RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 GCM1Q9NP62 436 aa16.96■□□□□ 0.31
NPAS3-210ENST00000551492 LSM4Q9Y4Z0 139 aaKnown RBP16.96■□□□□ 0.31
NPAS3-210ENST00000551492 COL8A1P27658 744 aa16.96■□□□□ 0.3
NPAS3-210ENST00000551492 MS4A6AQ9H2W1 248 aa16.96■□□□□ 0.3
NPAS3-210ENST00000551492 TRAV24A0A0B4J272 114 aa16.95■□□□□ 0.3
NPAS3-210ENST00000551492 GCSAMQ8N6F7 178 aa16.95■□□□□ 0.3
NPAS3-210ENST00000551492 ZNRF1Q8ND25 227 aa16.95■□□□□ 0.3
NPAS3-210ENST00000551492 CSPG4Q6UVK1 2322 aa16.95■□□□□ 0.3
NPAS3-210ENST00000551492 NDUFS7O75251 213 aa16.95■□□□□ 0.3
NPAS3-210ENST00000551492 PRB3Q04118 309 aaPredicted RBP16.95■□□□□ 0.3
NPAS3-210ENST00000551492 TRAT1Q6PIZ9 186 aa16.95■□□□□ 0.3
NPAS3-210ENST00000551492 A0A1W2PRD5 423 aa16.94■□□□□ 0.3
NPAS3-210ENST00000551492 A0A1W2PRF3 423 aa16.94■□□□□ 0.3
NPAS3-210ENST00000551492 A0A1W2PRM7 423 aa16.94■□□□□ 0.3
NPAS3-210ENST00000551492 DIAPH2-AS1Q14236 149 aa16.94■□□□□ 0.3
NPAS3-210ENST00000551492 EDDM3AQ14507 147 aa16.94■□□□□ 0.3
NPAS3-210ENST00000551492 MBNL2Q5VZF2 373 aaKnown RBP16.94■□□□□ 0.3
NPAS3-210ENST00000551492 SSBP3Q9BWW4 388 aaPredicted RBP16.94■□□□□ 0.3
NPAS3-210ENST00000551492 KCNS2Q9ULS6 477 aa16.94■□□□□ 0.3
NPAS3-210ENST00000551492 YTHDF2Q9Y5A9 579 aaKnown RBP16.94■□□□□ 0.3
NPAS3-210ENST00000551492 F8W1H4 67 aa16.94■□□□□ 0.3
NPAS3-210ENST00000551492 RRHO14718 337 aa16.94■□□□□ 0.3
NPAS3-210ENST00000551492 FOXA3P55318 350 aaPredicted RBP16.94■□□□□ 0.3
NPAS3-210ENST00000551492 TNFAIP6P98066 277 aaPredicted RBP16.94■□□□□ 0.3
NPAS3-210ENST00000551492 IL1F10Q8WWZ1 152 aa16.94■□□□□ 0.3
NPAS3-210ENST00000551492 J3QT63 122 aa16.93■□□□□ 0.3
NPAS3-210ENST00000551492 OR2H2O95918 312 aa16.93■□□□□ 0.3
NPAS3-210ENST00000551492 TIMM9Q9Y5J7 89 aa16.93■□□□□ 0.3
NPAS3-210ENST00000551492 F11RQ9Y624 299 aaKnown RBP16.93■□□□□ 0.3
NPAS3-210ENST00000551492 CD3EP07766 207 aa16.93■□□□□ 0.3
NPAS3-210ENST00000551492 FGF12P61328 243 aa16.93■□□□□ 0.3
NPAS3-210ENST00000551492 C3orf56Q8N813 242 aa16.93■□□□□ 0.3
NPAS3-210ENST00000551492 ZNF331Q9NQX6 463 aaPredicted RBP16.93■□□□□ 0.3
NPAS3-210ENST00000551492 ITPR2Q14571 2701 aa16.93■□□□□ 0.3
NPAS3-210ENST00000551492 SCTP09683 121 aa16.92■□□□□ 0.3
NPAS3-210ENST00000551492 ARL14EPLP0DKL9 152 aa16.92■□□□□ 0.3
NPAS3-210ENST00000551492 RFESDQ8TAC1 157 aa16.92■□□□□ 0.3
NPAS3-210ENST00000551492 FAM168AQ92567 244 aa16.92■□□□□ 0.3
NPAS3-210ENST00000551492 CXXC4Q9H2H0 198 aa16.92■□□□□ 0.3
NPAS3-210ENST00000551492 ANKRD17O75179 2603 aaKnown RBP16.92■□□□□ 0.3
NPAS3-210ENST00000551492 NAV2Q8IVL1 2488 aa16.92■□□□□ 0.3
NPAS3-210ENST00000551492 FABP5P3A8MUU1 101 aa16.92■□□□□ 0.3
NPAS3-210ENST00000551492 DEFB108AA8MXU0 73 aa16.92■□□□□ 0.3
NPAS3-210ENST00000551492 ZNF138P52744 262 aa16.92■□□□□ 0.3
NPAS3-210ENST00000551492 ZNF146Q15072 292 aa16.92■□□□□ 0.3
NPAS3-210ENST00000551492 NRGNQ92686 78 aa16.92■□□□□ 0.3
NPAS3-210ENST00000551492 NPCDR1Q9BY65 106 aa16.92■□□□□ 0.3
NPAS3-210ENST00000551492 SAP30LQ9HAJ7 183 aa16.92■□□□□ 0.3
NPAS3-210ENST00000551492 A0A1W2PRE2 83 aa16.91■□□□□ 0.3
NPAS3-210ENST00000551492 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.91■□□□□ 0.3
NPAS3-210ENST00000551492 DYNLRB1Q9NP97 96 aa16.91■□□□□ 0.3
NPAS3-210ENST00000551492 INSIG2Q9Y5U4 225 aa16.91■□□□□ 0.3
NPAS3-210ENST00000551492 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.91■□□□□ 0.3
NPAS3-210ENST00000551492 LRRC30A6NM36 301 aa16.91■□□□□ 0.3
NPAS3-210ENST00000551492 H0Y980 276 aa16.91■□□□□ 0.3
NPAS3-210ENST00000551492 PDCD6O75340 191 aa16.91■□□□□ 0.3
NPAS3-210ENST00000551492 SMIM13P0DJ93 91 aa16.91■□□□□ 0.3
NPAS3-210ENST00000551492 CAMPP49913 170 aa16.91■□□□□ 0.3
NPAS3-210ENST00000551492 Q6AWC8 147 aa16.91■□□□□ 0.3
NPAS3-210ENST00000551492 H1FXQ92522 213 aaKnown RBP16.91■□□□□ 0.3
NPAS3-210ENST00000551492 KIR2DL4Q99706 377 aa16.91■□□□□ 0.3
NPAS3-210ENST00000551492 GAGE12JA6NER3 117 aa16.9■□□□□ 0.3
NPAS3-210ENST00000551492 GAGE7O76087 117 aa16.9■□□□□ 0.3
NPAS3-210ENST00000551492 GAGE12FP0CL80 117 aa16.9■□□□□ 0.3
NPAS3-210ENST00000551492 GAGE12GP0CL81 117 aa16.9■□□□□ 0.3
NPAS3-210ENST00000551492 GAGE12IP0CL82 117 aa16.9■□□□□ 0.3
NPAS3-210ENST00000551492 EDDM3BP56851 147 aa16.9■□□□□ 0.3
NPAS3-210ENST00000551492 GAGE4Q13068 117 aa16.9■□□□□ 0.3
NPAS3-210ENST00000551492 UTF1Q5T230 341 aa16.9■□□□□ 0.3
NPAS3-210ENST00000551492 C1RLQ9NZP8 487 aa16.9■□□□□ 0.3
NPAS3-210ENST00000551492 CSDC2Q9Y534 153 aaKnown RBP16.9■□□□□ 0.3
NPAS3-210ENST00000551492 HIST2H2BCQ6DN03 193 aa16.9■□□□□ 0.3
NPAS3-210ENST00000551492 PQLC2Q6ZP29 291 aa16.9■□□□□ 0.3
NPAS3-210ENST00000551492 CD177Q8N6Q3 437 aa16.9■□□□□ 0.3
NPAS3-210ENST00000551492 DAZAP1Q96EP5 407 aaKnown RBP16.9■□□□□ 0.3
NPAS3-210ENST00000551492 VCX2Q9H322 139 aa16.9■□□□□ 0.3
NPAS3-210ENST00000551492 IGLV3-9A0A075B6K5 115 aa16.89■□□□□ 0.29
NPAS3-210ENST00000551492 NCR2O95944 276 aa16.89■□□□□ 0.29
NPAS3-210ENST00000551492 MOB1BQ7L9L4 216 aa16.89■□□□□ 0.29
NPAS3-210ENST00000551492 A0A1B0GWB2 263 aa16.89■□□□□ 0.29
NPAS3-210ENST00000551492 APOMO95445 188 aa16.89■□□□□ 0.29
NPAS3-210ENST00000551492 MFAP2P55001 183 aa16.89■□□□□ 0.29
NPAS3-210ENST00000551492 DLX1P56177 255 aa16.89■□□□□ 0.29
NPAS3-210ENST00000551492 FAM169BQ8N8A8 192 aa16.89■□□□□ 0.29
NPAS3-210ENST00000551492 GTSF1Q8WW33 167 aa16.89■□□□□ 0.29
NPAS3-210ENST00000551492 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.88■□□□□ 0.29
NPAS3-210ENST00000551492 FXYD2P54710 66 aa16.88■□□□□ 0.29
NPAS3-210ENST00000551492 CENPWQ5EE01 88 aa16.88■□□□□ 0.29
NPAS3-210ENST00000551492 MAP1LC3CQ9BXW4 147 aa16.88■□□□□ 0.29
NPAS3-210ENST00000551492 ABCA1O95477 2261 aa16.88■□□□□ 0.29
NPAS3-210ENST00000551492 GCSHP23434 173 aa16.88■□□□□ 0.29
NPAS3-210ENST00000551492 C5orf47Q569G3 176 aa16.88■□□□□ 0.29
NPAS3-210ENST00000551492 Q6P435 159 aa16.88■□□□□ 0.29
NPAS3-210ENST00000551492 CCL13Q99616 98 aa16.88■□□□□ 0.29
NPAS3-210ENST00000551492 RAI1Q7Z5J4 1906 aaPredicted RBP16.88■□□□□ 0.29
NPAS3-210ENST00000551492 TANC2Q9HCD6 1990 aa16.88■□□□□ 0.29
NPAS3-210ENST00000551492 IGHV3-43A0A0B4J1X8 118 aa16.88■□□□□ 0.29
NPAS3-210ENST00000551492 IGHV3-43DP0DP04 118 aa16.88■□□□□ 0.29
NPAS3-210ENST00000551492 KLF5Q13887 457 aaPredicted RBP16.88■□□□□ 0.29
NPAS3-210ENST00000551492 C8orf46Q8TAG6 207 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms