RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 LRTM2Q8N967 370 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 ZNF114Q8NC26 417 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 OR4C16Q8NGL9 310 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 NTN5Q8WTR8 489 aaPredicted RBP3.55□□□□□ -1.84
CKAP4-203ENST00000553039 NUDCD2Q8WVJ2 157 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 ZNF414Q96IQ9 312 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 ARHGAP5-AS1Q96IT6 56 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 OR10C1Q96KK4 312 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 PRRT1Q99946 306 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 MARVELD1Q9BSK0 173 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 PECRQ9BY49 303 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 C20orf85Q9H1P6 137 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 C12orf4Q9NQ89 552 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 PLEKHJ1Q9NW61 149 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 SCP2D1Q9UJQ7 156 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 GOLT1BQ9Y3E0 138 aa3.55□□□□□ -1.84
CKAP4-203ENST00000553039 YTHDF2Q9Y5A9 579 aaKnown RBP3.55□□□□□ -1.84
CKAP4-203ENST00000553039 TRAV6A0A075B6T7 132 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 IGHV3OR16-13A0A075B7E8 117 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 IGHV3-74A0A0B4J1X5 117 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 LYRM9A8MSI8 78 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 TRDCB7Z8K6 153 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 K7EQG2 157 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 CCSO14618 274 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 RS1O15537 224 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 NDUFB6O95139 128 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 GAS8-AS1O95177 125 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 NAPSAO96009 420 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 CD3DP04234 171 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 ATP5G1P05496 136 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 CTSGP08311 255 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 TRAPPC2P0DI81 140 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 TRAPPC2BP0DI82 140 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 NPPCP23582 126 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 DTYMKP23919 212 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 HLA-DMAP28067 261 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 ATP5G3P48201 142 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 TMEM50BP56557 158 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 ARPC4P59998 168 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 SNRPD3P62318 126 aaKnown RBP3.54□□□□□ -1.84
CKAP4-203ENST00000553039 RPL24P83731 157 aaKnown RBP3.54□□□□□ -1.84
CKAP4-203ENST00000553039 GAGE5Q13069 117 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 GAGE6Q13070 117 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 FAAP20Q6NZ36 180 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 DHRS11Q6UWP2 260 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 Q6ZRN7 208 aaPredicted RBP3.54□□□□□ -1.84
CKAP4-203ENST00000553039 TMEM17Q86X19 198 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 HOGA1Q86XE5 327 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 ARRDC1Q8N5I2 433 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 UBAC2Q8NBM4 344 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 BEST4Q8NFU0 473 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 OR51S1Q8NGJ8 323 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 OR5H2Q8NGV7 314 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 OR10J5Q8NHC4 309 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 TMEM167AQ8TBQ9 72 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 SCARB1Q8WTV0 552 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 NARS2Q96I59 477 aaKnown RBP3.54□□□□□ -1.84
CKAP4-203ENST00000553039 C20orf173Q96LM9 149 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 CMSS1Q9BQ75 279 aaKnown RBP3.54□□□□□ -1.84
CKAP4-203ENST00000553039 SLC25A21Q9BQT8 299 aaPredicted RBP3.54□□□□□ -1.84
CKAP4-203ENST00000553039 GINS4Q9BRT9 223 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 QTRT1Q9BXR0 403 aaKnown RBP3.54□□□□□ -1.84
CKAP4-203ENST00000553039 KRTAP1-5Q9BYS1 174 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 COMMD5Q9GZQ3 224 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 OR2D2Q9H210 308 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 VSIRQ9H7M9 311 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 OR1A1Q9P1Q5 309 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 AK3Q9UIJ7 227 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 ELF5Q9UKW6 265 aaPredicted RBP3.54□□□□□ -1.84
CKAP4-203ENST00000553039 ANAPC10Q9UM13 185 aa3.54□□□□□ -1.84
CKAP4-203ENST00000553039 CHTOPQ9Y3Y2 248 aaKnown RBP3.54□□□□□ -1.84
CKAP4-203ENST00000553039 FAT1Q14517 4588 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 C7orf66A4D0T2 115 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 E7EUB6 86 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 K7EP13 123 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 SLC22A5O76082 557 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 KBTBD11O94819 623 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 PMP2P02689 132 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 FCER2P06734 321 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 FCGR3AP08637 254 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 ZNF688P0C7X2 276 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 DEFB130BP0DP73 79 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 DEFB130AP0DP74 79 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 HLA-GP17693 338 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 HRH1P35367 487 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 RRAS2P62070 204 aaPredicted RBP3.53□□□□□ -1.84
CKAP4-203ENST00000553039 TSPAN5P62079 268 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 HAMPP81172 84 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 SRSF9Q13242 221 aaKnown RBP eCLIP3.53□□□□□ -1.84
CKAP4-203ENST00000553039 ESRGQ1W209 222 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 SCGB2B2Q4G0G5 96 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 THOC7Q6I9Y2 204 aaKnown RBP3.53□□□□□ -1.84
CKAP4-203ENST00000553039 C19orf35Q6ZS72 473 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 STXBP6Q8NFX7 210 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 OR5AP2Q8NGF4 316 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 OR4D10Q8NGI6 311 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 TMEM37Q8WXS4 190 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 GNPNAT1Q96EK6 184 aaPredicted RBP3.53□□□□□ -1.84
CKAP4-203ENST00000553039 SCGB3A2Q96PL1 93 aa3.53□□□□□ -1.84
CKAP4-203ENST00000553039 EHFQ9NZC4 300 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms