RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 NIPSNAP3BQ9BS92 247 aa12.38□□□□□ -0.43
CHMP1A-205ENST00000548650 TMEM147Q9BVK8 224 aa12.38□□□□□ -0.43
CHMP1A-205ENST00000548650 YTHDF2Q9Y5A9 579 aaKnown RBP12.38□□□□□ -0.43
CHMP1A-205ENST00000548650 PCLOQ9Y6V0 5065 aa12.38□□□□□ -0.43
CHMP1A-205ENST00000548650 TRAV8-2A0A0B4J237 113 aa12.37□□□□□ -0.43
CHMP1A-205ENST00000548650 NDUFB6O95139 128 aa12.37□□□□□ -0.43
CHMP1A-205ENST00000548650 INPP1P49441 399 aa12.37□□□□□ -0.43
CHMP1A-205ENST00000548650 POLR2GP62487 172 aaKnown RBP eCLIP12.37□□□□□ -0.43
CHMP1A-205ENST00000548650 ID3Q02535 119 aa12.37□□□□□ -0.43
CHMP1A-205ENST00000548650 BAK1Q16611 211 aa12.37□□□□□ -0.43
CHMP1A-205ENST00000548650 TMEM144Q7Z5S9 345 aa12.37□□□□□ -0.43
CHMP1A-205ENST00000548650 FAM210BQ96KR6 192 aa12.37□□□□□ -0.43
CHMP1A-205ENST00000548650 C7orf50Q9BRJ6 194 aaKnown RBP12.37□□□□□ -0.43
CHMP1A-205ENST00000548650 NACAE9PAV3 2078 aa12.37□□□□□ -0.43
CHMP1A-205ENST00000548650 A0A1B0GVY2 172 aa12.36□□□□□ -0.43
CHMP1A-205ENST00000548650 PMS2P5A8MQ11 134 aa12.36□□□□□ -0.43
CHMP1A-205ENST00000548650 OXA1LQ15070 435 aa12.36□□□□□ -0.43
CHMP1A-205ENST00000548650 TRIQKQ629K1 86 aa12.36□□□□□ -0.43
CHMP1A-205ENST00000548650 CYP2G1PQ6ZSU1 146 aa12.36□□□□□ -0.43
CHMP1A-205ENST00000548650 IGF2BP2-AS1Q96M15 143 aa12.36□□□□□ -0.43
CHMP1A-205ENST00000548650 SDHCQ99643 169 aaPredicted RBP12.36□□□□□ -0.43
CHMP1A-205ENST00000548650 SHANK2-AS3Q9BTD1 123 aa12.36□□□□□ -0.43
CHMP1A-205ENST00000548650 SLC25A39Q9BZJ4 359 aaPredicted RBP12.36□□□□□ -0.43
CHMP1A-205ENST00000548650 PLA2G2EQ9NZK7 142 aa12.36□□□□□ -0.43
CHMP1A-205ENST00000548650 LINC00854A0A1B0GVQ3 168 aa12.35□□□□□ -0.43
CHMP1A-205ENST00000548650 SMCO3A2RU48 225 aa12.35□□□□□ -0.43
CHMP1A-205ENST00000548650 SSSCA1O60232 199 aa12.35□□□□□ -0.43
CHMP1A-205ENST00000548650 CCNKO75909 580 aa12.35□□□□□ -0.43
CHMP1A-205ENST00000548650 CNN1P51911 297 aaKnown RBP12.35□□□□□ -0.43
CHMP1A-205ENST00000548650 RRN3P1Q2M238 152 aa12.35□□□□□ -0.43
CHMP1A-205ENST00000548650 IGFL4Q6B9Z1 124 aa12.35□□□□□ -0.43
CHMP1A-205ENST00000548650 RNF182Q8N6D2 247 aa12.35□□□□□ -0.43
CHMP1A-205ENST00000548650 OR11H7Q8NGC8 314 aa12.35□□□□□ -0.43
CHMP1A-205ENST00000548650 FLVCR2Q9UPI3 526 aa12.35□□□□□ -0.43
CHMP1A-205ENST00000548650 NAP1L6A6NFF2 107 aa12.34□□□□□ -0.43
CHMP1A-205ENST00000548650 RTL8CO15255 209 aa12.34□□□□□ -0.43
CHMP1A-205ENST00000548650 CRXO43186 299 aaPredicted RBP12.34□□□□□ -0.43
CHMP1A-205ENST00000548650 INSP01308 110 aa12.34□□□□□ -0.43
CHMP1A-205ENST00000548650 LINC00869P0C866 280 aa12.34□□□□□ -0.43
CHMP1A-205ENST00000548650 S100A7P31151 101 aa12.34□□□□□ -0.43
CHMP1A-205ENST00000548650 BTCP35070 178 aa12.34□□□□□ -0.43
CHMP1A-205ENST00000548650 SPINK13Q1W4C9 94 aa12.34□□□□□ -0.43
CHMP1A-205ENST00000548650 PSENENQ9NZ42 101 aa12.34□□□□□ -0.43
CHMP1A-205ENST00000548650 M0R2Z0 102 aa12.33□□□□□ -0.44
CHMP1A-205ENST00000548650 IL5P05113 134 aa12.33□□□□□ -0.44
CHMP1A-205ENST00000548650 OR4E1P0C645 316 aa12.33□□□□□ -0.44
CHMP1A-205ENST00000548650 HTN3P15516 51 aa12.33□□□□□ -0.44
CHMP1A-205ENST00000548650 PLP1P60201 277 aa12.33□□□□□ -0.44
CHMP1A-205ENST00000548650 DLK1P80370 383 aa12.33□□□□□ -0.44
CHMP1A-205ENST00000548650 TMEM14EPQ6UXP3 125 aa12.33□□□□□ -0.44
CHMP1A-205ENST00000548650 BAP18Q8IXM2 172 aa12.33□□□□□ -0.44
CHMP1A-205ENST00000548650 UHRF2Q96PU4 802 aa12.33□□□□□ -0.44
CHMP1A-205ENST00000548650 HIGD1AQ9Y241 93 aa12.33□□□□□ -0.44
CHMP1A-205ENST00000548650 M0R2N4 97 aa12.32□□□□□ -0.44
CHMP1A-205ENST00000548650 DUSP14O95147 198 aaKnown RBP12.32□□□□□ -0.44
CHMP1A-205ENST00000548650 IL7P13232 177 aa12.32□□□□□ -0.44
CHMP1A-205ENST00000548650 RPL7P18124 248 aaKnown RBP12.32□□□□□ -0.44
CHMP1A-205ENST00000548650 RAP2BP61225 183 aa12.32□□□□□ -0.44
CHMP1A-205ENST00000548650 RRAS2P62070 204 aaPredicted RBP12.32□□□□□ -0.44
CHMP1A-205ENST00000548650 LGALS9BQ3B8N2 356 aa12.32□□□□□ -0.44
CHMP1A-205ENST00000548650 ZNF738Q8NE65 137 aa12.32□□□□□ -0.44
CHMP1A-205ENST00000548650 SMIM8Q96KF7 97 aa12.32□□□□□ -0.44
CHMP1A-205ENST00000548650 TMEM208Q9BTX3 173 aa12.32□□□□□ -0.44
CHMP1A-205ENST00000548650 A0A087X0K7 114 aa12.31□□□□□ -0.44
CHMP1A-205ENST00000548650 A6NHS1 94 aa12.31□□□□□ -0.44
CHMP1A-205ENST00000548650 K7EPK0 472 aa12.31□□□□□ -0.44
CHMP1A-205ENST00000548650 HYPMO75409 117 aa12.31□□□□□ -0.44
CHMP1A-205ENST00000548650 IFNA21P01568 189 aa12.31□□□□□ -0.44
CHMP1A-205ENST00000548650 METTL15P1P0C7V9 234 aa12.31□□□□□ -0.44
CHMP1A-205ENST00000548650 ANXA7P20073 488 aaKnown RBP12.31□□□□□ -0.44
CHMP1A-205ENST00000548650 DAD1P61803 113 aa12.31□□□□□ -0.44
CHMP1A-205ENST00000548650 SELENOTP62341 195 aa12.31□□□□□ -0.44
CHMP1A-205ENST00000548650 FGL1Q08830 312 aa12.31□□□□□ -0.44
CHMP1A-205ENST00000548650 TMEM88Q6PEY1 159 aa12.31□□□□□ -0.44
CHMP1A-205ENST00000548650 UBE2DNLQ8IWF7 75 aa12.31□□□□□ -0.44
CHMP1A-205ENST00000548650 RCL1Q9Y2P8 373 aaKnown RBP12.31□□□□□ -0.44
CHMP1A-205ENST00000548650 PRSS29PA6NIE9 313 aa12.3□□□□□ -0.44
CHMP1A-205ENST00000548650 ZNF705GA8MUZ8 300 aaPredicted RBP12.3□□□□□ -0.44
CHMP1A-205ENST00000548650 FNDC10F2Z333 226 aa12.3□□□□□ -0.44
CHMP1A-205ENST00000548650 BOLA2-SMG1P6H3BVE0 249 aa12.3□□□□□ -0.44
CHMP1A-205ENST00000548650 PRM2P04554 102 aa12.3□□□□□ -0.44
CHMP1A-205ENST00000548650 OR5G3P0C626 314 aa12.3□□□□□ -0.44
CHMP1A-205ENST00000548650 CXCL3P19876 107 aa12.3□□□□□ -0.44
CHMP1A-205ENST00000548650 SLC38A11Q08AI6 406 aa12.3□□□□□ -0.44
CHMP1A-205ENST00000548650 CNPY1Q3B7I2 92 aa12.3□□□□□ -0.44
CHMP1A-205ENST00000548650 C4orf46Q504U0 113 aa12.3□□□□□ -0.44
CHMP1A-205ENST00000548650 Q6ZR54 194 aa12.3□□□□□ -0.44
CHMP1A-205ENST00000548650 DNAH11Q96DT5 4516 aa12.3□□□□□ -0.44
CHMP1A-205ENST00000548650 IGLV2-18A0A075B6J9 118 aa12.29□□□□□ -0.44
CHMP1A-205ENST00000548650 PLAC8L1A1L4L8 177 aa12.29□□□□□ -0.44
CHMP1A-205ENST00000548650 MRPS12O15235 138 aaKnown RBP12.29□□□□□ -0.44
CHMP1A-205ENST00000548650 TSC22D2O75157 780 aa12.29□□□□□ -0.44
CHMP1A-205ENST00000548650 SCGB1D2O95969 90 aa12.29□□□□□ -0.44
CHMP1A-205ENST00000548650 IAH1Q2TAA2 248 aaPredicted RBP12.29□□□□□ -0.44
CHMP1A-205ENST00000548650 PATE2Q6UY27 113 aa12.29□□□□□ -0.44
CHMP1A-205ENST00000548650 ZBTB8BQ8NAP8 495 aaPredicted RBP12.29□□□□□ -0.44
CHMP1A-205ENST00000548650 PKD1P98161 4303 aa12.29□□□□□ -0.44
CHMP1A-205ENST00000548650 DYNC1H1Q14204 4646 aaKnown RBP12.28□□□□□ -0.44
CHMP1A-205ENST00000548650 TRAV12-2A0A075B6T6 113 aa12.28□□□□□ -0.44
CHMP1A-205ENST00000548650 LYRM9A8MSI8 78 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms