RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 C1QTNF4Q9BXJ3 329 aa8.73□□□□□ -1.01
DDX54-206ENST00000549271 WDR12Q9GZL7 423 aaKnown RBP8.73□□□□□ -1.01
DDX54-206ENST00000549271 PFDN2Q9UHV9 154 aa8.73□□□□□ -1.01
DDX54-206ENST00000549271 NACAE9PAV3 2078 aa8.73□□□□□ -1.01
DDX54-206ENST00000549271 IGLV2-18A0A075B6J9 118 aa8.72□□□□□ -1.01
DDX54-206ENST00000549271 C7orf66A4D0T2 115 aa8.72□□□□□ -1.01
DDX54-206ENST00000549271 SOCS3O14543 225 aa8.72□□□□□ -1.01
DDX54-206ENST00000549271 SCGB1D2O95969 90 aa8.72□□□□□ -1.01
DDX54-206ENST00000549271 METTL15P1P0C7V9 234 aa8.72□□□□□ -1.01
DDX54-206ENST00000549271 DLK1P80370 383 aa8.72□□□□□ -1.01
DDX54-206ENST00000549271 IFITM3Q01628 133 aa8.72□□□□□ -1.01
DDX54-206ENST00000549271 AKR1C1Q04828 323 aa8.72□□□□□ -1.01
DDX54-206ENST00000549271 ARL16Q0P5N6 197 aa8.72□□□□□ -1.01
DDX54-206ENST00000549271 ASAH1Q13510 395 aa8.72□□□□□ -1.01
DDX54-206ENST00000549271 C12orf45Q8N5I9 185 aaPredicted RBP8.72□□□□□ -1.01
DDX54-206ENST00000549271 C11orf1Q9H5F2 150 aa8.72□□□□□ -1.01
DDX54-206ENST00000549271 FAM240BA0A1B0GVZ2 78 aa8.71□□□□□ -1.02
DDX54-206ENST00000549271 ZNF98A6NK75 572 aa8.71□□□□□ -1.02
DDX54-206ENST00000549271 H3BMM0 161 aa8.71□□□□□ -1.02
DDX54-206ENST00000549271 TSC22D2O75157 780 aa8.71□□□□□ -1.02
DDX54-206ENST00000549271 DEFB1P60022 68 aa8.71□□□□□ -1.02
DDX54-206ENST00000549271 NUTF2P61970 127 aaKnown RBP8.71□□□□□ -1.02
DDX54-206ENST00000549271 RRAS2P62070 204 aaPredicted RBP8.71□□□□□ -1.02
DDX54-206ENST00000549271 SNRPD3P62318 126 aaKnown RBP8.71□□□□□ -1.02
DDX54-206ENST00000549271 C12orf74Q32Q52 190 aa8.71□□□□□ -1.02
DDX54-206ENST00000549271 C1orf134Q5TEV5 83 aa8.71□□□□□ -1.02
DDX54-206ENST00000549271 CYP2G1PQ6ZSU1 146 aa8.71□□□□□ -1.02
DDX54-206ENST00000549271 OR8I2Q8N0Y5 310 aa8.71□□□□□ -1.02
DDX54-206ENST00000549271 BPIFCQ8NFQ6 507 aa8.71□□□□□ -1.02
DDX54-206ENST00000549271 NEU1Q99519 415 aa8.71□□□□□ -1.02
DDX54-206ENST00000549271 NDUFAF3Q9BU61 184 aa8.71□□□□□ -1.02
DDX54-206ENST00000549271 CLEC5AQ9NY25 188 aa8.71□□□□□ -1.02
DDX54-206ENST00000549271 SLC45A2Q9UMX9 530 aa8.71□□□□□ -1.02
DDX54-206ENST00000549271 DEFB131BA0A096LNP1 70 aa8.7□□□□□ -1.02
DDX54-206ENST00000549271 SMCO3A2RU48 225 aa8.7□□□□□ -1.02
DDX54-206ENST00000549271 FNDC10F2Z333 226 aa8.7□□□□□ -1.02
DDX54-206ENST00000549271 UPK1BO75841 260 aa8.7□□□□□ -1.02
DDX54-206ENST00000549271 ORM2P19652 201 aa8.7□□□□□ -1.02
DDX54-206ENST00000549271 TNP2Q05952 138 aa8.7□□□□□ -1.02
DDX54-206ENST00000549271 IL15RAQ13261 267 aa8.7□□□□□ -1.02
DDX54-206ENST00000549271 GDF5OSQ5U4N7 250 aa8.7□□□□□ -1.02
DDX54-206ENST00000549271 MZT2BQ6NZ67 158 aa8.7□□□□□ -1.02
DDX54-206ENST00000549271 PPP1R14BQ96C90 147 aa8.7□□□□□ -1.02
DDX54-206ENST00000549271 C2orf50Q96LR7 162 aa8.7□□□□□ -1.02
DDX54-206ENST00000549271 SLC25A32Q9H2D1 315 aa8.7□□□□□ -1.02
DDX54-206ENST00000549271 NPVFQ9HCQ7 196 aa8.7□□□□□ -1.02
DDX54-206ENST00000549271 PTTG2Q9NZH5 202 aa8.7□□□□□ -1.02
DDX54-206ENST00000549271 CELA1Q9UNI1 258 aa8.7□□□□□ -1.02
DDX54-206ENST00000549271 VPS13BQ7Z7G8 4022 aa8.7□□□□□ -1.02
DDX54-206ENST00000549271 SRRM2Q9UQ35 2752 aaKnown RBP8.69□□□□□ -1.02
