RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 ELOVL1Q9BW60 279 aa13.28□□□□□ -0.28
LETMD1-220ENST00000549686 OR51M1Q9H341 326 aa13.28□□□□□ -0.28
LETMD1-220ENST00000549686 MED9Q9NWA0 146 aa13.28□□□□□ -0.28
LETMD1-220ENST00000549686 TRAV5A0A0B4J249 113 aa13.27□□□□□ -0.29
LETMD1-220ENST00000549686 M0QZ24 198 aa13.27□□□□□ -0.29
LETMD1-220ENST00000549686 HMGB3O15347 200 aaKnown RBP13.27□□□□□ -0.29
LETMD1-220ENST00000549686 IFNA1P01562 189 aa13.27□□□□□ -0.29
LETMD1-220ENST00000549686 GCHFRP30047 84 aa13.27□□□□□ -0.29
LETMD1-220ENST00000549686 TAGLN2P37802 199 aaKnown RBP13.27□□□□□ -0.29
LETMD1-220ENST00000549686 MORN5Q5VZ52 161 aa13.27□□□□□ -0.29
LETMD1-220ENST00000549686 OR8I2Q8N0Y5 310 aa13.27□□□□□ -0.29
LETMD1-220ENST00000549686 SMPXQ9UHP9 88 aa13.27□□□□□ -0.29
LETMD1-220ENST00000549686 SETD2Q9BYW2 2564 aaPredicted RBP13.27□□□□□ -0.29
LETMD1-220ENST00000549686 TMEM213A2RRL7 107 aa13.26□□□□□ -0.29
LETMD1-220ENST00000549686 ZNF207O43670 478 aaKnown RBP13.26□□□□□ -0.29
LETMD1-220ENST00000549686 CD5P06127 495 aa13.26□□□□□ -0.29
LETMD1-220ENST00000549686 GALR1P47211 349 aa13.26□□□□□ -0.29
LETMD1-220ENST00000549686 MEOX2P50222 304 aa13.26□□□□□ -0.29
LETMD1-220ENST00000549686 FGF8P55075 233 aaPredicted RBP13.26□□□□□ -0.29
LETMD1-220ENST00000549686 UBE2L3P68036 154 aaKnown RBP13.26□□□□□ -0.29
LETMD1-220ENST00000549686 NDUFA5Q16718 116 aa13.26□□□□□ -0.29
LETMD1-220ENST00000549686 TM4SF20Q53R12 229 aa13.26□□□□□ -0.29
LETMD1-220ENST00000549686 C16orf54Q6UWD8 224 aa13.26□□□□□ -0.29
LETMD1-220ENST00000549686 C12orf54Q6X4T0 127 aa13.26□□□□□ -0.29
LETMD1-220ENST00000549686 OR9G4Q8NGQ1 327 aa13.26□□□□□ -0.29
LETMD1-220ENST00000549686 SUN5Q8TC36 379 aa13.26□□□□□ -0.29
LETMD1-220ENST00000549686 DUX3Q96PT4 197 aa13.26□□□□□ -0.29
LETMD1-220ENST00000549686 ARL2-SNX15V9GYD0 113 aa13.26□□□□□ -0.29
LETMD1-220ENST00000549686 LINC00862A6NCI5 91 aa13.25□□□□□ -0.29
LETMD1-220ENST00000549686 HIST1H1EP10412 219 aaKnown RBP13.25□□□□□ -0.29
LETMD1-220ENST00000549686 GP9P14770 177 aa13.25□□□□□ -0.29
LETMD1-220ENST00000549686 LEMD1Q68G75 181 aa13.25□□□□□ -0.29
LETMD1-220ENST00000549686 SHISA2Q6UWI4 295 aa13.25□□□□□ -0.29
LETMD1-220ENST00000549686 IQCF2Q8IXL9 164 aa13.25□□□□□ -0.29
LETMD1-220ENST00000549686 C3orf56Q8N813 242 aa13.25□□□□□ -0.29
LETMD1-220ENST00000549686 DLX4Q92988 240 aaPredicted RBP13.25□□□□□ -0.29
LETMD1-220ENST00000549686 RHPN1-AS1Q9BWJ2 59 aa13.25□□□□□ -0.29
LETMD1-220ENST00000549686 MANBALQ9NQG1 85 aa13.25□□□□□ -0.29
LETMD1-220ENST00000549686 A0A1B0GV50 99 aa13.24□□□□□ -0.29
LETMD1-220ENST00000549686 HELTA6NFD8 242 aa13.24□□□□□ -0.29
LETMD1-220ENST00000549686 C2orf70A6NJV1 201 aa13.24□□□□□ -0.29
LETMD1-220ENST00000549686 OVOL1O14753 267 aa13.24□□□□□ -0.29
LETMD1-220ENST00000549686 CHEK1O14757 476 aa13.24□□□□□ -0.29
LETMD1-220ENST00000549686 EIF3GO75821 320 aaKnown RBP eCLIP13.24□□□□□ -0.29
LETMD1-220ENST00000549686 PF4P02776 101 aa13.24□□□□□ -0.29
LETMD1-220ENST00000549686 GUK1Q16774 197 aa13.24□□□□□ -0.29
LETMD1-220ENST00000549686 HIST2H2BDQ6DRA6 164 aa13.24□□□□□ -0.29
LETMD1-220ENST00000549686 ZNF503Q96F45 646 aa13.24□□□□□ -0.29
LETMD1-220ENST00000549686 ATRQ13535 2644 aa13.24□□□□□ -0.29
LETMD1-220ENST00000549686 MRPS12O15235 138 aaKnown RBP13.23□□□□□ -0.29
LETMD1-220ENST00000549686 APOHP02749 345 aaPredicted RBP13.23□□□□□ -0.29
LETMD1-220ENST00000549686 IGLC2P0DOY2 106 aa13.23□□□□□ -0.29
LETMD1-220ENST00000549686 CBLN1P23435 193 aa13.23□□□□□ -0.29
LETMD1-220ENST00000549686 CCL20P78556 96 aa13.23□□□□□ -0.29
LETMD1-220ENST00000549686 GLMPQ8WWB7 406 aa13.23□□□□□ -0.29
LETMD1-220ENST00000549686 FXYD5Q96DB9 178 aa13.23□□□□□ -0.29
LETMD1-220ENST00000549686 TXNDC17Q9BRA2 123 aa13.23□□□□□ -0.29
LETMD1-220ENST00000549686 SIGLEC8Q9NYZ4 499 aa13.23□□□□□ -0.29
LETMD1-220ENST00000549686 A0A087X0K7 114 aa13.22□□□□□ -0.29
LETMD1-220ENST00000549686 RAB19A4D1S5 217 aa13.22□□□□□ -0.29
LETMD1-220ENST00000549686 OR10J4P0C629 311 aa13.22□□□□□ -0.29
LETMD1-220ENST00000549686 NBEAP1P0C6P0 100 aa13.22□□□□□ -0.29
LETMD1-220ENST00000549686 PYYP10082 97 aa13.22□□□□□ -0.29
LETMD1-220ENST00000549686 FOLR2P14207 255 aa13.22□□□□□ -0.29
LETMD1-220ENST00000549686 ATF4P18848 351 aaPredicted RBP13.22□□□□□ -0.29
LETMD1-220ENST00000549686 PDE6HQ13956 83 aa13.22□□□□□ -0.29
LETMD1-220ENST00000549686 SAMD13Q5VXD3 122 aa13.22□□□□□ -0.29
LETMD1-220ENST00000549686 SIGLEC15Q6ZMC9 328 aa13.22□□□□□ -0.29
LETMD1-220ENST00000549686 LURAP1LQ8IV03 231 aa13.22□□□□□ -0.29
LETMD1-220ENST00000549686 FAM210AQ96ND0 272 aa13.22□□□□□ -0.29
LETMD1-220ENST00000549686 NKX6-2Q9C056 277 aaPredicted RBP13.22□□□□□ -0.29
LETMD1-220ENST00000549686 GNG13Q9P2W3 67 aa13.22□□□□□ -0.29
LETMD1-220ENST00000549686 IGHV3-49A0A0A0MS15 119 aa13.21□□□□□ -0.29
LETMD1-220ENST00000549686 IGHV3-66A0A0C4DH42 116 aa13.21□□□□□ -0.29
LETMD1-220ENST00000549686 A0A1W2PRE2 83 aa13.21□□□□□ -0.29
LETMD1-220ENST00000549686 ZNF253O75346 499 aa13.21□□□□□ -0.29
LETMD1-220ENST00000549686 TMPRSS5Q9H3S3 457 aa13.21□□□□□ -0.29
LETMD1-220ENST00000549686 SMDT1Q9H4I9 107 aa13.21□□□□□ -0.29
LETMD1-220ENST00000549686 IGHV3OR16-13A0A075B7E8 117 aa13.2□□□□□ -0.3
LETMD1-220ENST00000549686 IGHV3-74A0A0B4J1X5 117 aa13.2□□□□□ -0.3
LETMD1-220ENST00000549686 ZNF785A8K8V0 405 aa13.2□□□□□ -0.3
LETMD1-220ENST00000549686 NDUFS6O75380 124 aaKnown RBP13.2□□□□□ -0.3
LETMD1-220ENST00000549686 CSN3P07498 182 aa13.2□□□□□ -0.3
LETMD1-220ENST00000549686 BCL2P10415 239 aa13.2□□□□□ -0.3
LETMD1-220ENST00000549686 LYPD1Q8N2G4 141 aa13.2□□□□□ -0.3
LETMD1-220ENST00000549686 TRBV19A0A075B6N1 114 aa13.19□□□□□ -0.3
LETMD1-220ENST00000549686 RBFOX3A6NFN3 312 aa13.19□□□□□ -0.3
LETMD1-220ENST00000549686 PSG9Q00887 426 aa13.19□□□□□ -0.3
LETMD1-220ENST00000549686 ZNF506Q5JVG8 444 aa13.19□□□□□ -0.3
LETMD1-220ENST00000549686 UQCC3Q6UW78 93 aa13.19□□□□□ -0.3
LETMD1-220ENST00000549686 COMMD7Q86VX2 200 aa13.19□□□□□ -0.3
LETMD1-220ENST00000549686 EIF4E3Q8N5X7 224 aaKnown RBP13.19□□□□□ -0.3
LETMD1-220ENST00000549686 LINC00482Q8N8I6 264 aa13.19□□□□□ -0.3
LETMD1-220ENST00000549686 ZNF586Q9NXT0 402 aa13.19□□□□□ -0.3
LETMD1-220ENST00000549686 VAX2Q9UIW0 290 aa13.19□□□□□ -0.3
LETMD1-220ENST00000549686 LOC102723971A0A1B0GUV8 181 aa13.18□□□□□ -0.3
LETMD1-220ENST00000549686 H3BQ15 152 aa13.18□□□□□ -0.3
LETMD1-220ENST00000549686 PEA15Q15121 130 aa13.18□□□□□ -0.3
LETMD1-220ENST00000549686 TCF24Q7RTU0 167 aa13.18□□□□□ -0.3
LETMD1-220ENST00000549686 DYNLRB2Q8TF09 96 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms