RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 OR4X1Q8NH49 305 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 PHYHIPQ92561 330 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 GPR146Q96CH1 333 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 CMTM5Q96DZ9 223 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 RRNAD1Q96FB5 475 aaKnown RBP1.4□□□□□ -2.19
PTCH1-223ENST00000551623 PGLYRP3Q96LB9 341 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 TMEM56Q96MV1 263 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 DERL3Q96Q80 235 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 CMSS1Q9BQ75 279 aaKnown RBP1.4□□□□□ -2.19
PTCH1-223ENST00000551623 TMEM208Q9BTX3 173 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 HINT2Q9BX68 163 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 GABARAPL1Q9H0R8 117 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 CHMP1AQ9HD42 196 aaPredicted RBP1.4□□□□□ -2.19
PTCH1-223ENST00000551623 NOP10Q9NPE3 64 aaKnown RBP1.4□□□□□ -2.19
PTCH1-223ENST00000551623 RPRMQ9NS64 109 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 ARGLU1Q9NWB6 273 aaPredicted RBP1.4□□□□□ -2.19
PTCH1-223ENST00000551623 PRO0255Q9UI72 69 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 PRNDQ9UKY0 176 aa1.4□□□□□ -2.19
PTCH1-223ENST00000551623 RCL1Q9Y2P8 373 aaKnown RBP1.4□□□□□ -2.19
PTCH1-223ENST00000551623 TRAV8-3A0A0A6YYJ7 113 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 IGHV3-21A0A0B4J1V1 117 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 USP17L23D6RBM5 183 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 F6UB75 175 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 M0R2Z0 102 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 CORTO00230 105 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 DUSP14O95147 198 aaKnown RBP1.39□□□□□ -2.19
PTCH1-223ENST00000551623 RLN2P04090 185 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 CTXN2P0C2S0 81 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 GABRB1P18505 474 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 DTYMKP23919 212 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 UCP1P25874 307 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 ID1P41134 155 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 CNN1P51911 297 aaKnown RBP1.39□□□□□ -2.19
PTCH1-223ENST00000551623 GTF2A1P52655 376 aaPredicted RBP1.39□□□□□ -2.19
PTCH1-223ENST00000551623 CRYBA4P53673 196 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 DEFB1P60022 68 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 PRR3P79522 188 aaKnown RBP1.39□□□□□ -2.19
PTCH1-223ENST00000551623 DHODHQ02127 395 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 OR2F1Q13607 317 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 ZNF846Q147U1 533 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 SPINK13Q1W4C9 94 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 AARDQ4LEZ3 155 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 OR2B11Q5JQS5 317 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 EBLN2Q6P2I7 272 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 SFXN4Q6P4A7 337 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 SPINK6Q6UWN8 80 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 SDIM1Q6ZPB5 146 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 DHFR2Q86XF0 187 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 AQP12AQ8IXF9 295 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 BAP18Q8IXM2 172 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 C9orf163Q8N9P6 203 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 CCDC71LQ8N9Z2 235 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 C11orf72Q8NBR9 251 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 TCTEX1D2Q8WW35 142 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 TMEM203Q969S6 136 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 MOB3AQ96BX8 217 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 ATP6V1G3Q96LB4 118 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 TSC22D3Q99576 134 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 GINS4Q9BRT9 223 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 DCUN1D5Q9BTE7 237 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 URM1Q9BTM9 101 aaKnown RBP1.39□□□□□ -2.19
PTCH1-223ENST00000551623 PECRQ9BY49 303 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 MRPL32Q9BYC8 188 aaKnown RBP1.39□□□□□ -2.19
PTCH1-223ENST00000551623 HRASLSQ9HDD0 168 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 FGF20Q9NP95 211 aaPredicted RBP1.39□□□□□ -2.19
PTCH1-223ENST00000551623 FGFR1OP2Q9NVK5 253 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 FKBP11Q9NYL4 201 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 TAS2R8Q9NYW2 309 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 PLAC8Q9NZF1 115 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 PSORS1C2Q9UIG4 136 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 DAPK2Q9UIK4 370 aa1.39□□□□□ -2.19
PTCH1-223ENST00000551623 LPAP08519 4548 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.38□□□□□ -2.19
PTCH1-223ENST00000551623 IGKV1D-8A0A087WSZ0 117 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 RBFOX3A6NFN3 312 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 SNTNA6NMZ2 147 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 K7EQD1 137 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 SLC17A2O00624 439 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 SPINK4O60575 86 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 SCGB2A1O75556 95 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 LALBAP00709 142 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 ORM1P02763 201 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 OR5AC1P0C628 307 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 RNASE2P10153 161 aaKnown RBP1.38□□□□□ -2.19
PTCH1-223ENST00000551623 MAPK3P27361 379 aaPredicted RBP1.38□□□□□ -2.19
PTCH1-223ENST00000551623 CLDN12P56749 244 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 SUPT4H1P63272 117 aaKnown RBP1.38□□□□□ -2.19
PTCH1-223ENST00000551623 RPP30P78346 268 aaKnown RBP1.38□□□□□ -2.19
PTCH1-223ENST00000551623 MS4A2Q01362 244 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 CATR1Q13166 79 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 IBA57Q5T440 356 aaKnown RBP1.38□□□□□ -2.19
PTCH1-223ENST00000551623 Q6ZTI0 123 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 Q8N377 158 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 ZNF664Q8N3J9 261 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 THAP8Q8NA92 274 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 OR56B1Q8NGI3 324 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 OR1S2Q8NGQ3 325 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 ATP6V0E2Q8NHE4 81 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 COQ8AQ8NI60 647 aa1.38□□□□□ -2.19
PTCH1-223ENST00000551623 SETD6Q8TBK2 473 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms