RNA–Protein interactions for RNA: ENST00000552346.1

USP15-218, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 655 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-218ENST00000552346 CARD19Q96LW7 228 aa2.07□□□□□ -2.08
USP15-218ENST00000552346 C6orf62Q9GZU0 229 aaPredicted RBP2.07□□□□□ -2.08
USP15-218ENST00000552346 ALPK2Q86TB3 2170 aa2.06□□□□□ -2.08
USP15-218ENST00000552346 BRS3P32247 399 aa2.06□□□□□ -2.08
USP15-218ENST00000552346 TMBIM6P55061 237 aa2.06□□□□□ -2.08
USP15-218ENST00000552346 KRTAP12-4P60329 112 aa2.06□□□□□ -2.08
USP15-218ENST00000552346 DEFB113Q30KQ7 82 aa2.06□□□□□ -2.08
USP15-218ENST00000552346 PHF5AQ7RTV0 110 aaKnown RBP2.06□□□□□ -2.08
USP15-218ENST00000552346 Q8N2B8 174 aa2.06□□□□□ -2.08
USP15-218ENST00000552346 C12orf29Q8N999 325 aa2.06□□□□□ -2.08
USP15-218ENST00000552346 SFT2D1Q8WV19 159 aa2.06□□□□□ -2.08
USP15-218ENST00000552346 EFCAB11Q9BUY7 163 aa2.06□□□□□ -2.08
USP15-218ENST00000552346 OR2H1Q9GZK4 316 aa2.06□□□□□ -2.08
USP15-218ENST00000552346 MYLKQ15746 1914 aa2.06□□□□□ -2.08
USP15-218ENST00000552346 SDK1Q7Z5N4 2213 aa2.06□□□□□ -2.08
USP15-218ENST00000552346 DIDO1Q9BTC0 2240 aaKnown RBP2.06□□□□□ -2.08
USP15-218ENST00000552346 INTS1Q8N201 2190 aaKnown RBP2.05□□□□□ -2.08
USP15-218ENST00000552346 ODAMA1E959 279 aa2.05□□□□□ -2.08
USP15-218ENST00000552346 MRPS14O60783 128 aaKnown RBP2.05□□□□□ -2.08
USP15-218ENST00000552346 HIST1H2BKO60814 126 aa2.05□□□□□ -2.08
USP15-218ENST00000552346 FAM107AO95990 144 aa2.05□□□□□ -2.08
USP15-218ENST00000552346 HIST1H2BJP06899 126 aa2.05□□□□□ -2.08
USP15-218ENST00000552346 ROMO1P60602 79 aa2.05□□□□□ -2.08
USP15-218ENST00000552346 TMEM128Q5BJH2 165 aa2.05□□□□□ -2.08
USP15-218ENST00000552346 SAMD13Q5VXD3 122 aa2.05□□□□□ -2.08
USP15-218ENST00000552346 THEM6Q8WUY1 208 aa2.05□□□□□ -2.08
USP15-218ENST00000552346 ISOC1Q96CN7 298 aa2.05□□□□□ -2.08
USP15-218ENST00000552346 BORCS8Q96FH0 119 aa2.05□□□□□ -2.08
USP15-218ENST00000552346 NAA38Q9BRA0 125 aaKnown RBP2.05□□□□□ -2.08
USP15-218ENST00000552346 LRTM1Q9HBL6 345 aa2.05□□□□□ -2.08
USP15-218ENST00000552346 TRAPPC8Q9Y2L5 1435 aa2.05□□□□□ -2.08
USP15-218ENST00000552346 ARHGEF11O15085 1522 aa2.05□□□□□ -2.08
USP15-218ENST00000552346 SORL1Q92673 2214 aa2.05□□□□□ -2.08
USP15-218ENST00000552346 DHFRP00374 187 aa2.04□□□□□ -2.08
USP15-218ENST00000552346 IFNA4P05014 189 aa2.04□□□□□ -2.08
USP15-218ENST00000552346 BCL2P10415 239 aa2.04□□□□□ -2.08
USP15-218ENST00000552346 S100GP29377 79 aa2.04□□□□□ -2.08
USP15-218ENST00000552346 FBN1P35555 2871 aaKnown RBP2.04□□□□□ -2.08
USP15-218ENST00000552346 RAB4BP61018 213 aa2.04□□□□□ -2.08
USP15-218ENST00000552346 MSMO1Q15800 293 aa2.04□□□□□ -2.08
USP15-218ENST00000552346 FRMPD1Q5SYB0 1578 aa2.04□□□□□ -2.08
USP15-218ENST00000552346 OR4C6Q8NH72 309 aa2.04□□□□□ -2.08
USP15-218ENST00000552346 GRPEL2Q8TAA5 225 aa2.04□□□□□ -2.08
USP15-218ENST00000552346 SKA2Q8WVK7 121 aaPredicted RBP2.04□□□□□ -2.08
USP15-218ENST00000552346 RETNLBQ9BQ08 111 aa2.04□□□□□ -2.08
USP15-218ENST00000552346 CYSTM1Q9H1C7 97 aa2.04□□□□□ -2.08
USP15-218ENST00000552346 OTORQ9NRC9 128 aa2.04□□□□□ -2.08
USP15-218ENST00000552346 MED9Q9NWA0 146 aa2.04□□□□□ -2.08
USP15-218ENST00000552346 LAMTOR2Q9Y2Q5 125 aa2.04□□□□□ -2.08
USP15-218ENST00000552346 RNF11Q9Y3C5 154 aa2.04□□□□□ -2.08
USP15-218ENST00000552346 MYO5AQ9Y4I1 1855 aaKnown RBP2.04□□□□□ -2.08
USP15-218ENST00000552346 ASB4Q9Y574 426 aa2.04□□□□□ -2.08
USP15-218ENST00000552346 LY96Q9Y6Y9 160 aa2.04□□□□□ -2.08
USP15-218ENST00000552346 MYOFQ9NZM1 2061 aa2.03□□□□□ -2.08
USP15-218ENST00000552346 H7BYZ3 331 aa2.03□□□□□ -2.08
USP15-218ENST00000552346 CST7O76096 145 aa2.03□□□□□ -2.08
USP15-218ENST00000552346 RPL35P42766 123 aaKnown RBP2.03□□□□□ -2.08
USP15-218ENST00000552346 HBBP68871 147 aa2.03□□□□□ -2.08
USP15-218ENST00000552346 PYDC1Q8WXC3 89 aa2.03□□□□□ -2.08
USP15-218ENST00000552346 ZNF714Q96N38 554 aa2.03□□□□□ -2.08
USP15-218ENST00000552346 KRTAP4-1Q9BYQ7 146 aa2.03□□□□□ -2.08
USP15-218ENST00000552346 CACYBPQ9HB71 228 aaKnown RBP2.03□□□□□ -2.08
USP15-218ENST00000552346 CEP192Q8TEP8 1941 aa2.03□□□□□ -2.08
USP15-218ENST00000552346 C17orf112F2Z3M2 114 aa2.02□□□□□ -2.09
USP15-218ENST00000552346 K7ERJ3 54 aa2.02□□□□□ -2.09
USP15-218ENST00000552346 POLR2HP52434 150 aaKnown RBP2.02□□□□□ -2.09
USP15-218ENST00000552346 SURF2Q15527 256 aaPredicted RBP2.02□□□□□ -2.09
USP15-218ENST00000552346 ST6GALNAC3Q8NDV1 305 aa2.02□□□□□ -2.09
USP15-218ENST00000552346 OR5D16Q8NGK9 328 aa2.02□□□□□ -2.09
USP15-218ENST00000552346 OR9Q1Q8NGQ5 310 aa2.02□□□□□ -2.09
USP15-218ENST00000552346 TMEM254Q8TBM7 123 aa2.02□□□□□ -2.09
USP15-218ENST00000552346 REG4Q9BYZ8 158 aa2.02□□□□□ -2.09
USP15-218ENST00000552346 C19orf12Q9NSK7 152 aa2.02□□□□□ -2.09
USP15-218ENST00000552346 GINS2Q9Y248 185 aa2.02□□□□□ -2.09
USP15-218ENST00000552346 HSPB11Q9Y547 144 aa2.02□□□□□ -2.09
USP15-218ENST00000552346 PLXNA4Q9HCM2 1894 aa2.02□□□□□ -2.09
USP15-218ENST00000552346 SCN3AQ9NY46 2000 aa2.01□□□□□ -2.09
USP15-218ENST00000552346 TNS3Q68CZ2 1445 aa2.01□□□□□ -2.09
USP15-218ENST00000552346 RTL9Q8NET4 1388 aa2.01□□□□□ -2.09
USP15-218ENST00000552346 GABARAPH6UMI1 98 aa2.01□□□□□ -2.09
USP15-218ENST00000552346 OR10J4P0C629 311 aa2.01□□□□□ -2.09
USP15-218ENST00000552346 KLRD1Q13241 179 aa2.01□□□□□ -2.09
USP15-218ENST00000552346 EIF3IQ13347 325 aaKnown RBP2.01□□□□□ -2.09
USP15-218ENST00000552346 C1orf137Q5JT78 98 aa2.01□□□□□ -2.09
USP15-218ENST00000552346 OR2T35Q8NGX2 323 aa2.01□□□□□ -2.09
USP15-218ENST00000552346 POP5Q969H6 163 aaKnown RBP2.01□□□□□ -2.09
USP15-218ENST00000552346 MED31Q9Y3C7 131 aa2.01□□□□□ -2.09
USP15-218ENST00000552346 IGLV1-51P01701 117 aa2□□□□□ -2.09
USP15-218ENST00000552346 S100A11P31949 105 aa2□□□□□ -2.09
USP15-218ENST00000552346 DSCR4P56555 118 aaPredicted RBP2□□□□□ -2.09
USP15-218ENST00000552346 UNQ6190/PRO20217Q6UXQ8 127 aa2□□□□□ -2.09
USP15-218ENST00000552346 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2□□□□□ -2.09
USP15-218ENST00000552346 NAT8BQ9UHF3 227 aa2□□□□□ -2.09
USP15-218ENST00000552346 CHCHD2Q9Y6H1 151 aaPredicted RBP2□□□□□ -2.09
USP15-218ENST00000552346 ARAP1Q96P48 1450 aa2□□□□□ -2.09
USP15-218ENST00000552346 BCL9O00512 1426 aa2□□□□□ -2.09
USP15-218ENST00000552346 KDM6AO15550 1401 aaPredicted RBP2□□□□□ -2.09
USP15-218ENST00000552346 ARFGEF3Q5TH69 2177 aa1.99□□□□□ -2.09
USP15-218ENST00000552346 XIRP1Q702N8 1843 aaKnown RBP1.99□□□□□ -2.09
USP15-218ENST00000552346 B4DSR2 109 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms