RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 PAXXQ9BUH6 204 aa7.95□□□□□ -1.14
NEK3-203ENST00000551355 ZNF747Q9BV97 191 aa7.95□□□□□ -1.14
NEK3-203ENST00000551355 SCRT1Q9BWW7 348 aa7.95□□□□□ -1.14
NEK3-203ENST00000551355 SLC25A2Q9BXI2 301 aa7.95□□□□□ -1.14
NEK3-203ENST00000551355 NKX6-2Q9C056 277 aaPredicted RBP7.95□□□□□ -1.14
NEK3-203ENST00000551355 MANBALQ9NQG1 85 aa7.95□□□□□ -1.14
NEK3-203ENST00000551355 SMPXQ9UHP9 88 aa7.95□□□□□ -1.14
NEK3-203ENST00000551355 RAB19A4D1S5 217 aa7.94□□□□□ -1.14
NEK3-203ENST00000551355 LINC00862A6NCI5 91 aa7.94□□□□□ -1.14
NEK3-203ENST00000551355 HELTA6NFD8 242 aa7.94□□□□□ -1.14
NEK3-203ENST00000551355 ADARB2-AS1A8MUL3 147 aa7.94□□□□□ -1.14
NEK3-203ENST00000551355 HIST1H1EP10412 219 aaKnown RBP7.94□□□□□ -1.14
NEK3-203ENST00000551355 GCHFRP30047 84 aa7.94□□□□□ -1.14
NEK3-203ENST00000551355 KRTAP10-3P60369 221 aa7.94□□□□□ -1.14
NEK3-203ENST00000551355 UBE2L3P68036 154 aaKnown RBP7.94□□□□□ -1.14
NEK3-203ENST00000551355 PDE6HQ13956 83 aa7.94□□□□□ -1.14
NEK3-203ENST00000551355 NSUN5P1Q3KNT7 163 aa7.94□□□□□ -1.14
NEK3-203ENST00000551355 SAMD13Q5VXD3 122 aa7.94□□□□□ -1.14
NEK3-203ENST00000551355 SPATA31B1PQ5VZV4 182 aa7.94□□□□□ -1.14
NEK3-203ENST00000551355 C16orf54Q6UWD8 224 aa7.94□□□□□ -1.14
NEK3-203ENST00000551355 SHISA2Q6UWI4 295 aa7.94□□□□□ -1.14
NEK3-203ENST00000551355 C12orf54Q6X4T0 127 aa7.94□□□□□ -1.14
NEK3-203ENST00000551355 SSX7Q7RTT5 188 aa7.94□□□□□ -1.14
NEK3-203ENST00000551355 C3orf56Q8N813 242 aa7.94□□□□□ -1.14
NEK3-203ENST00000551355 OR9G4Q8NGQ1 327 aa7.94□□□□□ -1.14
NEK3-203ENST00000551355 SUN5Q8TC36 379 aa7.94□□□□□ -1.14
NEK3-203ENST00000551355 SMDT1Q9H4I9 107 aa7.94□□□□□ -1.14
NEK3-203ENST00000551355 SIGLEC8Q9NYZ4 499 aa7.94□□□□□ -1.14
NEK3-203ENST00000551355 NIPBLQ6KC79 2804 aaeCLIP7.94□□□□□ -1.14
NEK3-203ENST00000551355 C2CD3Q4AC94 2353 aa7.93□□□□□ -1.14
NEK3-203ENST00000551355 CUBNO60494 3623 aa7.93□□□□□ -1.14
NEK3-203ENST00000551355 IGHV3OR16-8A0A075B7F1 116 aa7.93□□□□□ -1.14
NEK3-203ENST00000551355 TRAV5A0A0B4J249 113 aa7.93□□□□□ -1.14
NEK3-203ENST00000551355 TMEM213A2RRL7 107 aa7.93□□□□□ -1.14
NEK3-203ENST00000551355 HMGB3O15347 200 aaKnown RBP7.93□□□□□ -1.14
NEK3-203ENST00000551355 NDUFS6O75380 124 aaKnown RBP7.93□□□□□ -1.14
NEK3-203ENST00000551355 PF4P02776 101 aa7.93□□□□□ -1.14
NEK3-203ENST00000551355 GP9P14770 177 aa7.93□□□□□ -1.14
NEK3-203ENST00000551355 ATF4P18848 351 aaPredicted RBP7.93□□□□□ -1.14
NEK3-203ENST00000551355 SLURP1P55000 103 aa7.93□□□□□ -1.14
NEK3-203ENST00000551355 FGF8P55075 233 aaPredicted RBP7.93□□□□□ -1.14
NEK3-203ENST00000551355 TM4SF20Q53R12 229 aa7.93□□□□□ -1.14
NEK3-203ENST00000551355 MORN5Q5VZ52 161 aa7.93□□□□□ -1.14
NEK3-203ENST00000551355 IQCF2Q8IXL9 164 aa7.93□□□□□ -1.14
NEK3-203ENST00000551355 LYPD1Q8N2G4 141 aa7.93□□□□□ -1.14
NEK3-203ENST00000551355 DLX4Q92988 240 aaPredicted RBP7.93□□□□□ -1.14
NEK3-203ENST00000551355 RHPN1-AS1Q9BWJ2 59 aa7.93□□□□□ -1.14
NEK3-203ENST00000551355 NF1P21359 2839 aa7.93□□□□□ -1.14
NEK3-203ENST00000551355 A0A087X0K7 114 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 A0A1W2PRE2 83 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 C2orf70A6NJV1 201 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 OVOL1O14753 267 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 CHEK1O14757 476 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 ZNF207O43670 478 aaKnown RBP7.92□□□□□ -1.14
NEK3-203ENST00000551355 ZNF253O75346 499 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 NBEAP1P0C6P0 100 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 CBLN1P23435 193 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 PEA15Q15121 130 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 LEMD1Q68G75 181 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 UQCC3Q6UW78 93 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 SIGLEC15Q6ZMC9 328 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 PCNPQ8WW12 178 aaKnown RBP7.92□□□□□ -1.14
NEK3-203ENST00000551355 GLMPQ8WWB7 406 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 FXYD5Q96DB9 178 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 ZNF503Q96F45 646 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 FAM210AQ96ND0 272 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 TCEAL7Q9BRU2 100 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 CLEC5AQ9NY25 188 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 GNG13Q9P2W3 67 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 VAX2Q9UIW0 290 aa7.92□□□□□ -1.14
NEK3-203ENST00000551355 JMJD1CQ15652 2540 aa7.91□□□□□ -1.14
NEK3-203ENST00000551355 A0A1B0GV50 99 aa7.91□□□□□ -1.14
NEK3-203ENST00000551355 RBFOX3A6NFN3 312 aa7.91□□□□□ -1.14
NEK3-203ENST00000551355 ZNF785A8K8V0 405 aa7.91□□□□□ -1.14
NEK3-203ENST00000551355 MRPS12O15235 138 aaKnown RBP7.91□□□□□ -1.14
NEK3-203ENST00000551355 OR10J4P0C629 311 aa7.91□□□□□ -1.14
NEK3-203ENST00000551355 IGLC2P0DOY2 106 aa7.91□□□□□ -1.14
NEK3-203ENST00000551355 BCL2P10415 239 aa7.91□□□□□ -1.14
NEK3-203ENST00000551355 FOLR2P14207 255 aa7.91□□□□□ -1.14
NEK3-203ENST00000551355 CCL20P78556 96 aa7.91□□□□□ -1.14
NEK3-203ENST00000551355 PSG9Q00887 426 aa7.91□□□□□ -1.14
NEK3-203ENST00000551355 EIF4E3Q8N5X7 224 aaKnown RBP7.91□□□□□ -1.14
NEK3-203ENST00000551355 DUX3Q96PT4 197 aa7.91□□□□□ -1.14
NEK3-203ENST00000551355 EIF5A2Q9GZV4 153 aaKnown RBP7.91□□□□□ -1.14
NEK3-203ENST00000551355 TRBV19A0A075B6N1 114 aa7.9□□□□□ -1.14
NEK3-203ENST00000551355 APOHP02749 345 aaPredicted RBP7.9□□□□□ -1.14
NEK3-203ENST00000551355 PYYP10082 97 aa7.9□□□□□ -1.14
NEK3-203ENST00000551355 PAFAH1B2P68402 229 aa7.9□□□□□ -1.14
NEK3-203ENST00000551355 ZNF506Q5JVG8 444 aa7.9□□□□□ -1.14
NEK3-203ENST00000551355 COMMD7Q86VX2 200 aa7.9□□□□□ -1.14
NEK3-203ENST00000551355 ARL6IP6Q8N6S5 226 aa7.9□□□□□ -1.14
NEK3-203ENST00000551355 SLC50A1Q9BRV3 221 aa7.9□□□□□ -1.14
NEK3-203ENST00000551355 TMPRSS5Q9H3S3 457 aa7.9□□□□□ -1.14
NEK3-203ENST00000551355 TEP1Q99973 2627 aaKnown RBP7.9□□□□□ -1.15
NEK3-203ENST00000551355 IGHV3OR16-13A0A075B7E8 117 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 IGHV3-49A0A0A0MS15 119 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 IGHV3-74A0A0B4J1X5 117 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 TRAV25A0A0B4J276 109 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 IGHV3-66A0A0C4DH42 116 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 LOC102723971A0A1B0GUV8 181 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms