RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 NCKAP5O14513 1909 aa3.26□□□□□ -1.89
RDH11-204ENST00000553578 UNC13CQ8NB66 2214 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 FAM236DA0A1B0GTK5 79 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 FAM236CP0DP71 79 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 QRFPP83859 136 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 KLF17Q5JT82 389 aaPredicted RBP3.25□□□□□ -1.89
RDH11-204ENST00000553578 C1orf100Q5SVJ3 147 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 MRPL20Q9BYC9 149 aaKnown RBP3.25□□□□□ -1.89
RDH11-204ENST00000553578 KLF12Q9Y4X4 402 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 SPENQ96T58 3664 aaKnown RBP3.25□□□□□ -1.89
RDH11-204ENST00000553578 TRAV8-1A0A0A6YYK1 113 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 FAM236AA0A1B0GUQ0 79 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 FAM236BA0A1B0GV22 79 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 H3BVH4 76 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 H7C1H1 209 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 RENP00797 406 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 CRYAAP02489 173 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 DYNLT3P51808 116 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 MFAP2P55001 183 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 YPEL3P61236 119 aaPredicted RBP3.25□□□□□ -1.89
RDH11-204ENST00000553578 HERVK_113P63121 156 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 DEFB110Q30KQ9 67 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 OR10AC1Q8NH08 325 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 OTOSQ8NHW6 89 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 LINC01587Q99440 93 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 NHP2Q9NX24 153 aaKnown RBP3.25□□□□□ -1.89
RDH11-204ENST00000553578 TMEM14AQ9Y6G1 99 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 TRAV8-2A0A0B4J237 113 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 TRGV8A0A0C4DH27 118 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 TEX50A0A1B0GTY4 177 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 OOSP1A8MZH6 123 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 ZFAND5O76080 213 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 TACSTD2P09758 323 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 FCER1GP30273 86 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 SAA4P35542 130 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 DLX6P56179 175 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 GUSBP1Q15486 140 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 SP6Q3SY56 376 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 EBLN2Q6P2I7 272 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 SLC25A47Q6Q0C1 308 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 CRIP3Q6Q6R5 217 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 ZPLD1Q8TCW7 415 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 C20orf173Q96LM9 149 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 Q96M85 177 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 PRO0628Q9UI54 55 aa3.25□□□□□ -1.89
RDH11-204ENST00000553578 MCTS1Q9ULC4 181 aaKnown RBP3.25□□□□□ -1.89
RDH11-204ENST00000553578 PRR32B1ATL7 298 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 K7ERJ3 54 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 SSSCA1O60232 199 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 HLA-DRB1P01911 266 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 APOHP02749 345 aaPredicted RBP3.24□□□□□ -1.89
RDH11-204ENST00000553578 PSMB2P49721 201 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 OR4X2Q8NGF9 303 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 OR10J6PQ8NGY7 276 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 TMEM133Q9H2Q1 129 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 RPRMQ9NS64 109 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 IDI2-AS1Q9NZ38 188 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 RABAC1Q9UI14 185 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 KLK5Q9Y337 293 aaPredicted RBP3.24□□□□□ -1.89
RDH11-204ENST00000553578 RP1L1Q8IWN7 2480 aaPredicted RBP3.24□□□□□ -1.89
RDH11-204ENST00000553578 LEPROTL1O95214 131 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 CD59P13987 128 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 NMSQ5H8A3 153 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 GAGE2AQ6NT46 116 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 TMEM230Q96A57 120 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 DDIT4LQ96D03 193 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 MBD6Q96DN6 1003 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 FAM173AQ9BQD7 235 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 SLC25A39Q9BZJ4 359 aaPredicted RBP3.24□□□□□ -1.89
RDH11-204ENST00000553578 C21orf62Q9NYP8 219 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 SLC17A2O00624 439 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 CGAP01215 116 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 HLA-DOBP13765 273 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 NBL1P41271 181 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 NMUP48645 174 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 UBE2E1P51965 193 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 FBXW4P57775 412 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 RPL18Q07020 188 aaKnown RBP3.24□□□□□ -1.89
RDH11-204ENST00000553578 LY6DQ14210 128 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 EDDM3AQ14507 147 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 RTL8BQ17RB0 113 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 DEFB133Q30KQ1 61 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 APRG1Q8IVJ8 170 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 TMEM105Q8N8V8 129 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 PPDPFLQ8WWR9 84 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 RITA1Q96K30 269 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 SCRT2Q9NQ03 307 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 KCNIP2Q9NS61 270 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 LAMA1P25391 3075 aa3.24□□□□□ -1.89
RDH11-204ENST00000553578 SYS1-DBNDD2H3BUS1 97 aa3.23□□□□□ -1.89
RDH11-204ENST00000553578 CDX4O14627 284 aaPredicted RBP3.23□□□□□ -1.89
RDH11-204ENST00000553578 PITX3O75364 302 aa3.23□□□□□ -1.89
RDH11-204ENST00000553578 APCSP02743 223 aa3.23□□□□□ -1.89
RDH11-204ENST00000553578 COX8AP10176 69 aa3.23□□□□□ -1.89
RDH11-204ENST00000553578 SLC38A11Q08AI6 406 aa3.23□□□□□ -1.89
RDH11-204ENST00000553578 LAGE3Q14657 143 aa3.23□□□□□ -1.89
RDH11-204ENST00000553578 BEAN1Q3B7T3 259 aa3.23□□□□□ -1.89
RDH11-204ENST00000553578 GUSBP11Q6P575 273 aa3.23□□□□□ -1.89
RDH11-204ENST00000553578 AGMATQ9BSE5 352 aa3.23□□□□□ -1.89
RDH11-204ENST00000553578 CHCHD5Q9BSY4 110 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms