RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 MAP1LC3BQ9GZQ8 125 aa10.77□□□□□ -0.69
CACNB3-216ENST00000550391 DAZ1Q9NQZ3 744 aaKnown RBP10.77□□□□□ -0.69
CACNB3-216ENST00000550391 U3KQE9 123 aa10.77□□□□□ -0.69
CACNB3-216ENST00000550391 TRAV5A0A0B4J249 113 aa10.76□□□□□ -0.69
CACNB3-216ENST00000550391 EIF3GO75821 320 aaKnown RBP eCLIP10.76□□□□□ -0.69
CACNB3-216ENST00000550391 CXorf1O96002 111 aa10.76□□□□□ -0.69
CACNB3-216ENST00000550391 MYCNOSP40205 109 aa10.76□□□□□ -0.69
CACNB3-216ENST00000550391 STXBP6Q8NFX7 210 aa10.76□□□□□ -0.69
CACNB3-216ENST00000550391 LYPD6BQ8NI32 183 aa10.76□□□□□ -0.69
CACNB3-216ENST00000550391 FAM167A-AS1Q96KT0 104 aa10.76□□□□□ -0.69
CACNB3-216ENST00000550391 SLC25A2Q9BXI2 301 aa10.76□□□□□ -0.69
CACNB3-216ENST00000550391 HRH4Q9H3N8 390 aa10.76□□□□□ -0.69
CACNB3-216ENST00000550391 A0A1W2PS18 150 aa10.75□□□□□ -0.69
CACNB3-216ENST00000550391 A8MWP6 167 aa10.75□□□□□ -0.69
CACNB3-216ENST00000550391 ARL14EPLP0DKL9 152 aa10.75□□□□□ -0.69
CACNB3-216ENST00000550391 FGF8P55075 233 aaPredicted RBP10.75□□□□□ -0.69
CACNB3-216ENST00000550391 TM4SF20Q53R12 229 aa10.75□□□□□ -0.69
CACNB3-216ENST00000550391 C1orf194Q5T5A4 169 aa10.75□□□□□ -0.69
CACNB3-216ENST00000550391 LEMD1Q68G75 181 aa10.75□□□□□ -0.69
CACNB3-216ENST00000550391 SHISA2Q6UWI4 295 aa10.75□□□□□ -0.69
CACNB3-216ENST00000550391 PQLC2Q6ZP29 291 aa10.75□□□□□ -0.69
CACNB3-216ENST00000550391 ZNF747Q9BV97 191 aa10.75□□□□□ -0.69
CACNB3-216ENST00000550391 PEMTQ9UBM1 199 aa10.75□□□□□ -0.69
CACNB3-216ENST00000550391 CMYA5Q8N3K9 4069 aa10.75□□□□□ -0.69
CACNB3-216ENST00000550391 IGHV7-4-1A0A0J9YVY3 117 aa10.74□□□□□ -0.69
CACNB3-216ENST00000550391 A0A1B0GV50 99 aa10.74□□□□□ -0.69
CACNB3-216ENST00000550391 TMEM213A2RRL7 107 aa10.74□□□□□ -0.69
CACNB3-216ENST00000550391 BUB3O43684 328 aa10.74□□□□□ -0.69
CACNB3-216ENST00000550391 OR7C2O60412 319 aa10.74□□□□□ -0.69
CACNB3-216ENST00000550391 BMI1P35226 326 aa10.74□□□□□ -0.69
CACNB3-216ENST00000550391 OR8I2Q8N0Y5 310 aa10.74□□□□□ -0.69
CACNB3-216ENST00000550391 DLX4Q92988 240 aaPredicted RBP10.74□□□□□ -0.69
CACNB3-216ENST00000550391 MARC2Q969Z3 335 aa10.74□□□□□ -0.69
CACNB3-216ENST00000550391 GRAMD2BQ96HH9 432 aa10.74□□□□□ -0.69
CACNB3-216ENST00000550391 PAXXQ9BUH6 204 aa10.74□□□□□ -0.69
CACNB3-216ENST00000550391 OR51M1Q9H341 326 aa10.74□□□□□ -0.69
CACNB3-216ENST00000550391 TMEM231Q9H6L2 316 aa10.74□□□□□ -0.69
CACNB3-216ENST00000550391 TMEM14CQ9P0S9 112 aa10.74□□□□□ -0.69
CACNB3-216ENST00000550391 SMPXQ9UHP9 88 aa10.74□□□□□ -0.69
CACNB3-216ENST00000550391 VWFP04275 2813 aa10.73□□□□□ -0.69
CACNB3-216ENST00000550391 IGHV3-49A0A0A0MS15 119 aa10.73□□□□□ -0.69
CACNB3-216ENST00000550391 APOHP02749 345 aaPredicted RBP10.73□□□□□ -0.69
CACNB3-216ENST00000550391 RPL7P18124 248 aaKnown RBP10.73□□□□□ -0.69
CACNB3-216ENST00000550391 GCHFRP30047 84 aa10.73□□□□□ -0.69
CACNB3-216ENST00000550391 IL34Q6ZMJ4 242 aa10.73□□□□□ -0.69
CACNB3-216ENST00000550391 BPIFA4PQ86YQ2 179 aa10.73□□□□□ -0.69
CACNB3-216ENST00000550391 IQCF2Q8IXL9 164 aa10.73□□□□□ -0.69
CACNB3-216ENST00000550391 OR4F17Q8NGA8 305 aa10.73□□□□□ -0.69
CACNB3-216ENST00000550391 OR9G4Q8NGQ1 327 aa10.73□□□□□ -0.69
CACNB3-216ENST00000550391 ZNF503Q96F45 646 aa10.73□□□□□ -0.69
CACNB3-216ENST00000550391 GPR82Q96P67 336 aa10.73□□□□□ -0.69
CACNB3-216ENST00000550391 OR4F4Q96R69 305 aa10.73□□□□□ -0.69
CACNB3-216ENST00000550391 IGHV3-66A0A0C4DH42 116 aa10.72□□□□□ -0.69
CACNB3-216ENST00000550391 C2orf70A6NJV1 201 aa10.72□□□□□ -0.69
CACNB3-216ENST00000550391 CHEK1O14757 476 aa10.72□□□□□ -0.69
CACNB3-216ENST00000550391 PSMB3P49720 205 aa10.72□□□□□ -0.69
CACNB3-216ENST00000550391 PPT1P50897 306 aa10.72□□□□□ -0.69
CACNB3-216ENST00000550391 CCL20P78556 96 aa10.72□□□□□ -0.69
CACNB3-216ENST00000550391 C16orf54Q6UWD8 224 aa10.72□□□□□ -0.69
CACNB3-216ENST00000550391 RHPN1-AS1Q9BWJ2 59 aa10.72□□□□□ -0.69
CACNB3-216ENST00000550391 TMEM167BQ9NRX6 74 aa10.72□□□□□ -0.69
CACNB3-216ENST00000550391 IGHV3OR16-13A0A075B7E8 117 aa10.71□□□□□ -0.69
CACNB3-216ENST00000550391 IGHV3-74A0A0B4J1X5 117 aa10.71□□□□□ -0.69
CACNB3-216ENST00000550391 M0QZ24 198 aa10.71□□□□□ -0.69
CACNB3-216ENST00000550391 OVOL1O14753 267 aa10.71□□□□□ -0.69
CACNB3-216ENST00000550391 PF4P02776 101 aa10.71□□□□□ -0.69
CACNB3-216ENST00000550391 PYYP10082 97 aa10.71□□□□□ -0.69
CACNB3-216ENST00000550391 HIST1H1EP10412 219 aaKnown RBP10.71□□□□□ -0.69
CACNB3-216ENST00000550391 GP9P14770 177 aa10.71□□□□□ -0.69
CACNB3-216ENST00000550391 EDN2P20800 178 aa10.71□□□□□ -0.69
CACNB3-216ENST00000550391 CBLN1P23435 193 aa10.71□□□□□ -0.69
CACNB3-216ENST00000550391 GALR1P47211 349 aa10.71□□□□□ -0.69
CACNB3-216ENST00000550391 UBE2L3P68036 154 aaKnown RBP10.71□□□□□ -0.69
CACNB3-216ENST00000550391 SUN5Q8TC36 379 aa10.71□□□□□ -0.69
CACNB3-216ENST00000550391 GLMPQ8WWB7 406 aa10.71□□□□□ -0.69
CACNB3-216ENST00000550391 FXYD5Q96DB9 178 aa10.71□□□□□ -0.69
CACNB3-216ENST00000550391 ELOVL1Q9BW60 279 aa10.71□□□□□ -0.69
CACNB3-216ENST00000550391 TMPRSS5Q9H3S3 457 aa10.71□□□□□ -0.69
CACNB3-216ENST00000550391 LINC00862A6NCI5 91 aa10.7□□□□□ -0.7
CACNB3-216ENST00000550391 MRPS12O15235 138 aaKnown RBP10.7□□□□□ -0.7
CACNB3-216ENST00000550391 IFNA1P01562 189 aa10.7□□□□□ -0.7
CACNB3-216ENST00000550391 CSN3P07498 182 aa10.7□□□□□ -0.7
CACNB3-216ENST00000550391 OR10J4P0C629 311 aa10.7□□□□□ -0.7
CACNB3-216ENST00000550391 FOLR2P14207 255 aa10.7□□□□□ -0.7
CACNB3-216ENST00000550391 PMS2P11Q13670 270 aa10.7□□□□□ -0.7
CACNB3-216ENST00000550391 MED9Q9NWA0 146 aa10.7□□□□□ -0.7
CACNB3-216ENST00000550391 GNG13Q9P2W3 67 aa10.7□□□□□ -0.7
CACNB3-216ENST00000550391 HELTA6NFD8 242 aa10.69□□□□□ -0.7
CACNB3-216ENST00000550391 NBEAP1P0C6P0 100 aa10.69□□□□□ -0.7
CACNB3-216ENST00000550391 IGLC2P0DOY2 106 aa10.69□□□□□ -0.7
CACNB3-216ENST00000550391 ATF4P18848 351 aaPredicted RBP10.69□□□□□ -0.7
CACNB3-216ENST00000550391 GUK1Q16774 197 aa10.69□□□□□ -0.7
CACNB3-216ENST00000550391 SIGLEC15Q6ZMC9 328 aa10.69□□□□□ -0.7
CACNB3-216ENST00000550391 ADAMTSL5Q6ZMM2 481 aa10.69□□□□□ -0.7
CACNB3-216ENST00000550391 MANBALQ9NQG1 85 aa10.69□□□□□ -0.7
CACNB3-216ENST00000550391 ZNF785A8K8V0 405 aa10.68□□□□□ -0.7
CACNB3-216ENST00000550391 H3BQ15 152 aa10.68□□□□□ -0.7
CACNB3-216ENST00000550391 CD5P06127 495 aa10.68□□□□□ -0.7
CACNB3-216ENST00000550391 TAGLN2P37802 199 aaKnown RBP10.68□□□□□ -0.7
CACNB3-216ENST00000550391 LINC00482Q8N8I6 264 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms