RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 CST7O76096 145 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 FAM107AO95990 144 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 CST2P09228 141 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 HLA-EP13747 358 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 LSM6P62312 80 aaKnown RBP0.55□□□□□ -2.32
USP44-207ENST00000552237 DYNLT1P63172 113 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 PDE6HQ13956 83 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 HACD4Q5VWC8 232 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 DCUN1D2Q6PH85 259 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 HAGHLQ6PII5 290 aaPredicted RBP0.55□□□□□ -2.32
USP44-207ENST00000552237 SOSTDC1Q6X4U4 206 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 Q6ZQT0 140 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 GRINAQ7Z429 371 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 S100A7AQ86SG5 101 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 LRRC18Q8N456 261 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 STX19Q8N4C7 294 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 C3orf56Q8N813 242 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 PLPP5Q8NEB5 264 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 PXT1Q8NFP0 134 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 OR4B1Q8NGF8 309 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 GRPEL2Q8TAA5 225 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 DYDC1Q8WWB3 177 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 AP3S1Q92572 193 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 ISOC1Q96CN7 298 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 DGCR14Q96DF8 476 aaKnown RBP0.55□□□□□ -2.32
USP44-207ENST00000552237 CCDC94Q9BW85 323 aaPredicted RBP0.55□□□□□ -2.32
USP44-207ENST00000552237 POPDC3Q9HBV1 291 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 BIN3Q9NQY0 253 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 CDC42SE1Q9NRR8 79 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 ARMC1Q9NVT9 282 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 BOKQ9UMX3 212 aaPredicted RBP0.55□□□□□ -2.32
USP44-207ENST00000552237 LAMTOR2Q9Y2Q5 125 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 CASP8AP2Q9UKL3 1982 aa0.55□□□□□ -2.32
USP44-207ENST00000552237 VIRMAQ69YN4 1812 aaKnown RBP0.54□□□□□ -2.32
USP44-207ENST00000552237 NEO1Q92859 1461 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 RIMBP3CA6NJZ7 1639 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 RIMBP3BA6NNM3 1639 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 RIMBP3Q9UFD9 1639 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 PIK3C2AO00443 1686 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 TRAV10A0A0B4J240 114 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 TRAV3A0A0B4J244 114 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 TRAV5A0A0B4J249 113 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 TRAV4A0A0B4J268 109 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 A0A1W2PPM0 123 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 E7EQ34 232 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 BUB1B-PAK6H3BSN5 160 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 OR2T1O43869 369 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 HIST1H2BKO60814 126 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 SULT1C4O75897 302 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 CRHP06850 196 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 HIST1H2BJP06899 126 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 CTXN2P0C2S0 81 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 CXCL8P10145 99 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 COX7CP15954 63 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 DEFA3P59666 94 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 KLRD1Q13241 179 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 SNCBQ16143 134 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 C1orf137Q5JT78 98 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 C3orf33Q6P1S2 294 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 ALKAL1Q6UXT8 129 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 LINC00322Q6ZN03 302 aaPredicted RBP0.54□□□□□ -2.32
USP44-207ENST00000552237 PDZD9Q8IXQ8 264 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 FAM24BQ8N5W8 94 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 C5orf17Q8NAS9 161 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 OR10AG1Q8NH19 301 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 OR5AK2Q8NH90 309 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 ZNF418Q8TF45 676 aaPredicted RBP0.54□□□□□ -2.32
USP44-207ENST00000552237 SELENOSQ9BQE4 189 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 CCDC32Q9BV29 185 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 TMEM133Q9H2Q1 129 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 CACYBPQ9HB71 228 aaKnown RBP0.54□□□□□ -2.32
USP44-207ENST00000552237 IDI2-AS1Q9NZ38 188 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 MED11Q9P086 117 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 ATPIF1Q9UII2 106 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 PCTPQ9UKL6 214 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 PEAK1Q9H792 1746 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 TNRC6BQ9UPQ9 1833 aaKnown RBP0.54□□□□□ -2.32
USP44-207ENST00000552237 CACNA1BQ00975 2339 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 MIA2Q96PC5 1412 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 MCM3APO60318 1980 aa0.54□□□□□ -2.32
USP44-207ENST00000552237 SPAG17Q6Q759 2223 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 LAMB4A4D0S4 1761 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 SIP14410 1827 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 NUP210Q8TEM1 1887 aaPredicted RBP0.53□□□□□ -2.32
USP44-207ENST00000552237 TRAV27A0A087WT01 109 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 LOC110117498A0A087WWA1 95 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 IGHV1-58A0A0C4DH39 117 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 A0A1B0GV72 72 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 TRBV6-4A0A1B0GX49 114 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 hDV103S1A0JD37 113 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 TLCD2A6NGC4 264 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 BBIP1A8MTZ0 92 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 M0R2N4 97 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 PGRMC1O00264 195 aaKnown RBP0.53□□□□□ -2.32
USP44-207ENST00000552237 RER1O15258 196 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 LYZL6O75951 148 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 MT-ND6P03923 174 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 CD2P06729 351 aa0.53□□□□□ -2.32
USP44-207ENST00000552237 RNASE3P12724 160 aaKnown RBP0.53□□□□□ -2.32
USP44-207ENST00000552237 IDO1P14902 403 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms