RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 SGK494Q96LW2 274 aa15.22■□□□□ 0.03
SSH1-209ENST00000551165 Q9H3A6 140 aa15.22■□□□□ 0.03
SSH1-209ENST00000551165 FAM223BA6NKX1 122 aa15.22■□□□□ 0.03
SSH1-209ENST00000551165 IGLV1-40P01703 118 aa15.22■□□□□ 0.03
SSH1-209ENST00000551165 IGLC2P0DOY2 106 aa15.22■□□□□ 0.03
SSH1-209ENST00000551165 HIST1H1EP10412 219 aaKnown RBP15.22■□□□□ 0.03
SSH1-209ENST00000551165 FAM223AQ8IWN6 122 aa15.22■□□□□ 0.03
SSH1-209ENST00000551165 RPH3ALQ9UNE2 315 aa15.22■□□□□ 0.03
SSH1-209ENST00000551165 TGIF2-C20orf24A0A0A6YYL0 155 aa15.21■□□□□ 0.03
SSH1-209ENST00000551165 SLC17A3O00476 420 aa15.21■□□□□ 0.03
SSH1-209ENST00000551165 BPIFA4PQ86YQ2 179 aa15.21■□□□□ 0.03
SSH1-209ENST00000551165 PRDM13Q9H4Q3 707 aa15.21■□□□□ 0.03
SSH1-209ENST00000551165 CLPSL1A2RUU4 121 aa15.21■□□□□ 0.03
SSH1-209ENST00000551165 ZNF207O43670 478 aaKnown RBP15.21■□□□□ 0.03
SSH1-209ENST00000551165 OR5I1Q13606 314 aa15.21■□□□□ 0.03
SSH1-209ENST00000551165 MYO9AB2RTY4 2548 aa15.21■□□□□ 0.03
SSH1-209ENST00000551165 PEX7O00628 323 aa15.2■□□□□ 0.02
SSH1-209ENST00000551165 SLC25A5P05141 298 aaKnown RBP15.2■□□□□ 0.02
SSH1-209ENST00000551165 RABAC1Q9UI14 185 aa15.2■□□□□ 0.02
SSH1-209ENST00000551165 IGHV3OR16-13A0A075B7E8 117 aa15.2■□□□□ 0.02
SSH1-209ENST00000551165 IGHV3-74A0A0B4J1X5 117 aa15.2■□□□□ 0.02
SSH1-209ENST00000551165 IGHV3-66A0A0C4DH42 116 aa15.2■□□□□ 0.02
SSH1-209ENST00000551165 CLDN34H7C241 214 aa15.2■□□□□ 0.02
SSH1-209ENST00000551165 MT-ND4LP03901 98 aa15.2■□□□□ 0.02
SSH1-209ENST00000551165 NHLRC2Q8NBF2 726 aa15.2■□□□□ 0.02
SSH1-209ENST00000551165 TMEM242Q9NWH2 141 aa15.2■□□□□ 0.02
SSH1-209ENST00000551165 EPDR1Q9UM22 224 aa15.2■□□□□ 0.02
SSH1-209ENST00000551165 TRBV19A0A075B6N1 114 aa15.19■□□□□ 0.02
SSH1-209ENST00000551165 IGHV3-49A0A0A0MS15 119 aa15.19■□□□□ 0.02
SSH1-209ENST00000551165 C9JCJ5 164 aa15.19■□□□□ 0.02
SSH1-209ENST00000551165 SCGB2A1O75556 95 aa15.19■□□□□ 0.02
SSH1-209ENST00000551165 APOHP02749 345 aaPredicted RBP15.19■□□□□ 0.02
SSH1-209ENST00000551165 IGF2BP2-AS1Q96M15 143 aa15.19■□□□□ 0.02
SSH1-209ENST00000551165 NOTCH2Q04721 2471 aa15.19■□□□□ 0.02
SSH1-209ENST00000551165 ISLRO14498 428 aa15.19■□□□□ 0.02
SSH1-209ENST00000551165 IGLV2-8P01709 118 aa15.19■□□□□ 0.02
SSH1-209ENST00000551165 GNG4P50150 75 aa15.19■□□□□ 0.02
SSH1-209ENST00000551165 RAB9AP51151 201 aa15.19■□□□□ 0.02
SSH1-209ENST00000551165 ZNF702PQ9H963 129 aa15.19■□□□□ 0.02
SSH1-209ENST00000551165 SMAD5-AS1Q9Y6J3 95 aa15.19■□□□□ 0.02
SSH1-209ENST00000551165 BMPR1BO00238 502 aa15.18■□□□□ 0.02
SSH1-209ENST00000551165 RAB5AP20339 215 aa15.18■□□□□ 0.02
SSH1-209ENST00000551165 OR4F17Q8NGA8 305 aa15.18■□□□□ 0.02
SSH1-209ENST00000551165 CXorf65A6NEN9 183 aa15.18■□□□□ 0.02
SSH1-209ENST00000551165 H7BYZ3 331 aa15.18■□□□□ 0.02
SSH1-209ENST00000551165 ARL3P36405 182 aa15.18■□□□□ 0.02
SSH1-209ENST00000551165 OR5B12Q96R08 314 aa15.18■□□□□ 0.02
SSH1-209ENST00000551165 CTDSP1Q9GZU7 261 aa15.18■□□□□ 0.02
SSH1-209ENST00000551165 GAR1Q9NY12 217 aaKnown RBP15.18■□□□□ 0.02
SSH1-209ENST00000551165 ANK3Q12955 4377 aaKnown RBP15.17■□□□□ 0.02
SSH1-209ENST00000551165 H3BUA1 57 aa15.17■□□□□ 0.02
SSH1-209ENST00000551165 BRI3O95415 125 aa15.17■□□□□ 0.02
SSH1-209ENST00000551165 SFRP2Q96HF1 295 aa15.17■□□□□ 0.02
SSH1-209ENST00000551165 UNQ9165/PRO28630Q6UXU0 137 aa15.17■□□□□ 0.02
SSH1-209ENST00000551165 SIGLEC15Q6ZMC9 328 aa15.17■□□□□ 0.02
SSH1-209ENST00000551165 ZFP82Q8N141 532 aa15.17■□□□□ 0.02
SSH1-209ENST00000551165 OR4X2Q8NGF9 303 aa15.17■□□□□ 0.02
SSH1-209ENST00000551165 TEX38Q6PEX7 206 aa15.16■□□□□ 0.02
SSH1-209ENST00000551165 Q71RC1 249 aaPredicted RBP15.16■□□□□ 0.02
SSH1-209ENST00000551165 OR8I2Q8N0Y5 310 aa15.16■□□□□ 0.02
SSH1-209ENST00000551165 USMG5Q96IX5 58 aa15.16■□□□□ 0.02
SSH1-209ENST00000551165 YAE1D1Q9NRH1 226 aa15.16■□□□□ 0.02
SSH1-209ENST00000551165 PFN1P07737 140 aaKnown RBP15.16■□□□□ 0.02
SSH1-209ENST00000551165 PSMB8P28062 276 aa15.16■□□□□ 0.02
SSH1-209ENST00000551165 IGHG4P01861 327 aa15.15■□□□□ 0.02
SSH1-209ENST00000551165 CNN1P51911 297 aaKnown RBP15.15■□□□□ 0.02
SSH1-209ENST00000551165 C5orf17Q8NAS9 161 aa15.15■□□□□ 0.02
SSH1-209ENST00000551165 SMR3AQ99954 134 aa15.15■□□□□ 0.02
SSH1-209ENST00000551165 PRSS22Q9GZN4 317 aa15.15■□□□□ 0.02
SSH1-209ENST00000551165 OTORQ9NRC9 128 aa15.15■□□□□ 0.02
SSH1-209ENST00000551165 CDC42EP3Q9UKI2 254 aa15.15■□□□□ 0.02
SSH1-209ENST00000551165 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.14■□□□□ 0.01
SSH1-209ENST00000551165 TRAV8-1A0A0A6YYK1 113 aa15.14■□□□□ 0.01
SSH1-209ENST00000551165 M0R3E3 92 aa15.14■□□□□ 0.01
SSH1-209ENST00000551165 BUB3O43684 328 aa15.14■□□□□ 0.01
SSH1-209ENST00000551165 TCRAP04437 139 aa15.14■□□□□ 0.01
SSH1-209ENST00000551165 SRP14P37108 136 aaKnown RBP15.14■□□□□ 0.01
SSH1-209ENST00000551165 GALR1P47211 349 aa15.14■□□□□ 0.01
SSH1-209ENST00000551165 IGFL4Q6B9Z1 124 aa15.14■□□□□ 0.01
SSH1-209ENST00000551165 ANAPC16Q96DE5 110 aa15.14■□□□□ 0.01
SSH1-209ENST00000551165 NF1P21359 2839 aa15.14■□□□□ 0.01
SSH1-209ENST00000551165 LOC105371267A0A1B0GV96 52 aa15.14■□□□□ 0.01
SSH1-209ENST00000551165 CD5LO43866 347 aa15.14■□□□□ 0.01
SSH1-209ENST00000551165 RELQ04864 619 aaPredicted RBP15.14■□□□□ 0.01
SSH1-209ENST00000551165 RNASE7Q9H1E1 156 aaKnown RBP15.14■□□□□ 0.01
SSH1-209ENST00000551165 ZNF580Q9UK33 172 aa15.14■□□□□ 0.01
SSH1-209ENST00000551165 OTOGQ6ZRI0 2925 aa15.14■□□□□ 0.01
SSH1-209ENST00000551165 ASCL2Q99929 193 aa15.13■□□□□ 0.01
SSH1-209ENST00000551165 ATG101Q9BSB4 218 aa15.13■□□□□ 0.01
SSH1-209ENST00000551165 LY96Q9Y6Y9 160 aa15.13■□□□□ 0.01
SSH1-209ENST00000551165 MGST1P10620 155 aaKnown RBP15.13■□□□□ 0.01
SSH1-209ENST00000551165 FAM3BP58499 235 aaPredicted RBP15.13■□□□□ 0.01
SSH1-209ENST00000551165 NPFFR1Q9GZQ6 430 aa15.13■□□□□ 0.01
SSH1-209ENST00000551165 PRELID1Q9Y255 219 aa15.13■□□□□ 0.01
SSH1-209ENST00000551165 RPLP1P05386 114 aaKnown RBP15.12■□□□□ 0.01
SSH1-209ENST00000551165 RPL7P18124 248 aaKnown RBP15.12■□□□□ 0.01
SSH1-209ENST00000551165 TAS2R60P59551 318 aa15.12■□□□□ 0.01
SSH1-209ENST00000551165 TMEM183BQ1AE95 376 aa15.12■□□□□ 0.01
SSH1-209ENST00000551165 S100A7AQ86SG5 101 aa15.12■□□□□ 0.01
SSH1-209ENST00000551165 BAGE2Q86Y30 109 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms