RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, human

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-208	ENST00000553846	TGFBR1	P36897	503 aa		6.09	□□□□□ -1.43
PRKCH-208	ENST00000553846	TRIM16L	Q309B1	348 aa		6.09	□□□□□ -1.43
PRKCH-208	ENST00000553846	TMED4	Q7Z7H5	227 aa		6.09	□□□□□ -1.43
PRKCH-208	ENST00000553846	THAP8	Q8NA92	274 aa		6.09	□□□□□ -1.43
PRKCH-208	ENST00000553846	OR8A1	Q8NGG7	326 aa		6.09	□□□□□ -1.43
PRKCH-208	ENST00000553846	OR4D5	Q8NGN0	318 aa		6.09	□□□□□ -1.43
PRKCH-208	ENST00000553846	NTN5	Q8WTR8	489 aa	Predicted RBP	6.09	□□□□□ -1.43
PRKCH-208	ENST00000553846	TRGV9	Q99603	122 aa		6.09	□□□□□ -1.43
PRKCH-208	ENST00000553846	LINC00467	Q9BRT7	94 aa		6.09	□□□□□ -1.43
PRKCH-208	ENST00000553846	LOC100506127	A0A0U1RQW1	187 aa		6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	GAGE12B	A1L429	117 aa		6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	ZFP92	A6NM28	416 aa		6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846		H7BYZ3	331 aa		6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	B3GALNT1	O75752	331 aa		6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	GAGE7	O76087	117 aa		6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	OXT	P01178	125 aa		6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	PLA2G1B	P04054	148 aa	Known RBP	6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	GAGE12F	P0CL80	117 aa		6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	GAGE12G	P0CL81	117 aa		6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	GAGE12I	P0CL82	117 aa		6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	PGAM2	P15259	253 aa		6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	GPX4	P36969	197 aa	Predicted RBP	6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	GALR1	P47211	349 aa		6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	DAZ2	Q13117	558 aa	Known RBP	6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	OR2F1	Q13607	317 aa		6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	MEF2D	Q14814	521 aa		6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	LCE2A	Q5TA79	106 aa	Predicted RBP	6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846		Q6ZTI0	123 aa		6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	SELENOH	Q8IZQ5	122 aa	Known RBP	6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	SAMD12	Q8N8I0	201 aa		6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	OR13C8	Q8NGS7	320 aa		6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	RBPMS	Q93062	196 aa	Known RBP	6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	IL22RA2	Q969J5	263 aa		6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	HSPB7	Q9UBY9	170 aa		6.08	□□□□□ -1.44
PRKCH-208	ENST00000553846	IGLV5-52	A0A0A0MRZ9	124 aa		6.07	□□□□□ -1.44
PRKCH-208	ENST00000553846	CEBPZOS	A8MTT3	80 aa		6.07	□□□□□ -1.44
PRKCH-208	ENST00000553846	SNRPGP15	A8MWD9	76 aa		6.07	□□□□□ -1.44
PRKCH-208	ENST00000553846	PRSS46	E5RG02	174 aa		6.07	□□□□□ -1.44
PRKCH-208	ENST00000553846	ADAP1	O75689	374 aa		6.07	□□□□□ -1.44
PRKCH-208	ENST00000553846	OR5AC1	P0C628	307 aa		6.07	□□□□□ -1.44
PRKCH-208	ENST00000553846	HTN1	P15515	57 aa		6.07	□□□□□ -1.44
PRKCH-208	ENST00000553846	CXCL3	P19876	107 aa		6.07	□□□□□ -1.44
PRKCH-208	ENST00000553846	CDKN1B	P46527	198 aa		6.07	□□□□□ -1.44
PRKCH-208	ENST00000553846	GFI1B	Q5VTD9	330 aa		6.07	□□□□□ -1.44
PRKCH-208	ENST00000553846	TMEM182	Q6ZP80	229 aa	Predicted RBP	6.07	□□□□□ -1.44
PRKCH-208	ENST00000553846	NOXA1	Q86UR1	476 aa		6.07	□□□□□ -1.44
PRKCH-208	ENST00000553846	OR4D10	Q8NGI6	311 aa		6.07	□□□□□ -1.44
PRKCH-208	ENST00000553846	OR1B1	Q8NGR6	318 aa		6.07	□□□□□ -1.44
PRKCH-208	ENST00000553846	C20orf144	Q9BQM9	153 aa		6.07	□□□□□ -1.44
PRKCH-208	ENST00000553846	MSRB1	Q9NZV6	116 aa		6.07	□□□□□ -1.44
PRKCH-208	ENST00000553846		U3KQ87	197 aa		6.07	□□□□□ -1.44
PRKCH-208	ENST00000553846		A0A087X0K7	114 aa		6.06	□□□□□ -1.44
PRKCH-208	ENST00000553846		K7EP13	123 aa		6.06	□□□□□ -1.44
PRKCH-208	ENST00000553846	MRPS12	O15235	138 aa	Known RBP	6.06	□□□□□ -1.44
PRKCH-208	ENST00000553846	RLN2	P04090	185 aa		6.06	□□□□□ -1.44
PRKCH-208	ENST00000553846	PRB4	P10163	310 aa	Predicted RBP	6.06	□□□□□ -1.44
PRKCH-208	ENST00000553846	RPS19	P39019	145 aa	Known RBP	6.06	□□□□□ -1.44
PRKCH-208	ENST00000553846	HIST1H1A	Q02539	215 aa	Predicted RBP	6.06	□□□□□ -1.44
PRKCH-208	ENST00000553846	LCE2C	Q5TA81	110 aa		6.06	□□□□□ -1.44
PRKCH-208	ENST00000553846	C11orf72	Q8NBR9	251 aa		6.06	□□□□□ -1.44
PRKCH-208	ENST00000553846	ZNF738	Q8NE65	137 aa		6.06	□□□□□ -1.44
PRKCH-208	ENST00000553846	GPR82	Q96P67	336 aa		6.06	□□□□□ -1.44
PRKCH-208	ENST00000553846	RTBDN	Q9BSG5	229 aa	Predicted RBP	6.06	□□□□□ -1.44
PRKCH-208	ENST00000553846	SLC25A22	Q9H936	323 aa		6.06	□□□□□ -1.44
PRKCH-208	ENST00000553846	RAB26	Q9ULW5	256 aa		6.06	□□□□□ -1.44
PRKCH-208	ENST00000553846	TMEM56-RWDD3	S4R434	201 aa		6.06	□□□□□ -1.44
PRKCH-208	ENST00000553846	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	6.05	□□□□□ -1.44
PRKCH-208	ENST00000553846		H3BRN7	92 aa		6.05	□□□□□ -1.44
PRKCH-208	ENST00000553846	CD3D	P04234	171 aa		6.05	□□□□□ -1.44
PRKCH-208	ENST00000553846	MT1HL1	P0DM35	61 aa		6.05	□□□□□ -1.44
PRKCH-208	ENST00000553846	NEDD8	Q15843	81 aa		6.05	□□□□□ -1.44
PRKCH-208	ENST00000553846	LYPD5	Q6UWN5	251 aa		6.05	□□□□□ -1.44
PRKCH-208	ENST00000553846	WFDC10B	Q8IUB3	73 aa		6.05	□□□□□ -1.44
PRKCH-208	ENST00000553846	CROCCP3	Q8IVE0	287 aa		6.05	□□□□□ -1.44
PRKCH-208	ENST00000553846	LGI3	Q8N145	548 aa		6.05	□□□□□ -1.44
PRKCH-208	ENST00000553846		Q8N814	137 aa		6.05	□□□□□ -1.44
PRKCH-208	ENST00000553846	CCDC71L	Q8N9Z2	235 aa		6.05	□□□□□ -1.44
PRKCH-208	ENST00000553846	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	6.05	□□□□□ -1.44
PRKCH-208	ENST00000553846	TERB2	Q8NHR7	220 aa		6.05	□□□□□ -1.44
PRKCH-208	ENST00000553846	DTD1	Q8TEA8	209 aa		6.05	□□□□□ -1.44
PRKCH-208	ENST00000553846	PPP1R14B	Q96C90	147 aa		6.05	□□□□□ -1.44
PRKCH-208	ENST00000553846	PARD6G	Q9BYG4	376 aa	Predicted RBP	6.05	□□□□□ -1.44
PRKCH-208	ENST00000553846	RBKS	Q9H477	322 aa		6.05	□□□□□ -1.44
PRKCH-208	ENST00000553846	NAA60	Q9H7X0	242 aa		6.05	□□□□□ -1.44
PRKCH-208	ENST00000553846	COPZ2	Q9P299	210 aa		6.05	□□□□□ -1.44
PRKCH-208	ENST00000553846	CRYM-AS1	A6NIL9	109 aa		6.04	□□□□□ -1.44
PRKCH-208	ENST00000553846	NPIPB6	E9PJ23	425 aa		6.04	□□□□□ -1.44
PRKCH-208	ENST00000553846	ZNF324	O75467	553 aa	Predicted RBP	6.04	□□□□□ -1.44
PRKCH-208	ENST00000553846	APOA1	P02647	267 aa		6.04	□□□□□ -1.44
PRKCH-208	ENST00000553846	FABP1	P07148	127 aa		6.04	□□□□□ -1.44
PRKCH-208	ENST00000553846	SULT1A3	P0DMM9	295 aa		6.04	□□□□□ -1.44
PRKCH-208	ENST00000553846	SULT1A4	P0DMN0	295 aa		6.04	□□□□□ -1.44
PRKCH-208	ENST00000553846	ZNF182	P17025	639 aa	Predicted RBP	6.04	□□□□□ -1.44
PRKCH-208	ENST00000553846	TBP	P20226	339 aa		6.04	□□□□□ -1.44
PRKCH-208	ENST00000553846	GATA2	P23769	480 aa	Predicted RBP	6.04	□□□□□ -1.44
PRKCH-208	ENST00000553846	ATP5I	P56385	69 aa	Predicted RBP	6.04	□□□□□ -1.44
PRKCH-208	ENST00000553846	PSG3	Q16557	428 aa		6.04	□□□□□ -1.44
PRKCH-208	ENST00000553846	RNASE10	Q5GAN6	216 aa	Known RBP	6.04	□□□□□ -1.44
PRKCH-208	ENST00000553846	TMEM268	Q5VZI3	342 aa		6.04	□□□□□ -1.44
PRKCH-208	ENST00000553846	SNX29P2	Q8IUI4	249 aa		6.04	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms