RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 RNASE12Q5GAN4 147 aaKnown RBP7.21□□□□□ -1.26
VPS29-208ENST00000550267 IGFL4Q6B9Z1 124 aa7.21□□□□□ -1.26
VPS29-208ENST00000550267 GPR141Q7Z602 305 aa7.21□□□□□ -1.26
VPS29-208ENST00000550267 CROCCP3Q8IVE0 287 aa7.21□□□□□ -1.26
VPS29-208ENST00000550267 CCDC71LQ8N9Z2 235 aa7.21□□□□□ -1.26
VPS29-208ENST00000550267 RXFP4Q8TDU9 374 aa7.21□□□□□ -1.26
VPS29-208ENST00000550267 LINC01587Q99440 93 aa7.21□□□□□ -1.26
VPS29-208ENST00000550267 SLC25A39Q9BZJ4 359 aaPredicted RBP7.21□□□□□ -1.26
VPS29-208ENST00000550267 SLC25A32Q9H2D1 315 aa7.21□□□□□ -1.26
VPS29-208ENST00000550267 TIMM8BQ9Y5J9 83 aaPredicted RBP7.21□□□□□ -1.26
VPS29-208ENST00000550267 CDS2O95674 445 aa7.2□□□□□ -1.26
VPS29-208ENST00000550267 OR5AC1P0C628 307 aa7.2□□□□□ -1.26
VPS29-208ENST00000550267 HTN1P15515 57 aa7.2□□□□□ -1.26
VPS29-208ENST00000550267 M6PRP20645 277 aa7.2□□□□□ -1.26
VPS29-208ENST00000550267 HAMPP81172 84 aa7.2□□□□□ -1.26
VPS29-208ENST00000550267 GAMTQ14353 236 aa7.2□□□□□ -1.26
VPS29-208ENST00000550267 RNASE10Q5GAN6 216 aaKnown RBP7.2□□□□□ -1.26
VPS29-208ENST00000550267 SAMD13Q5VXD3 122 aa7.2□□□□□ -1.26
VPS29-208ENST00000550267 NOXA1Q86UR1 476 aa7.2□□□□□ -1.26
VPS29-208ENST00000550267 SELENOHQ8IZQ5 122 aaKnown RBP7.2□□□□□ -1.26
VPS29-208ENST00000550267 ARRDC1Q8N5I2 433 aa7.2□□□□□ -1.26
VPS29-208ENST00000550267 OR13C8Q8NGS7 320 aa7.2□□□□□ -1.26
VPS29-208ENST00000550267 GLYATL2Q8WU03 294 aa7.2□□□□□ -1.26
VPS29-208ENST00000550267 ZNF503Q96F45 646 aa7.2□□□□□ -1.26
VPS29-208ENST00000550267 C16orf74Q96GX8 76 aa7.2□□□□□ -1.26
VPS29-208ENST00000550267 RSG1Q9BU20 258 aa7.2□□□□□ -1.26
VPS29-208ENST00000550267 TMEM222Q9H0R3 208 aa7.2□□□□□ -1.26
VPS29-208ENST00000550267 VCX3BQ9H321 246 aa7.2□□□□□ -1.26
VPS29-208ENST00000550267 NOP10Q9NPE3 64 aaKnown RBP7.2□□□□□ -1.26
VPS29-208ENST00000550267 RAB26Q9ULW5 256 aa7.2□□□□□ -1.26
VPS29-208ENST00000550267 UBR4Q5T4S7 5183 aa7.2□□□□□ -1.26
VPS29-208ENST00000550267 SNRPGP15A8MWD9 76 aa7.19□□□□□ -1.26
VPS29-208ENST00000550267 BOLA2-SMG1P6H3BVE0 249 aa7.19□□□□□ -1.26
VPS29-208ENST00000550267 ZNF701M0R085 212 aaPredicted RBP7.19□□□□□ -1.26
VPS29-208ENST00000550267 CD3DP04234 171 aa7.19□□□□□ -1.26
VPS29-208ENST00000550267 GALR1P47211 349 aa7.19□□□□□ -1.26
VPS29-208ENST00000550267 TAS2R60P59551 318 aa7.19□□□□□ -1.26
VPS29-208ENST00000550267 ERVFC1-1P60608 527 aa7.19□□□□□ -1.26
VPS29-208ENST00000550267 NEDD8Q15843 81 aa7.19□□□□□ -1.26
VPS29-208ENST00000550267 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.19□□□□□ -1.26
VPS29-208ENST00000550267 RNF182Q8N6D2 247 aa7.19□□□□□ -1.26
VPS29-208ENST00000550267 ZFAND1Q8TCF1 268 aa7.19□□□□□ -1.26
VPS29-208ENST00000550267 MARCH1Q8TCQ1 289 aa7.19□□□□□ -1.26
VPS29-208ENST00000550267 RBPMSQ93062 196 aaKnown RBP7.19□□□□□ -1.26
VPS29-208ENST00000550267 SLC35E1Q96K37 410 aa7.19□□□□□ -1.26
VPS29-208ENST00000550267 SLC25A22Q9H936 323 aa7.19□□□□□ -1.26
VPS29-208ENST00000550267 COMMD3Q9UBI1 195 aa7.19□□□□□ -1.26
VPS29-208ENST00000550267 TRAV8-2A0A0B4J237 113 aa7.18□□□□□ -1.26
VPS29-208ENST00000550267 TEX13DA0A0J9YY54 714 aaPredicted RBP7.18□□□□□ -1.26
VPS29-208ENST00000550267 SMIM31A0A1B0GVY4 71 aa7.18□□□□□ -1.26
VPS29-208ENST00000550267 B3GALNT1O75752 331 aa7.18□□□□□ -1.26
VPS29-208ENST00000550267 IFNA5P01569 189 aa7.18□□□□□ -1.26
VPS29-208ENST00000550267 DNAH10OSP0CZ25 163 aa7.18□□□□□ -1.26
VPS29-208ENST00000550267 LSM3P62310 102 aaKnown RBP7.18□□□□□ -1.26
VPS29-208ENST00000550267 SCGB2B2Q4G0G5 96 aa7.18□□□□□ -1.26
VPS29-208ENST00000550267 TMEM268Q5VZI3 342 aa7.18□□□□□ -1.26
VPS29-208ENST00000550267 TMEM144Q7Z5S9 345 aa7.18□□□□□ -1.26
VPS29-208ENST00000550267 LGI3Q8N145 548 aa7.18□□□□□ -1.26
VPS29-208ENST00000550267 OR4D10Q8NGI6 311 aa7.18□□□□□ -1.26
VPS29-208ENST00000550267 OR10J6PQ8NGY7 276 aa7.18□□□□□ -1.26
VPS29-208ENST00000550267 RNASE8Q8TDE3 154 aaKnown RBP7.18□□□□□ -1.26
VPS29-208ENST00000550267 TNFRSF18Q9Y5U5 241 aa7.18□□□□□ -1.26
VPS29-208ENST00000550267 ZNF98A6NK75 572 aa7.17□□□□□ -1.26
VPS29-208ENST00000550267 GABARAPH6UMI1 98 aa7.17□□□□□ -1.26
VPS29-208ENST00000550267 GABARAPO95166 117 aa7.17□□□□□ -1.26
VPS29-208ENST00000550267 APOA1P02647 267 aa7.17□□□□□ -1.26
VPS29-208ENST00000550267 FABP1P07148 127 aa7.17□□□□□ -1.26
VPS29-208ENST00000550267 PRB4P10163 310 aaPredicted RBP7.17□□□□□ -1.26
VPS29-208ENST00000550267 ZNF182P17025 639 aaPredicted RBP7.17□□□□□ -1.26
VPS29-208ENST00000550267 GPX4P36969 197 aaPredicted RBP7.17□□□□□ -1.26
VPS29-208ENST00000550267 RHOBP62745 196 aa7.17□□□□□ -1.26
VPS29-208ENST00000550267 FGL1Q08830 312 aa7.17□□□□□ -1.26
VPS29-208ENST00000550267 Q6ZSN1 163 aa7.17□□□□□ -1.26
VPS29-208ENST00000550267 TMEM256Q8N2U0 113 aa7.17□□□□□ -1.26
VPS29-208ENST00000550267 LINC00612Q8N6U2 182 aa7.17□□□□□ -1.26
VPS29-208ENST00000550267 ZNF738Q8NE65 137 aa7.17□□□□□ -1.26
VPS29-208ENST00000550267 TERB2Q8NHR7 220 aa7.17□□□□□ -1.26
VPS29-208ENST00000550267 DTD1Q8TEA8 209 aa7.17□□□□□ -1.26
VPS29-208ENST00000550267 RBKSQ9H477 322 aa7.17□□□□□ -1.26
VPS29-208ENST00000550267 NAA60Q9H7X0 242 aa7.17□□□□□ -1.26
VPS29-208ENST00000550267 U3KQ87 197 aa7.17□□□□□ -1.26
VPS29-208ENST00000550267 IGKV1OR2-108A0A075B7D4 117 aa7.16□□□□□ -1.26
VPS29-208ENST00000550267 GAGE12BA1L429 117 aa7.16□□□□□ -1.26
VPS29-208ENST00000550267 H3BNG1 76 aa7.16□□□□□ -1.26
VPS29-208ENST00000550267 SIVA1O15304 175 aa7.16□□□□□ -1.26
VPS29-208ENST00000550267 HPGDSO60760 199 aa7.16□□□□□ -1.26
VPS29-208ENST00000550267 GAGE7O76087 117 aa7.16□□□□□ -1.26
VPS29-208ENST00000550267 TNFAIP8O95379 198 aa7.16□□□□□ -1.26
VPS29-208ENST00000550267 GAGE12FP0CL80 117 aa7.16□□□□□ -1.26
VPS29-208ENST00000550267 GAGE12GP0CL81 117 aa7.16□□□□□ -1.26
VPS29-208ENST00000550267 GAGE12IP0CL82 117 aa7.16□□□□□ -1.26
VPS29-208ENST00000550267 SULT1A3P0DMM9 295 aa7.16□□□□□ -1.26
VPS29-208ENST00000550267 SULT1A4P0DMN0 295 aa7.16□□□□□ -1.26
VPS29-208ENST00000550267 HIST1H1AQ02539 215 aaPredicted RBP7.16□□□□□ -1.26
VPS29-208ENST00000550267 ZNF493Q6ZR52 646 aa7.16□□□□□ -1.26
VPS29-208ENST00000550267 OR1B1Q8NGR6 318 aa7.16□□□□□ -1.26
VPS29-208ENST00000550267 OR52I2Q8NH67 350 aa7.16□□□□□ -1.26
VPS29-208ENST00000550267 TMEM263Q8WUH6 116 aaKnown RBP7.16□□□□□ -1.26
VPS29-208ENST00000550267 TRGV9Q99603 122 aa7.16□□□□□ -1.26
VPS29-208ENST00000550267 RTBDNQ9BSG5 229 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms