RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 PPP1R1AQ13522 171 aa14.43□□□□□ -0.1
SSH1-207ENST00000547862 TMEM182Q6ZP80 229 aaPredicted RBP14.43□□□□□ -0.1
SSH1-207ENST00000547862 BAP18Q8IXM2 172 aa14.43□□□□□ -0.1
SSH1-207ENST00000547862 IGF2BP2-AS1Q96M15 143 aa14.43□□□□□ -0.1
SSH1-207ENST00000547862 CIB3Q96Q77 187 aaPredicted RBP14.43□□□□□ -0.1
SSH1-207ENST00000547862 PRSS46E5RG02 174 aa14.42□□□□□ -0.1
SSH1-207ENST00000547862 AP3S2P59780 193 aa14.42□□□□□ -0.1
SSH1-207ENST00000547862 AMTNQ6UX39 209 aa14.42□□□□□ -0.1
SSH1-207ENST00000547862 ZNF575Q86XF7 245 aa14.42□□□□□ -0.1
SSH1-207ENST00000547862 ZNF738Q8NE65 137 aa14.42□□□□□ -0.1
SSH1-207ENST00000547862 OR11H7Q8NGC8 314 aa14.42□□□□□ -0.1
SSH1-207ENST00000547862 C17orf77Q96MU5 243 aa14.42□□□□□ -0.1
SSH1-207ENST00000547862 SOSTQ9BQB4 213 aa14.42□□□□□ -0.1
SSH1-207ENST00000547862 BCL7BQ9BQE9 202 aa14.42□□□□□ -0.1
SSH1-207ENST00000547862 TMED3Q9Y3Q3 217 aa14.42□□□□□ -0.1
SSH1-207ENST00000547862 MUC4Q99102 2169 aa14.41□□□□□ -0.1
SSH1-207ENST00000547862 SFT2D2O95562 160 aa14.41□□□□□ -0.1
SSH1-207ENST00000547862 CFDP00746 253 aaPredicted RBP14.41□□□□□ -0.1
SSH1-207ENST00000547862 SLC25A6P12236 298 aa14.41□□□□□ -0.1
SSH1-207ENST00000547862 OXA1LQ15070 435 aa14.41□□□□□ -0.1
SSH1-207ENST00000547862 Q6ZR54 194 aa14.41□□□□□ -0.1
SSH1-207ENST00000547862 DYNC1H1Q14204 4646 aaKnown RBP14.41□□□□□ -0.1
SSH1-207ENST00000547862 TRAV12-2A0A075B6T6 113 aa14.4□□□□□ -0.1
SSH1-207ENST00000547862 DEFB130BP0DP73 79 aa14.4□□□□□ -0.1
SSH1-207ENST00000547862 DEFB130AP0DP74 79 aa14.4□□□□□ -0.1
SSH1-207ENST00000547862 SOHLH1Q5JUK2 328 aa14.4□□□□□ -0.1
SSH1-207ENST00000547862 LRTM2Q8N967 370 aa14.4□□□□□ -0.1
SSH1-207ENST00000547862 ATG101Q9BSB4 218 aa14.4□□□□□ -0.1
SSH1-207ENST00000547862 SLC25A39Q9BZJ4 359 aaPredicted RBP14.4□□□□□ -0.1
SSH1-207ENST00000547862 SLC45A2Q9UMX9 530 aa14.4□□□□□ -0.1
SSH1-207ENST00000547862 STRAPQ9Y3F4 350 aaKnown RBP14.4□□□□□ -0.1
SSH1-207ENST00000547862 TRAV8-2A0A0B4J237 113 aa14.39□□□□□ -0.11
SSH1-207ENST00000547862 H3BRN7 92 aa14.39□□□□□ -0.11
SSH1-207ENST00000547862 DUSP14O95147 198 aaKnown RBP14.39□□□□□ -0.11
SSH1-207ENST00000547862 RNF212Q495C1 297 aa14.39□□□□□ -0.11
SSH1-207ENST00000547862 GPR82Q96P67 336 aa14.39□□□□□ -0.11
SSH1-207ENST00000547862 V9GYH0 126 aa14.39□□□□□ -0.11
SSH1-207ENST00000547862 A8MTW9 85 aa14.38□□□□□ -0.11
SSH1-207ENST00000547862 RAP2BP61225 183 aa14.38□□□□□ -0.11
SSH1-207ENST00000547862 HIST1H1AQ02539 215 aaPredicted RBP14.38□□□□□ -0.11
SSH1-207ENST00000547862 C1orf134Q5TEV5 83 aa14.38□□□□□ -0.11
SSH1-207ENST00000547862 CYP2G1PQ6ZSU1 146 aa14.38□□□□□ -0.11
SSH1-207ENST00000547862 HIGD1AQ9Y241 93 aa14.38□□□□□ -0.11
SSH1-207ENST00000547862 DNAH11Q96DT5 4516 aa14.38□□□□□ -0.11
SSH1-207ENST00000547862 BOLA2-SMG1P6H3BVE0 249 aa14.37□□□□□ -0.11
SSH1-207ENST00000547862 CRXO43186 299 aaPredicted RBP14.37□□□□□ -0.11
SSH1-207ENST00000547862 SSSCA1O60232 199 aa14.37□□□□□ -0.11
SSH1-207ENST00000547862 ADAP1O75689 374 aa14.37□□□□□ -0.11
SSH1-207ENST00000547862 IL5P05113 134 aa14.37□□□□□ -0.11
SSH1-207ENST00000547862 OR5G3P0C626 314 aa14.37□□□□□ -0.11
SSH1-207ENST00000547862 S100A7P31151 101 aa14.37□□□□□ -0.11
SSH1-207ENST00000547862 RRAS2P62070 204 aaPredicted RBP14.37□□□□□ -0.11
SSH1-207ENST00000547862 POLR2GP62487 172 aaKnown RBP eCLIP14.37□□□□□ -0.11
SSH1-207ENST00000547862 RHOBP62745 196 aa14.37□□□□□ -0.11
SSH1-207ENST00000547862 FCN2Q15485 313 aa14.37□□□□□ -0.11
SSH1-207ENST00000547862 C15orf53Q8NAA6 179 aa14.37□□□□□ -0.11
SSH1-207ENST00000547862 OR4D5Q8NGN0 318 aa14.37□□□□□ -0.11
SSH1-207ENST00000547862 UHRF2Q96PU4 802 aa14.37□□□□□ -0.11
SSH1-207ENST00000547862 SLC25A21Q9BQT8 299 aaPredicted RBP14.37□□□□□ -0.11
SSH1-207ENST00000547862 F5H768 121 aa14.36□□□□□ -0.11
SSH1-207ENST00000547862 CCNKO75909 580 aa14.36□□□□□ -0.11
SSH1-207ENST00000547862 NUDT3O95989 172 aa14.36□□□□□ -0.11
SSH1-207ENST00000547862 LINC00869P0C866 280 aa14.36□□□□□ -0.11
SSH1-207ENST00000547862 PPP1R14DQ9NXH3 145 aa14.36□□□□□ -0.11
SSH1-207ENST00000547862 PSENENQ9NZ42 101 aa14.36□□□□□ -0.11
SSH1-207ENST00000547862 CCDC160A6NGH7 325 aa14.35□□□□□ -0.11
SSH1-207ENST00000547862 LYRM9A8MSI8 78 aa14.35□□□□□ -0.11
SSH1-207ENST00000547862 SCGB1D2O95969 90 aa14.35□□□□□ -0.11
SSH1-207ENST00000547862 HTN1P15515 57 aa14.35□□□□□ -0.11
SSH1-207ENST00000547862 TMEM144Q7Z5S9 345 aa14.35□□□□□ -0.11
SSH1-207ENST00000547862 SHANK2-AS3Q9BTD1 123 aa14.35□□□□□ -0.11
SSH1-207ENST00000547862 RPL7P18124 248 aaKnown RBP14.34□□□□□ -0.11
SSH1-207ENST00000547862 AZU1P20160 251 aa14.34□□□□□ -0.11
SSH1-207ENST00000547862 LRRC20Q8TCA0 184 aa14.34□□□□□ -0.11
SSH1-207ENST00000547862 LINC01587Q99440 93 aa14.34□□□□□ -0.11
SSH1-207ENST00000547862 HYPMO75409 117 aa14.33□□□□□ -0.12
SSH1-207ENST00000547862 S100A5P33763 92 aa14.33□□□□□ -0.12
SSH1-207ENST00000547862 SNRPCP09234 159 aaKnown RBP14.32□□□□□ -0.12
SSH1-207ENST00000547862 SLC38A11Q08AI6 406 aa14.32□□□□□ -0.12
SSH1-207ENST00000547862 OR8A1Q8NGG7 326 aa14.32□□□□□ -0.12
SSH1-207ENST00000547862 ARL6Q9H0F7 186 aa14.32□□□□□ -0.12
SSH1-207ENST00000547862 PLAC8L1A1L4L8 177 aa14.31□□□□□ -0.12
SSH1-207ENST00000547862 C9orf170A2RU37 121 aa14.31□□□□□ -0.12
SSH1-207ENST00000547862 METTL15P1P0C7V9 234 aa14.31□□□□□ -0.12
SSH1-207ENST00000547862 INPP1P49441 399 aa14.31□□□□□ -0.12
SSH1-207ENST00000547862 B2MP61769 119 aa14.31□□□□□ -0.12
SSH1-207ENST00000547862 FLVCR2Q9UPI3 526 aa14.31□□□□□ -0.12
SSH1-207ENST00000547862 LINC00854A0A1B0GVQ3 168 aa14.3□□□□□ -0.12
SSH1-207ENST00000547862 ATP5G1P05496 136 aa14.3□□□□□ -0.12
SSH1-207ENST00000547862 CXCL3P19876 107 aa14.3□□□□□ -0.12
SSH1-207ENST00000547862 ANXA7P20073 488 aaKnown RBP14.3□□□□□ -0.12
SSH1-207ENST00000547862 TSPOP30536 169 aa14.3□□□□□ -0.12
SSH1-207ENST00000547862 ATP5G3P48201 142 aa14.3□□□□□ -0.12
SSH1-207ENST00000547862 TNP2Q05952 138 aa14.3□□□□□ -0.12
SSH1-207ENST00000547862 MGAT4CQ9UBM8 478 aa14.3□□□□□ -0.12
SSH1-207ENST00000547862 A0A087X0K7 114 aa14.29□□□□□ -0.12
SSH1-207ENST00000547862 PMS2P5A8MQ11 134 aa14.29□□□□□ -0.12
SSH1-207ENST00000547862 ID3Q02535 119 aa14.29□□□□□ -0.12
SSH1-207ENST00000547862 PSG3Q16557 428 aa14.29□□□□□ -0.12
SSH1-207ENST00000547862 RPUSD4Q96CM3 377 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 213 ms