DDX54-206ENST00000549271 C5orf51A6NDU8 294 aa8.69□□□□□ -1.02
DDX54-206ENST00000549271 FAM25EA8MYX2 175 aa8.69□□□□□ -1.02
DDX54-206ENST00000549271 K7EPK0 472 aa8.69□□□□□ -1.02
DDX54-206ENST00000549271 IL5P05113 134 aa8.69□□□□□ -1.02
DDX54-206ENST00000549271 HLA-DRB4P13762 266 aa8.69□□□□□ -1.02
DDX54-206ENST00000549271 PLP1P60201 277 aa8.69□□□□□ -1.02
DDX54-206ENST00000549271 ZNF846Q147U1 533 aa8.69□□□□□ -1.02
DDX54-206ENST00000549271 ZNF705AQ6ZN79 300 aaPredicted RBP8.69□□□□□ -1.02
DDX54-206ENST00000549271 OR10P1Q8NGE3 313 aa8.69□□□□□ -1.02
DDX54-206ENST00000549271 OR1B1Q8NGR6 318 aa8.69□□□□□ -1.02
DDX54-206ENST00000549271 C20orf173Q96LM9 149 aa8.69□□□□□ -1.02
DDX54-206ENST00000549271 LINC00052Q96N35 136 aa8.69□□□□□ -1.02
DDX54-206ENST00000549271 CLUHP3Q96NS8 147 aa8.69□□□□□ -1.02
DDX54-206ENST00000549271 RSG1Q9BU20 258 aa8.69□□□□□ -1.02
DDX54-206ENST00000549271 SCRT1Q9BWW7 348 aa8.69□□□□□ -1.02
DDX54-206ENST00000549271 HLA-DRB4X5D2U9 266 aa8.69□□□□□ -1.02
DDX54-206ENST00000549271 SMIM9A6NGZ8 99 aa8.68□□□□□ -1.02
DDX54-206ENST00000549271 ZNF705FA8MVS1 300 aaPredicted RBP8.68□□□□□ -1.02
DDX54-206ENST00000549271 ISLRO14498 428 aa8.68□□□□□ -1.02
DDX54-206ENST00000549271 ZNF705DP0CH99 300 aaPredicted RBP8.68□□□□□ -1.02
DDX54-206ENST00000549271 ZNF705BP0CI00 300 aaPredicted RBP8.68□□□□□ -1.02
DDX54-206ENST00000549271 ID1P41134 155 aa8.68□□□□□ -1.02
DDX54-206ENST00000549271 PSMB3P49720 205 aa8.68□□□□□ -1.02
DDX54-206ENST00000549271 SELENOTP62341 195 aa8.68□□□□□ -1.02
DDX54-206ENST00000549271 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.68□□□□□ -1.02
DDX54-206ENST00000549271 PATE2Q6UY27 113 aa8.68□□□□□ -1.02
DDX54-206ENST00000549271 TMEM147Q9BVK8 224 aa8.68□□□□□ -1.02
DDX54-206ENST00000549271 GGACTQ9BVM4 153 aa8.68□□□□□ -1.02
DDX54-206ENST00000549271 SLC25A39Q9BZJ4 359 aaPredicted RBP8.68□□□□□ -1.02
DDX54-206ENST00000549271 SAV1Q9H4B6 383 aaPredicted RBP8.68□□□□□ -1.02
DDX54-206ENST00000549271 SLC25A22Q9H936 323 aa8.68□□□□□ -1.02
DDX54-206ENST00000549271 DOK5Q9P104 306 aa8.68□□□□□ -1.02
DDX54-206ENST00000549271 XCL2Q9UBD3 114 aa8.68□□□□□ -1.02
DDX54-206ENST00000549271 LSM5Q9Y4Y9 91 aaKnown RBP8.68□□□□□ -1.02
DDX54-206ENST00000549271 TMEM189A5PLL7 270 aa8.67□□□□□ -1.02
DDX54-206ENST00000549271 FAM24AA6NFZ4 105 aa8.67□□□□□ -1.02
DDX54-206ENST00000549271 H3BRN7 92 aa8.67□□□□□ -1.02
DDX54-206ENST00000549271 L7N2F9 121 aa8.67□□□□□ -1.02
DDX54-206ENST00000549271 HYPMO75409 117 aa8.67□□□□□ -1.02
DDX54-206ENST00000549271 LINC00869P0C866 280 aa8.67□□□□□ -1.02
DDX54-206ENST00000549271 GALR1P47211 349 aa8.67□□□□□ -1.02
DDX54-206ENST00000549271 VAMP2P63027 116 aa8.67□□□□□ -1.02
DDX54-206ENST00000549271 TEPPQ6URK8 271 aa8.67□□□□□ -1.02
DDX54-206ENST00000549271 FOXI2Q6ZQN5 318 aa8.67□□□□□ -1.02
DDX54-206ENST00000549271 FAM210BQ96KR6 192 aa8.67□□□□□ -1.02
DDX54-206ENST00000549271 SHANK2-AS3Q9BTD1 123 aa8.67□□□□□ -1.02
DDX54-206ENST00000549271 MGAT4CQ9UBM8 478 aa8.67□□□□□ -1.02
DDX54-206ENST00000549271 HIGD1AQ9Y241 93 aa8.67□□□□□ -1.02
DDX54-206ENST00000549271 F6UB75 175 aa8.66□□□□□ -1.02
DDX54-206ENST00000549271 SPART-AS1P0CW21 52 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms