508 124 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 MEF2DQ14814 521 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 TRAM1Q15629 374 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 TBCEQ15813 527 aaPredicted RBP2.11□□□□□ -2.07
SLIRP-202ENST00000553981 SPINK13Q1W4C9 94 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 TMEM41BQ5BJD5 291 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 SERTAD4-AS1Q5TG53 156 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 FAM78BQ5VT40 261 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 Q6ZQT7 251 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 SSX7Q7RTT5 188 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 LHFPL1Q86WI0 220 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 BAP18Q8IXM2 172 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 LINC00612Q8N6U2 182 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 OR11H7Q8NGC8 314 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 OR4D10Q8NGI6 311 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 OR51G1Q8NGK1 321 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 GPX8Q8TED1 209 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 VSIG2Q96IQ7 327 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 FAM210BQ96KR6 192 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 LINC00479Q96M42 142 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 CMTM3Q96MX0 182 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 CCDC90BQ9GZT6 254 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 Q9H3A6 140 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 RPS10P5Q9NQ39 176 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 EHFQ9NZC4 300 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 PRNDQ9UKY0 176 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 RFNGQ9Y644 331 aa2.11□□□□□ -2.07
SLIRP-202ENST00000553981 LPAP08519 4548 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 RNF213Q63HN8 5207 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 IGLV5-45A0A087WSX0 123 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 A0A087X002 238 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 A0A096LPF7 62 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 A0A0J9YY99 117 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 GAGE10A6NGK3 116 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 SMIM9A6NGZ8 99 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 F5H768 121 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 PDCD5O14737 125 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 MRPS12O15235 138 aaKnown RBP2.1□□□□□ -2.07
SLIRP-202ENST00000553981 IL4P05112 153 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 DEFB130BP0DP73 79 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 DEFB130AP0DP74 79 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 GATA2P23769 480 aaPredicted RBP2.1□□□□□ -2.07
SLIRP-202ENST00000553981 NPY1RP25929 384 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 RPL5P46777 297 aaKnown RBP2.1□□□□□ -2.07
SLIRP-202ENST00000553981 NPBWR1P48145 328 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 HSPA13P48723 471 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 RORCP51449 518 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 RND2P52198 227 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 TAS2R20P59543 309 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 DAD1P61803 113 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 AARDQ4LEZ3 155 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 TMEM69Q5SWH9 247 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 IDNKQ5T6J7 187 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 SIGLEC15Q6ZMC9 328 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 H2BFWTQ7Z2G1 175 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 HSD17B13Q7Z5P4 300 aaPredicted RBP2.1□□□□□ -2.07
SLIRP-202ENST00000553981 RNF182Q8N6D2 247 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 OR4B1Q8NGF8 309 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 TMEM230Q96A57 120 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 TMEM56Q96MV1 263 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 LINC00052Q96N35 136 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 METTL26Q96S19 204 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 OPRPNQ99935 248 aaPredicted RBP2.1□□□□□ -2.07
SLIRP-202ENST00000553981 GINS3Q9BRX5 216 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 UPK3BQ9BT76 320 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 SLC25A39Q9BZJ4 359 aaPredicted RBP2.1□□□□□ -2.07
SLIRP-202ENST00000553981 SCPEP1Q9HB40 452 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 NRN1Q9NPD7 142 aa2.1□□□□□ -2.07
SLIRP-202ENST00000553981 LRP2P98164 4655 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 TRAV26-1A0A087WT03 109 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 A0A087WTM6 91 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 LINC00854A0A1B0GVQ3 168 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 NDUFAF8A1L188 74 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 LRCOL1A6NCL2 159 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 PRSS46E5RG02 174 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 J3KRW8 73 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 ZNF701M0R085 212 aaPredicted RBP2.09□□□□□ -2.07
SLIRP-202ENST00000553981 CIDEAO60543 219 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 SNAPC5O75971 98 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 SNRPCP09234 159 aaKnown RBP2.09□□□□□ -2.07
SLIRP-202ENST00000553981 MT1HL1P0DM35 61 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 MYL9P24844 172 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 UCP1P25874 307 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 OR10J1P30954 320 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 OPRK1P41145 380 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 CNN1P51911 297 aaKnown RBP2.09□□□□□ -2.07
SLIRP-202ENST00000553981 YPEL3P61236 119 aaPredicted RBP2.09□□□□□ -2.07
SLIRP-202ENST00000553981 HERV-K104P61576 105 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 ERVK-16P61578 105 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 RPL24P83731 157 aaKnown RBP2.09□□□□□ -2.07
SLIRP-202ENST00000553981 ERHP84090 104 aaKnown RBP2.09□□□□□ -2.07
SLIRP-202ENST00000553981 PSG9Q00887 426 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 RRN3P1Q2M238 152 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 ZFP69Q49AA0 526 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 C2orf83Q53S99 150 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms